RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 CHST4Q8NCG5 386 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 OR11H7Q8NGC8 314 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 OR4K2Q8NGD2 314 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 OR8D4Q8NGM9 314 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 OR4A4PQ8NGN8 299 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 OR2T4Q8NH00 348 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 OR1P1Q8NH06 330 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 SPPL2BQ8TCT7 592 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 GNPDA2Q8TDQ7 276 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 RXFP4Q8TDU9 374 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 C10orf82Q8WW14 230 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 ARL11Q969Q4 196 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 TMEM230Q96A57 120 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 SLC25A46Q96AG3 418 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 YIPF6Q96EC8 236 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 TP53RKQ96S44 253 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 PSMG3Q9BT73 122 aaPredicted RBP2.27□□□□□ -2.05
CTR9-204ENST00000529355 FAAP24Q9BTP7 215 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 NUDT9Q9BW91 350 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 TMEM126AQ9H061 195 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 LRTM1Q9HBL6 345 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 TAF9BQ9HBM6 251 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 PRSS16Q9NQE7 514 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 TMEM38BQ9NVV0 291 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 TRAPPC2LQ9UL33 140 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 MCTS1Q9ULC4 181 aaKnown RBP2.27□□□□□ -2.05
CTR9-204ENST00000529355 SLC17A4Q9Y2C5 497 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 UFC1Q9Y3C8 167 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 LAMB1P07942 1786 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 SIGLEC1Q9BZZ2 1709 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 MYO18AQ92614 2054 aaKnown RBP2.27□□□□□ -2.05
CTR9-204ENST00000529355 UNC13BO14795 1591 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 SCN8AQ9UQD0 1980 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 ATP7AQ04656 1500 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.27□□□□□ -2.05
CTR9-204ENST00000529355 ATG2AQ2TAZ0 1938 aa2.27□□□□□ -2.05
CTR9-204ENST00000529355 SBF1O95248 1867 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 FOCADQ5VW36 1801 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 RBBP6Q7Z6E9 1792 aaKnown RBP2.26□□□□□ -2.05
CTR9-204ENST00000529355 SPHKAPQ2M3C7 1700 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 CUL7Q14999 1698 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 A0A087WUJ7 227 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 TRAV19A0A0A6YYK7 116 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 KIR2DS1A0A191URI9 304 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 TMEM269A0A1B0GVZ9 245 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 IFITM5A6NNB3 132 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 C15orf65H3BRN8 121 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 MANBAO00462 879 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 PLPP3O14495 311 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 ENTPD6O75354 484 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 CDS2O95674 445 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 HPRT1P00492 218 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 APODP05090 189 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 UBBP0CG47 229 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 MPC1LP0DKB6 136 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 UGT2B7P16662 529 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 ALOX5APP20292 161 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 HTR1DP28221 377 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 IMPA1P29218 277 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 S100A7P31151 101 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 BRS3P32247 399 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 PRLHRP49683 370 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 DLX6P56179 175 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 ARPP19P56211 112 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 RHOAP61586 193 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 EDDM3AQ14507 147 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 KIR2DS1Q14954 304 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 NEDD8Q15843 81 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 IQCJQ1A5X6 159 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 LRRC26Q2I0M4 334 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 IAH1Q2TAA2 248 aaPredicted RBP2.26□□□□□ -2.05
CTR9-204ENST00000529355 ZNF404Q494X3 552 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 TIMM23BQ5SRD1 257 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 C10orf91Q5T1B1 145 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 CST9Q5W186 159 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 CASP12Q6UXS9 341 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 GLT6D1Q7Z4J2 308 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 SNX29P2Q8IUI4 249 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 APRG1Q8IVJ8 170 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 SMIM20Q8N5G0 67 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 LRRC75AQ8NAA5 344 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 OR2Z1Q8NG97 314 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 OR4D11Q8NGI4 311 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 OR2Y1Q8NGV0 311 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 MCFD2Q8NI22 146 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 LYPD6BQ8NI32 183 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 EEF1AKMT1Q8WVE0 214 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 GALMQ96C23 342 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 MRPS24Q96EL2 167 aaKnown RBP2.26□□□□□ -2.05
CTR9-204ENST00000529355 WDR34Q96EX3 536 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 IMP4Q96G21 291 aaKnown RBP2.26□□□□□ -2.05
CTR9-204ENST00000529355 CENPNQ96H22 339 aaPredicted RBP2.26□□□□□ -2.05
CTR9-204ENST00000529355 KCTD7Q96MP8 289 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 GPER1Q99527 375 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 ZNF649Q9BS31 505 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 LINC00470Q9BZP3 86 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 OR8D2Q9GZM6 311 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 EXOSC4Q9NPD3 245 aaKnown RBP2.26□□□□□ -2.05
CTR9-204ENST00000529355 UBQLN4Q9NRR5 601 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 RBFOX1Q9NWB1 397 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms