RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 ADAD2Q8NCV1 583 aaKnown RBP9.91□□□□□ -0.82
CPSF1-204ENST00000529288 OSR1Q8TAX0 266 aaPredicted RBP9.91□□□□□ -0.82
CPSF1-204ENST00000529288 NUDCD2Q8WVJ2 157 aa9.91□□□□□ -0.82
CPSF1-204ENST00000529288 DDB2Q92466 427 aa9.91□□□□□ -0.82
CPSF1-204ENST00000529288 CENPOQ9BU64 300 aa9.91□□□□□ -0.82
CPSF1-204ENST00000529288 ZNF430Q9H8G1 570 aaPredicted RBP9.91□□□□□ -0.82
CPSF1-204ENST00000529288 AKIP1Q9NQ31 210 aa9.91□□□□□ -0.82
CPSF1-204ENST00000529288 C19orf73Q9NVV2 129 aa9.91□□□□□ -0.82
CPSF1-204ENST00000529288 PRELID3BQ9Y3B1 194 aa9.91□□□□□ -0.82
CPSF1-204ENST00000529288 DPPA5A6NC42 116 aa9.9□□□□□ -0.82
CPSF1-204ENST00000529288 IZUMO1RA6ND01 250 aa9.9□□□□□ -0.82
CPSF1-204ENST00000529288 OR2J3O76001 311 aa9.9□□□□□ -0.82
CPSF1-204ENST00000529288 DIRAS3O95661 229 aa9.9□□□□□ -0.82
CPSF1-204ENST00000529288 DTYMKP23919 212 aa9.9□□□□□ -0.82
CPSF1-204ENST00000529288 FGF9P31371 208 aaPredicted RBP9.9□□□□□ -0.82
CPSF1-204ENST00000529288 GNG2P59768 71 aa9.9□□□□□ -0.82
CPSF1-204ENST00000529288 RPL30P62888 115 aaKnown RBP9.9□□□□□ -0.82
CPSF1-204ENST00000529288 CDK10Q15131 360 aa9.9□□□□□ -0.82
CPSF1-204ENST00000529288 LCN12Q6JVE5 192 aa9.9□□□□□ -0.82
CPSF1-204ENST00000529288 VKORC1L1Q8N0U8 176 aa9.9□□□□□ -0.82
CPSF1-204ENST00000529288 ZNF645Q8N7E2 425 aa9.9□□□□□ -0.82
CPSF1-204ENST00000529288 TCTEX1D2Q8WW35 142 aa9.9□□□□□ -0.82
CPSF1-204ENST00000529288 FYTTD1Q96QD9 318 aaKnown RBP9.9□□□□□ -0.82
CPSF1-204ENST00000529288 CITED4Q96RK1 184 aa9.9□□□□□ -0.82
CPSF1-204ENST00000529288 TM2D3Q9BRN9 247 aa9.9□□□□□ -0.82
CPSF1-204ENST00000529288 PEMTQ9UBM1 199 aa9.9□□□□□ -0.82
CPSF1-204ENST00000529288 DAPK2Q9UIK4 370 aa9.9□□□□□ -0.82
CPSF1-204ENST00000529288 SPATA2Q9UM82 520 aa9.9□□□□□ -0.82
CPSF1-204ENST00000529288 MRPS7Q9Y2R9 242 aaKnown RBP9.9□□□□□ -0.82
CPSF1-204ENST00000529288 OR2W1Q9Y3N9 320 aa9.9□□□□□ -0.82
CPSF1-204ENST00000529288 TMEM235A6NFC5 223 aa9.89□□□□□ -0.83
CPSF1-204ENST00000529288 HMX3A6NHT5 357 aa9.89□□□□□ -0.83
CPSF1-204ENST00000529288 NOTOA8MTQ0 251 aa9.89□□□□□ -0.83
CPSF1-204ENST00000529288 CREBL2O60519 120 aaPredicted RBP9.89□□□□□ -0.83
CPSF1-204ENST00000529288 BRI3O95415 125 aa9.89□□□□□ -0.83
CPSF1-204ENST00000529288 CTXN2P0C2S0 81 aa9.89□□□□□ -0.83
CPSF1-204ENST00000529288 CD36P16671 472 aa9.89□□□□□ -0.83
CPSF1-204ENST00000529288 ZNF45Q02386 682 aa9.89□□□□□ -0.83
CPSF1-204ENST00000529288 HAGHQ16775 308 aa9.89□□□□□ -0.83
CPSF1-204ENST00000529288 HACD4Q5VWC8 232 aa9.89□□□□□ -0.83
CPSF1-204ENST00000529288 Q6ZS49 121 aa9.89□□□□□ -0.83
CPSF1-204ENST00000529288 MMD2Q8IY49 270 aa9.89□□□□□ -0.83
CPSF1-204ENST00000529288 Q8N402 240 aa9.89□□□□□ -0.83
CPSF1-204ENST00000529288 DYNLRB2Q8TF09 96 aa9.89□□□□□ -0.83
CPSF1-204ENST00000529288 ISOC1Q96CN7 298 aa9.89□□□□□ -0.83
CPSF1-204ENST00000529288 SPIN2AQ99865 258 aa9.89□□□□□ -0.83
CPSF1-204ENST00000529288 SPIN2BQ9BPZ2 258 aa9.89□□□□□ -0.83
CPSF1-204ENST00000529288 SPATA25Q9BR10 227 aa9.89□□□□□ -0.83
CPSF1-204ENST00000529288 OR51E2Q9H255 320 aa9.89□□□□□ -0.83
CPSF1-204ENST00000529288 TXNL4BQ9NX01 149 aaKnown RBP9.89□□□□□ -0.83
CPSF1-204ENST00000529288 RBMX2Q9Y388 322 aaKnown RBP9.89□□□□□ -0.83
CPSF1-204ENST00000529288 SELENOKQ9Y6D0 94 aa9.89□□□□□ -0.83
CPSF1-204ENST00000529288 IGKV1D-13A0A0B4J2D9 117 aa9.88□□□□□ -0.83
CPSF1-204ENST00000529288 FAM223BA6NKX1 122 aa9.88□□□□□ -0.83
CPSF1-204ENST00000529288 BMPR1BO00238 502 aa9.88□□□□□ -0.83
CPSF1-204ENST00000529288 OR2A4O95047 310 aa9.88□□□□□ -0.83
CPSF1-204ENST00000529288 IGHV3-23P01764 117 aa9.88□□□□□ -0.83
CPSF1-204ENST00000529288 IFNA6P05013 189 aa9.88□□□□□ -0.83
CPSF1-204ENST00000529288 IGKV1-13P0DP09 117 aa9.88□□□□□ -0.83
CPSF1-204ENST00000529288 NEDD8Q15843 81 aa9.88□□□□□ -0.83
CPSF1-204ENST00000529288 CNIH2Q6PI25 160 aa9.88□□□□□ -0.83
CPSF1-204ENST00000529288 C19orf35Q6ZS72 473 aa9.88□□□□□ -0.83
CPSF1-204ENST00000529288 SSX9Q7RTT3 188 aa9.88□□□□□ -0.83
CPSF1-204ENST00000529288 FAM223AQ8IWN6 122 aa9.88□□□□□ -0.83
CPSF1-204ENST00000529288 GPHA2Q96T91 129 aa9.88□□□□□ -0.83
CPSF1-204ENST00000529288 PLEKHA3Q9HB20 300 aa9.88□□□□□ -0.83
CPSF1-204ENST00000529288 TAS2R8Q9NYW2 309 aa9.88□□□□□ -0.83
CPSF1-204ENST00000529288 SSR3Q9UNL2 185 aa9.88□□□□□ -0.83
CPSF1-204ENST00000529288 S4R3C0 116 aa9.88□□□□□ -0.83
CPSF1-204ENST00000529288 SORL1Q92673 2214 aa9.87□□□□□ -0.83
CPSF1-204ENST00000529288 A8MZ25 164 aa9.87□□□□□ -0.83
CPSF1-204ENST00000529288 PPP5D1E7EU14 171 aa9.87□□□□□ -0.83
CPSF1-204ENST00000529288 TNFSF12O43508 249 aa9.87□□□□□ -0.83
CPSF1-204ENST00000529288 HLA-AP01891 365 aaKnown RBP9.87□□□□□ -0.83
CPSF1-204ENST00000529288 HLA-DQB1P01920 261 aa9.87□□□□□ -0.83
CPSF1-204ENST00000529288 FCER2P06734 321 aa9.87□□□□□ -0.83
CPSF1-204ENST00000529288 ARPC4P59998 168 aa9.87□□□□□ -0.83
CPSF1-204ENST00000529288 CD81P60033 236 aa9.87□□□□□ -0.83
CPSF1-204ENST00000529288 MXD1Q05195 221 aa9.87□□□□□ -0.83
CPSF1-204ENST00000529288 GUCA2BQ16661 112 aa9.87□□□□□ -0.83
CPSF1-204ENST00000529288 C15orf32Q32M92 178 aa9.87□□□□□ -0.83
CPSF1-204ENST00000529288 CD300EQ496F6 205 aaPredicted RBP9.87□□□□□ -0.83
CPSF1-204ENST00000529288 SLC25A42Q86VD7 318 aa9.87□□□□□ -0.83
CPSF1-204ENST00000529288 TTC9CQ8N5M4 171 aa9.87□□□□□ -0.83
CPSF1-204ENST00000529288 NECAP1Q8NC96 275 aa9.87□□□□□ -0.83
CPSF1-204ENST00000529288 OR4S2Q8NH73 311 aa9.87□□□□□ -0.83
CPSF1-204ENST00000529288 LGALS14Q8TCE9 139 aa9.87□□□□□ -0.83
CPSF1-204ENST00000529288 OR2A7Q96R45 310 aa9.87□□□□□ -0.83
CPSF1-204ENST00000529288 DCSTAMPQ9H295 470 aa9.87□□□□□ -0.83
CPSF1-204ENST00000529288 RNF167Q9H6Y7 350 aa9.87□□□□□ -0.83
CPSF1-204ENST00000529288 RETNQ9HD89 108 aa9.87□□□□□ -0.83
CPSF1-204ENST00000529288 FBXL7Q9UJT9 491 aa9.87□□□□□ -0.83
CPSF1-204ENST00000529288 DNAH7Q8WXX0 4024 aa9.86□□□□□ -0.83
CPSF1-204ENST00000529288 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.86□□□□□ -0.83
CPSF1-204ENST00000529288 AIREO43918 545 aa9.86□□□□□ -0.83
CPSF1-204ENST00000529288 SSX5O60225 188 aa9.86□□□□□ -0.83
CPSF1-204ENST00000529288 SLC22A5O76082 557 aa9.86□□□□□ -0.83
CPSF1-204ENST00000529288 TPPPO94811 219 aa9.86□□□□□ -0.83
CPSF1-204ENST00000529288 OR2C1O95371 312 aa9.86□□□□□ -0.83
CPSF1-204ENST00000529288 CLEC2LP0C7M8 214 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms