RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 RAX2Q96IS3 184 aa13.11□□□□□ -0.31
HIF3A-211ENST00000528563 UBE2E2Q96LR5 201 aa13.11□□□□□ -0.31
HIF3A-211ENST00000528563 ZNF2Q9BSG1 426 aaPredicted RBP13.11□□□□□ -0.31
HIF3A-211ENST00000528563 DCUN1D5Q9BTE7 237 aa13.11□□□□□ -0.31
HIF3A-211ENST00000528563 CEPT1Q9Y6K0 416 aa13.11□□□□□ -0.31
HIF3A-211ENST00000528563 A0A1W2PN81 502 aa13.1□□□□□ -0.31
HIF3A-211ENST00000528563 CNIH1O95406 144 aa13.1□□□□□ -0.31
HIF3A-211ENST00000528563 RCVRNP35243 200 aa13.1□□□□□ -0.31
HIF3A-211ENST00000528563 CHRNA7P36544 502 aa13.1□□□□□ -0.31
HIF3A-211ENST00000528563 BEAN1Q3B7T3 259 aa13.1□□□□□ -0.31
HIF3A-211ENST00000528563 ACTBL2Q562R1 376 aa13.1□□□□□ -0.31
HIF3A-211ENST00000528563 IDO2Q6ZQW0 420 aa13.1□□□□□ -0.31
HIF3A-211ENST00000528563 OR4S2Q8NH73 311 aa13.1□□□□□ -0.31
HIF3A-211ENST00000528563 CCDC59Q9P031 241 aaKnown RBP13.1□□□□□ -0.31
HIF3A-211ENST00000528563 KLK11Q9UBX7 282 aa13.1□□□□□ -0.31
HIF3A-211ENST00000528563 CCL24O00175 119 aa13.1□□□□□ -0.31
HIF3A-211ENST00000528563 RGS5O15539 181 aa13.1□□□□□ -0.31
HIF3A-211ENST00000528563 TNFSF12O43508 249 aa13.1□□□□□ -0.31
HIF3A-211ENST00000528563 SAA1P0DJI8 122 aaPredicted RBP13.1□□□□□ -0.31
HIF3A-211ENST00000528563 HERV-K104P61576 105 aa13.1□□□□□ -0.31
HIF3A-211ENST00000528563 GNB1P62873 340 aa13.1□□□□□ -0.31
HIF3A-211ENST00000528563 TMEM17Q86X19 198 aa13.1□□□□□ -0.31
HIF3A-211ENST00000528563 LAX1Q8IWV1 398 aa13.1□□□□□ -0.31
HIF3A-211ENST00000528563 OR5M8Q8NGP6 311 aa13.1□□□□□ -0.31
HIF3A-211ENST00000528563 OR52I2Q8NH67 350 aa13.1□□□□□ -0.31
HIF3A-211ENST00000528563 GRPEL2Q8TAA5 225 aa13.1□□□□□ -0.31
HIF3A-211ENST00000528563 C15orf40Q8WUR7 153 aa13.1□□□□□ -0.31
HIF3A-211ENST00000528563 C4orf3Q8WVX3 66 aa13.1□□□□□ -0.31
HIF3A-211ENST00000528563 MTFP1Q9UDX5 166 aa13.1□□□□□ -0.31
HIF3A-211ENST00000528563 RBFOX2O43251 390 aaKnown RBP eCLIP13.09□□□□□ -0.31
HIF3A-211ENST00000528563 IGLL1P15814 213 aa13.09□□□□□ -0.31
HIF3A-211ENST00000528563 KIR2DS2P43631 304 aa13.09□□□□□ -0.31
HIF3A-211ENST00000528563 RUNX1Q01196 453 aa13.09□□□□□ -0.31
HIF3A-211ENST00000528563 VKORC1L1Q8N0U8 176 aa13.09□□□□□ -0.31
HIF3A-211ENST00000528563 BORCS5Q969J3 196 aa13.09□□□□□ -0.31
HIF3A-211ENST00000528563 TMEM68Q96MH6 324 aa13.09□□□□□ -0.31
HIF3A-211ENST00000528563 DUX3Q96PT4 197 aa13.09□□□□□ -0.31
HIF3A-211ENST00000528563 SLIRPQ9GZT3 109 aaKnown RBP13.09□□□□□ -0.31
HIF3A-211ENST00000528563 ZNF430Q9H8G1 570 aaPredicted RBP13.09□□□□□ -0.31
HIF3A-211ENST00000528563 VSIG4Q9Y279 399 aa13.09□□□□□ -0.31
HIF3A-211ENST00000528563 MSGN1A6NI15 193 aa13.08□□□□□ -0.32
HIF3A-211ENST00000528563 I3L521 148 aa13.08□□□□□ -0.32
HIF3A-211ENST00000528563 RAMP3O60896 148 aa13.08□□□□□ -0.32
HIF3A-211ENST00000528563 DEFB136Q30KP8 78 aa13.08□□□□□ -0.32
HIF3A-211ENST00000528563 ASPHD1Q5U4P2 390 aa13.08□□□□□ -0.32
HIF3A-211ENST00000528563 PYHIN1Q6K0P9 492 aa13.08□□□□□ -0.32
HIF3A-211ENST00000528563 SPAG16Q8N0X2 631 aa13.08□□□□□ -0.32
HIF3A-211ENST00000528563 PUSL1Q8N0Z8 303 aaKnown RBP13.08□□□□□ -0.32
HIF3A-211ENST00000528563 CASTOR1Q8WTX7 329 aa13.08□□□□□ -0.32
HIF3A-211ENST00000528563 RCC1LQ96I51 464 aaKnown RBP13.08□□□□□ -0.32
HIF3A-211ENST00000528563 RHOVQ96L33 236 aa13.08□□□□□ -0.32
HIF3A-211ENST00000528563 GNB4Q9HAV0 340 aa13.08□□□□□ -0.32
HIF3A-211ENST00000528563 NOL3O60936 208 aaKnown RBP13.07□□□□□ -0.32
HIF3A-211ENST00000528563 PGLYRP1O75594 196 aaPredicted RBP13.07□□□□□ -0.32
HIF3A-211ENST00000528563 OR2A4O95047 310 aa13.07□□□□□ -0.32
HIF3A-211ENST00000528563 HRASP01112 189 aa13.07□□□□□ -0.32
HIF3A-211ENST00000528563 TSPAN5P62079 268 aa13.07□□□□□ -0.32
HIF3A-211ENST00000528563 VAX1Q5SQQ9 334 aa13.07□□□□□ -0.32
HIF3A-211ENST00000528563 MMD2Q8IY49 270 aa13.07□□□□□ -0.32
HIF3A-211ENST00000528563 OR5T1Q8NG75 326 aa13.07□□□□□ -0.32
HIF3A-211ENST00000528563 FCAMRQ8WWV6 532 aa13.07□□□□□ -0.32
HIF3A-211ENST00000528563 OR2A7Q96R45 310 aa13.07□□□□□ -0.32
HIF3A-211ENST00000528563 CATR1Q13166 79 aa13.06□□□□□ -0.32
HIF3A-211ENST00000528563 FHL3Q13643 280 aa13.06□□□□□ -0.32
HIF3A-211ENST00000528563 TNXAQ16473 311 aa13.06□□□□□ -0.32
HIF3A-211ENST00000528563 RNASE12Q5GAN4 147 aaKnown RBP13.06□□□□□ -0.32
HIF3A-211ENST00000528563 VSTM2AQ8TAG5 236 aa13.06□□□□□ -0.32
HIF3A-211ENST00000528563 TMEM167AQ8TBQ9 72 aa13.06□□□□□ -0.32
HIF3A-211ENST00000528563 MS4A10Q96PG2 267 aa13.06□□□□□ -0.32
HIF3A-211ENST00000528563 AIFM2Q9BRQ8 373 aa13.06□□□□□ -0.32
HIF3A-211ENST00000528563 NXF2Q9GZY0 626 aaKnown RBP13.06□□□□□ -0.32
HIF3A-211ENST00000528563 FXYD6Q9H0Q3 95 aa13.06□□□□□ -0.32
HIF3A-211ENST00000528563 SLA2Q9H6Q3 261 aa13.06□□□□□ -0.32
HIF3A-211ENST00000528563 TGP01266 2768 aa13.05□□□□□ -0.32
HIF3A-211ENST00000528563 GABARAPH6UMI1 98 aa13.05□□□□□ -0.32
HIF3A-211ENST00000528563 M0QYG6 137 aa13.05□□□□□ -0.32
HIF3A-211ENST00000528563 WIPF1O43516 503 aa13.05□□□□□ -0.32
HIF3A-211ENST00000528563 CREBL2O60519 120 aaPredicted RBP13.05□□□□□ -0.32
HIF3A-211ENST00000528563 KBTBD11O94819 623 aa13.05□□□□□ -0.32
HIF3A-211ENST00000528563 BRI3O95415 125 aa13.05□□□□□ -0.32
HIF3A-211ENST00000528563 DUS4LO95620 317 aaKnown RBP13.05□□□□□ -0.32
HIF3A-211ENST00000528563 CD3DP04234 171 aa13.05□□□□□ -0.32
HIF3A-211ENST00000528563 CD40LGP29965 261 aa13.05□□□□□ -0.32
HIF3A-211ENST00000528563 UCP3P55916 312 aa13.05□□□□□ -0.32
HIF3A-211ENST00000528563 AADACL3Q5VUY0 350 aa13.05□□□□□ -0.32
HIF3A-211ENST00000528563 LPCAT3Q6P1A2 487 aa13.05□□□□□ -0.32
HIF3A-211ENST00000528563 OR11H1Q8NG94 326 aa13.05□□□□□ -0.32
HIF3A-211ENST00000528563 OR51H1Q8NH63 302 aa13.05□□□□□ -0.32
HIF3A-211ENST00000528563 CD300LFQ8TDQ1 290 aa13.05□□□□□ -0.32
HIF3A-211ENST00000528563 SRSF12Q8WXF0 261 aaKnown RBP13.05□□□□□ -0.32
HIF3A-211ENST00000528563 DIRAS2Q96HU8 199 aa13.05□□□□□ -0.32
HIF3A-211ENST00000528563 OR5B12Q96R08 314 aa13.05□□□□□ -0.32
HIF3A-211ENST00000528563 RBM38Q9H0Z9 239 aaKnown RBP13.05□□□□□ -0.32
HIF3A-211ENST00000528563 H3BUA1 57 aa13.04□□□□□ -0.32
HIF3A-211ENST00000528563 GPR31O00270 319 aa13.04□□□□□ -0.32
HIF3A-211ENST00000528563 HPRT1P00492 218 aa13.04□□□□□ -0.32
HIF3A-211ENST00000528563 IL6RP08887 468 aaPredicted RBP13.04□□□□□ -0.32
HIF3A-211ENST00000528563 TBPP20226 339 aa13.04□□□□□ -0.32
HIF3A-211ENST00000528563 MRPS10P82664 201 aaKnown RBP13.04□□□□□ -0.32
HIF3A-211ENST00000528563 DGCR2P98153 550 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms