RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 CRYGCP07315 174 aa8.47□□□□□ -1.05
AMBRA1-207ENST00000529553 UBBP0CG47 229 aa8.47□□□□□ -1.05
AMBRA1-207ENST00000529553 HIST1H1BP16401 226 aaKnown RBP8.47□□□□□ -1.05
AMBRA1-207ENST00000529553 Q499Y3 187 aa8.47□□□□□ -1.05
AMBRA1-207ENST00000529553 UNQ9165/PRO28630Q6UXU0 137 aa8.47□□□□□ -1.05
AMBRA1-207ENST00000529553 Q6ZR54 194 aa8.47□□□□□ -1.05
AMBRA1-207ENST00000529553 MMD2Q8IY49 270 aa8.47□□□□□ -1.05
AMBRA1-207ENST00000529553 OSR1Q8TAX0 266 aaPredicted RBP8.47□□□□□ -1.05
AMBRA1-207ENST00000529553 SETD6Q8TBK2 473 aa8.47□□□□□ -1.05
AMBRA1-207ENST00000529553 CXorf58Q96LI9 332 aa8.47□□□□□ -1.05
AMBRA1-207ENST00000529553 Q96MT0 163 aa8.47□□□□□ -1.05
AMBRA1-207ENST00000529553 FANCD2OSQ96PS1 177 aa8.47□□□□□ -1.05
AMBRA1-207ENST00000529553 ZNF430Q9H8G1 570 aaPredicted RBP8.47□□□□□ -1.05
AMBRA1-207ENST00000529553 MRPS18AQ9NVS2 196 aaKnown RBP8.47□□□□□ -1.05
AMBRA1-207ENST00000529553 APOBP04114 4563 aaKnown RBP8.47□□□□□ -1.05
AMBRA1-207ENST00000529553 DEFB4AO15263 64 aa8.46□□□□□ -1.06
AMBRA1-207ENST00000529553 GYG2O15488 501 aa8.46□□□□□ -1.06
AMBRA1-207ENST00000529553 IGHV3-23P01764 117 aa8.46□□□□□ -1.06
AMBRA1-207ENST00000529553 AMBPP02760 352 aa8.46□□□□□ -1.06
AMBRA1-207ENST00000529553 HLA-DMBP28068 263 aa8.46□□□□□ -1.06
AMBRA1-207ENST00000529553 SERPINB10P48595 397 aa8.46□□□□□ -1.06
AMBRA1-207ENST00000529553 HLA-DRB3P79483 266 aa8.46□□□□□ -1.06
AMBRA1-207ENST00000529553 TMEM187Q14656 261 aa8.46□□□□□ -1.06
AMBRA1-207ENST00000529553 CDK10Q15131 360 aa8.46□□□□□ -1.06
AMBRA1-207ENST00000529553 DNAL1Q4LDG9 190 aa8.46□□□□□ -1.06
AMBRA1-207ENST00000529553 YIF1BQ5BJH7 314 aa8.46□□□□□ -1.06
AMBRA1-207ENST00000529553 XAF1Q6GPH4 301 aa8.46□□□□□ -1.06
AMBRA1-207ENST00000529553 SMIM19Q96E16 107 aa8.46□□□□□ -1.06
AMBRA1-207ENST00000529553 ADTRPQ96IZ2 230 aa8.46□□□□□ -1.06
AMBRA1-207ENST00000529553 ZNF436Q9C0F3 470 aaPredicted RBP8.46□□□□□ -1.06
AMBRA1-207ENST00000529553 SLC2A9Q9NRM0 540 aa8.46□□□□□ -1.06
AMBRA1-207ENST00000529553 SDHAF2Q9NX18 166 aa8.46□□□□□ -1.06
AMBRA1-207ENST00000529553 RDH8Q9NYR8 311 aa8.46□□□□□ -1.06
AMBRA1-207ENST00000529553 POMPQ9Y244 141 aa8.46□□□□□ -1.06
AMBRA1-207ENST00000529553 TRBV5-7A0A0A0MS05 114 aa8.45□□□□□ -1.06
AMBRA1-207ENST00000529553 DPPA5A6NC42 116 aa8.45□□□□□ -1.06
AMBRA1-207ENST00000529553 C16orf90A8MZG2 172 aa8.45□□□□□ -1.06
AMBRA1-207ENST00000529553 TEX22C9J3V5 150 aa8.45□□□□□ -1.06
AMBRA1-207ENST00000529553 ATP5HO75947 161 aa8.45□□□□□ -1.06
AMBRA1-207ENST00000529553 LIMS3P0CW19 117 aa8.45□□□□□ -1.06
AMBRA1-207ENST00000529553 LIMS4P0CW20 117 aa8.45□□□□□ -1.06
AMBRA1-207ENST00000529553 HTR2CP28335 458 aa8.45□□□□□ -1.06
AMBRA1-207ENST00000529553 RPS27AP62979 156 aaKnown RBP8.45□□□□□ -1.06
AMBRA1-207ENST00000529553 IRF3Q14653 427 aa8.45□□□□□ -1.06
AMBRA1-207ENST00000529553 IDO2Q6ZQW0 420 aa8.45□□□□□ -1.06
AMBRA1-207ENST00000529553 CEACAM19Q7Z692 300 aa8.45□□□□□ -1.06
AMBRA1-207ENST00000529553 APRG1Q8IVJ8 170 aa8.45□□□□□ -1.06
AMBRA1-207ENST00000529553 NKAIN3Q8N8D7 197 aa8.45□□□□□ -1.06
AMBRA1-207ENST00000529553 Q8NAQ8 132 aa8.45□□□□□ -1.06
AMBRA1-207ENST00000529553 OR52I1Q8NGK6 324 aa8.45□□□□□ -1.06
AMBRA1-207ENST00000529553 FYTTD1Q96QD9 318 aaKnown RBP8.45□□□□□ -1.06
AMBRA1-207ENST00000529553 Q9N2K0 584 aa8.45□□□□□ -1.06
AMBRA1-207ENST00000529553 SCRT2Q9NQ03 307 aa8.45□□□□□ -1.06
AMBRA1-207ENST00000529553 DAZ1Q9NQZ3 744 aaKnown RBP8.45□□□□□ -1.06
AMBRA1-207ENST00000529553 PLEKHJ1Q9NW61 149 aa8.45□□□□□ -1.06
AMBRA1-207ENST00000529553 BABAM2Q9NXR7 383 aa8.45□□□□□ -1.06
AMBRA1-207ENST00000529553 EBAG9O00559 213 aa8.44□□□□□ -1.06
AMBRA1-207ENST00000529553 MRPS14O60783 128 aaKnown RBP8.44□□□□□ -1.06
AMBRA1-207ENST00000529553 GABRB1P18505 474 aa8.44□□□□□ -1.06
AMBRA1-207ENST00000529553 RPS11P62280 158 aaKnown RBP eCLIP8.44□□□□□ -1.06
AMBRA1-207ENST00000529553 TMPRSS11AQ6ZMR5 421 aa8.44□□□□□ -1.06
AMBRA1-207ENST00000529553 Q6ZTC4 211 aa8.44□□□□□ -1.06
AMBRA1-207ENST00000529553 SLC29A1Q99808 456 aa8.44□□□□□ -1.06
AMBRA1-207ENST00000529553 NDUFAF3Q9BU61 184 aa8.44□□□□□ -1.06
AMBRA1-207ENST00000529553 TM2D1Q9BX74 207 aa8.44□□□□□ -1.06
AMBRA1-207ENST00000529553 DNAH5Q8TE73 4624 aa8.44□□□□□ -1.06
AMBRA1-207ENST00000529553 IGKV1-6A0A0C4DH72 117 aa8.43□□□□□ -1.06
AMBRA1-207ENST00000529553 HMX3A6NHT5 357 aa8.43□□□□□ -1.06
AMBRA1-207ENST00000529553 C15orf61A6NNL5 157 aa8.43□□□□□ -1.06
AMBRA1-207ENST00000529553 TRDCB7Z8K6 153 aa8.43□□□□□ -1.06
AMBRA1-207ENST00000529553 K7EMT4 169 aa8.43□□□□□ -1.06
AMBRA1-207ENST00000529553 CRYZL1O95825 349 aa8.43□□□□□ -1.06
AMBRA1-207ENST00000529553 IL6RP08887 468 aaPredicted RBP8.43□□□□□ -1.06
AMBRA1-207ENST00000529553 ZNF735P0CB33 412 aa8.43□□□□□ -1.06
AMBRA1-207ENST00000529553 SAA1P0DJI8 122 aaPredicted RBP8.43□□□□□ -1.06
AMBRA1-207ENST00000529553 FCGR1AP12314 374 aa8.43□□□□□ -1.06
AMBRA1-207ENST00000529553 MIFP14174 115 aa8.43□□□□□ -1.06
AMBRA1-207ENST00000529553 SRMP19623 302 aa8.43□□□□□ -1.06
AMBRA1-207ENST00000529553 MAS1LP35410 378 aa8.43□□□□□ -1.06
AMBRA1-207ENST00000529553 C1orf134Q5TEV5 83 aa8.43□□□□□ -1.06
AMBRA1-207ENST00000529553 LIPKQ5VXJ0 399 aa8.43□□□□□ -1.06
AMBRA1-207ENST00000529553 PLET1Q6UQ28 207 aa8.43□□□□□ -1.06
AMBRA1-207ENST00000529553 AMIGO2Q86SJ2 522 aa8.43□□□□□ -1.06
AMBRA1-207ENST00000529553 RHOXF1Q8NHV9 184 aa8.43□□□□□ -1.06
AMBRA1-207ENST00000529553 TMEM190Q8WZ59 177 aa8.43□□□□□ -1.06
AMBRA1-207ENST00000529553 TMEM59Q9BXS4 323 aa8.43□□□□□ -1.06
AMBRA1-207ENST00000529553 OR2D2Q9H210 308 aa8.43□□□□□ -1.06
AMBRA1-207ENST00000529553 AMBNQ9NP70 447 aa8.43□□□□□ -1.06
AMBRA1-207ENST00000529553 FGF20Q9NP95 211 aaPredicted RBP8.43□□□□□ -1.06
AMBRA1-207ENST00000529553 AP4S1Q9Y587 144 aa8.43□□□□□ -1.06
AMBRA1-207ENST00000529553 S4R3C0 116 aa8.43□□□□□ -1.06
AMBRA1-207ENST00000529553 IGLV11-55A0A075B6I3 123 aa8.42□□□□□ -1.06
AMBRA1-207ENST00000529553 DIRAS3O95661 229 aa8.42□□□□□ -1.06
AMBRA1-207ENST00000529553 CA1P00915 261 aaPredicted RBP8.42□□□□□ -1.06
AMBRA1-207ENST00000529553 IFNA10P01566 189 aa8.42□□□□□ -1.06
AMBRA1-207ENST00000529553 IFNA21P01568 189 aa8.42□□□□□ -1.06
AMBRA1-207ENST00000529553 IFNA17P01571 189 aa8.42□□□□□ -1.06
AMBRA1-207ENST00000529553 CD74P04233 296 aa8.42□□□□□ -1.06
AMBRA1-207ENST00000529553 CTSDP07339 412 aaPredicted RBP8.42□□□□□ -1.06
AMBRA1-207ENST00000529553 RBMY1A1P0DJD3 496 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms