RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 SFRP2Q96HF1 295 aa0.29□□□□□ -2.36
NUP98-218ENST00000530516 NMNAT3Q96T66 252 aa0.29□□□□□ -2.36
NUP98-218ENST00000530516 SIKE1Q9BRV8 207 aa0.29□□□□□ -2.36
NUP98-218ENST00000530516 TTTY13Q9BZ97 58 aa0.29□□□□□ -2.36
NUP98-218ENST00000530516 ABCC12Q96J65 1359 aa0.29□□□□□ -2.36
NUP98-218ENST00000530516 RALGAPA2Q2PPJ7 1873 aa0.29□□□□□ -2.36
NUP98-218ENST00000530516 TRAV38-1A0A0B4J264 116 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 A0A0D9SEW6 157 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 MEIS3P1A6NDR6 274 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 GOLGA6L10A6NI86 522 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 ZNF879B4DU55 563 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 C9JCJ5 164 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 H7C2G1 150 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 ATP8B1O43520 1251 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 ORC5O43913 435 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 NPPAP01160 153 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 ATP5G1P05496 136 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 LGALS1P09382 135 aaKnown RBP0.28□□□□□ -2.36
NUP98-218ENST00000530516 MIPP30301 263 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 CCR2P41597 374 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 CDK9P50750 372 aaKnown RBP0.28□□□□□ -2.36
NUP98-218ENST00000530516 AQP4P55087 323 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 FABP5Q01469 135 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 EMX1Q04741 257 aaPredicted RBP0.28□□□□□ -2.36
NUP98-218ENST00000530516 LRRC26Q2I0M4 334 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 PLPPR5Q32ZL2 321 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 FAM45BPQ6NSW5 357 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 GID4Q8IVV7 300 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 BLIDQ8IZY5 108 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 DYNAPQ8N1N2 210 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 RNASE6Q93091 150 aaKnown RBP0.28□□□□□ -2.36
NUP98-218ENST00000530516 C12orf43Q96C57 262 aaKnown RBP0.28□□□□□ -2.36
NUP98-218ENST00000530516 ZNF514Q96K75 400 aaPredicted RBP0.28□□□□□ -2.36
NUP98-218ENST00000530516 RBP7Q96R05 134 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 CHST6Q9GZX3 395 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 XAGE1AQ9HD64 81 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 HDGFL3Q9Y3E1 203 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 C22orf24Q9Y442 160 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 PCYT1BQ9Y5K3 369 aaPredicted RBP0.28□□□□□ -2.36
NUP98-218ENST00000530516 A0A1W2PP64 1363 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 TMEM94Q12767 1356 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 DENND4CQ5VZ89 1909 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 CEP192Q8TEP8 1941 aa0.28□□□□□ -2.36
NUP98-218ENST00000530516 COL4A5P29400 1685 aa0.27□□□□□ -2.37
NUP98-218ENST00000530516 PEAK1Q9H792 1746 aa0.27□□□□□ -2.37
NUP98-218ENST00000530516 TEX50A0A1B0GTY4 177 aa0.27□□□□□ -2.37
NUP98-218ENST00000530516 OR51F1A6NGY5 319 aa0.27□□□□□ -2.37
NUP98-218ENST00000530516 GEMIN2O14893 280 aaKnown RBP0.27□□□□□ -2.37
NUP98-218ENST00000530516 STX10O60499 249 aa0.27□□□□□ -2.37
NUP98-218ENST00000530516 HLA-DQB2P05538 268 aa0.27□□□□□ -2.37
NUP98-218ENST00000530516 MSMBP08118 114 aa0.27□□□□□ -2.37
NUP98-218ENST00000530516 RPL28P46779 137 aaKnown RBP0.27□□□□□ -2.37
NUP98-218ENST00000530516 REG1BP48304 166 aa0.27□□□□□ -2.37
NUP98-218ENST00000530516 ETV1P50549 477 aa0.27□□□□□ -2.37
NUP98-218ENST00000530516 SLAMF1Q13291 335 aa0.27□□□□□ -2.37
NUP98-218ENST00000530516 GNA13Q14344 377 aa0.27□□□□□ -2.37
NUP98-218ENST00000530516 NDUFA5Q16718 116 aa0.27□□□□□ -2.37
NUP98-218ENST00000530516 ACSM3Q53FZ2 586 aa0.27□□□□□ -2.37
NUP98-218ENST00000530516 C10orf55Q5SWW7 151 aa0.27□□□□□ -2.37
NUP98-218ENST00000530516 COPS6Q7L5N1 327 aa0.27□□□□□ -2.37
NUP98-218ENST00000530516 KRTAP19-3Q7Z4W3 81 aa0.27□□□□□ -2.37
NUP98-218ENST00000530516 OR10D3Q8NH80 312 aa0.27□□□□□ -2.37
NUP98-218ENST00000530516 C19orf60Q96EN9 201 aa0.27□□□□□ -2.37
NUP98-218ENST00000530516 IMMP2LQ96T52 175 aa0.27□□□□□ -2.37
NUP98-218ENST00000530516 MRPL57Q9BQC6 102 aaKnown RBP0.27□□□□□ -2.37
NUP98-218ENST00000530516 MROQ9BYG7 248 aa0.27□□□□□ -2.37
NUP98-218ENST00000530516 ZNHIT6Q9NWK9 470 aaKnown RBP0.27□□□□□ -2.37
NUP98-218ENST00000530516 C1orf109Q9NX04 203 aa0.27□□□□□ -2.37
NUP98-218ENST00000530516 RBM7Q9Y580 266 aaKnown RBP0.27□□□□□ -2.37
NUP98-218ENST00000530516 SNURFQ9Y675 71 aa0.27□□□□□ -2.37
NUP98-218ENST00000530516 KIF13BQ9NQT8 1826 aa0.27□□□□□ -2.37
NUP98-218ENST00000530516 C5orf49A4QMS7 147 aa0.26□□□□□ -2.37
NUP98-218ENST00000530516 CCRL2O00421 344 aa0.26□□□□□ -2.37
NUP98-218ENST00000530516 KRT75O95678 551 aa0.26□□□□□ -2.37
NUP98-218ENST00000530516 TPM1P09493 284 aa0.26□□□□□ -2.37
NUP98-218ENST00000530516 CD40LGP29965 261 aa0.26□□□□□ -2.37
NUP98-218ENST00000530516 KDELR2P33947 212 aa0.26□□□□□ -2.37
NUP98-218ENST00000530516 SLCO1A2P46721 670 aa0.26□□□□□ -2.37
NUP98-218ENST00000530516 HAAOP46952 286 aa0.26□□□□□ -2.37
NUP98-218ENST00000530516 RAB14P61106 215 aa0.26□□□□□ -2.37
NUP98-218ENST00000530516 RPS24P62847 133 aaKnown RBP0.26□□□□□ -2.37
NUP98-218ENST00000530516 HPCAP84074 193 aa0.26□□□□□ -2.37
NUP98-218ENST00000530516 SMAGPQ0VAQ4 97 aa0.26□□□□□ -2.37
NUP98-218ENST00000530516 ZNHIT3Q15649 155 aaPredicted RBP0.26□□□□□ -2.37
NUP98-218ENST00000530516 KRTAP21-1Q3LI58 79 aa0.26□□□□□ -2.37
NUP98-218ENST00000530516 DNAL1Q4LDG9 190 aa0.26□□□□□ -2.37
NUP98-218ENST00000530516 FAM173BQ6P4H8 233 aa0.26□□□□□ -2.37
NUP98-218ENST00000530516 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.26□□□□□ -2.37
NUP98-218ENST00000530516 SPATA24Q86W54 205 aa0.26□□□□□ -2.37
NUP98-218ENST00000530516 CRLF3Q8IUI8 442 aa0.26□□□□□ -2.37
NUP98-218ENST00000530516 UMODL1-AS1Q8N2C9 162 aa0.26□□□□□ -2.37
NUP98-218ENST00000530516 RPP25LQ8N5L8 163 aaKnown RBP0.26□□□□□ -2.37
NUP98-218ENST00000530516 C12orf29Q8N999 325 aa0.26□□□□□ -2.37
NUP98-218ENST00000530516 ZNF439Q8NDP4 499 aa0.26□□□□□ -2.37
NUP98-218ENST00000530516 PPCDCQ96CD2 204 aa0.26□□□□□ -2.37
NUP98-218ENST00000530516 ANKRD36BP1Q96IX9 119 aa0.26□□□□□ -2.37
NUP98-218ENST00000530516 OR52A5Q9H2C5 316 aa0.26□□□□□ -2.37
NUP98-218ENST00000530516 AGPAT3Q9NRZ7 376 aa0.26□□□□□ -2.37
NUP98-218ENST00000530516 CHMP5Q9NZZ3 219 aa0.26□□□□□ -2.37
NUP98-218ENST00000530516 MCM3APO60318 1980 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms