RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 A0A1B0GW64 132 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 CLPSL1A2RUU4 121 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 CRYM-AS1A6NIL9 109 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 E7EUB6 86 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 M0QZK8 103 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 SLC25A17O43808 307 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 S1PR2O95136 353 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 HPRT1P00492 218 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 HLA-DRB1P01911 266 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 P0C879 139 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 PGAM2P15259 253 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 UBE2KP61086 200 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 CX3CL1P78423 397 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 SRSF4Q08170 494 aaKnown RBP8.49□□□□□ -1.05
NEDD8-205ENST00000527046 ASAH1Q13510 395 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 RTL8BQ17RB0 113 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 SP6Q3SY56 376 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 AWAT1Q58HT5 328 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 C19orf54Q5BKX5 351 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 LIN54Q6MZP7 749 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 C10orf99Q6UWK7 81 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 CMTM1Q8IZ96 169 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 TEX45Q8NA69 505 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 TMEM158Q8WZ71 300 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 BORCS5Q969J3 196 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 SEC22AQ96IW7 307 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 HARBI1Q96MB7 349 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 SLC25A21Q9BQT8 299 aaPredicted RBP8.49□□□□□ -1.05
NEDD8-205ENST00000527046 PRSS22Q9GZN4 317 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 PLEKHA2Q9HB19 425 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 FAM212BQ9NTI7 297 aaPredicted RBP8.49□□□□□ -1.05
NEDD8-205ENST00000527046 PRR13Q9NZ81 148 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 METTL1Q9UBP6 276 aaKnown RBP8.49□□□□□ -1.05
NEDD8-205ENST00000527046 PRELID3BQ9Y3B1 194 aa8.49□□□□□ -1.05
NEDD8-205ENST00000527046 TET2Q6N021 2002 aaPredicted RBP8.48□□□□□ -1.05
NEDD8-205ENST00000527046 CGB1A6NKQ9 187 aa8.48□□□□□ -1.05
NEDD8-205ENST00000527046 RNF212BA8MTL3 300 aa8.48□□□□□ -1.05
NEDD8-205ENST00000527046 H0Y980 276 aa8.48□□□□□ -1.05
NEDD8-205ENST00000527046 SHOXO15266 292 aa8.48□□□□□ -1.05
NEDD8-205ENST00000527046 SPDEFO95238 335 aa8.48□□□□□ -1.05
NEDD8-205ENST00000527046 CDS2O95674 445 aa8.48□□□□□ -1.05
NEDD8-205ENST00000527046 IGKV1-5P01602 117 aa8.48□□□□□ -1.05
NEDD8-205ENST00000527046 CRYBA1P05813 215 aa8.48□□□□□ -1.05
NEDD8-205ENST00000527046 OR5AC1P0C628 307 aa8.48□□□□□ -1.05
NEDD8-205ENST00000527046 SAA1P0DJI8 122 aaPredicted RBP8.48□□□□□ -1.05
NEDD8-205ENST00000527046 MYOD1P15172 320 aa8.48□□□□□ -1.05
NEDD8-205ENST00000527046 UCP1P25874 307 aa8.48□□□□□ -1.05
NEDD8-205ENST00000527046 FAUP35544 74 aaKnown RBP8.48□□□□□ -1.05
NEDD8-205ENST00000527046 ECI1P42126 302 aa8.48□□□□□ -1.05
NEDD8-205ENST00000527046 KIR2DS2P43631 304 aa8.48□□□□□ -1.05
NEDD8-205ENST00000527046 CATR1Q13166 79 aa8.48□□□□□ -1.05
NEDD8-205ENST00000527046 TMEM187Q14656 261 aa8.48□□□□□ -1.05
NEDD8-205ENST00000527046 PRSS8Q16651 343 aa8.48□□□□□ -1.05
NEDD8-205ENST00000527046 TCTEX1D4Q5JR98 221 aa8.48□□□□□ -1.05
NEDD8-205ENST00000527046 HIST2H2BDQ6DRA6 164 aa8.48□□□□□ -1.05
NEDD8-205ENST00000527046 CADM3Q8N126 398 aa8.48□□□□□ -1.05
NEDD8-205ENST00000527046 TCTEX1D1Q8N7M0 179 aa8.48□□□□□ -1.05
NEDD8-205ENST00000527046 OR4S2Q8NH73 311 aa8.48□□□□□ -1.05
NEDD8-205ENST00000527046 TMEM167AQ8TBQ9 72 aa8.48□□□□□ -1.05
NEDD8-205ENST00000527046 GALNT14Q96FL9 552 aa8.48□□□□□ -1.05
NEDD8-205ENST00000527046 RHOVQ96L33 236 aa8.48□□□□□ -1.05
NEDD8-205ENST00000527046 NOL4LQ96MY1 436 aaPredicted RBP8.48□□□□□ -1.05
NEDD8-205ENST00000527046 TSNAXQ99598 290 aaKnown RBP8.48□□□□□ -1.05
NEDD8-205ENST00000527046 NAA60Q9H7X0 242 aa8.48□□□□□ -1.05
NEDD8-205ENST00000527046 NUBP2Q9Y5Y2 271 aa8.48□□□□□ -1.05
NEDD8-205ENST00000527046 A0A0G2JRQ6 117 aa8.47□□□□□ -1.05
NEDD8-205ENST00000527046 TEX13DA0A0J9YY54 714 aaPredicted RBP8.47□□□□□ -1.05
NEDD8-205ENST00000527046 DBX1A6NMT0 343 aa8.47□□□□□ -1.05
NEDD8-205ENST00000527046 TCRBP04435 133 aa8.47□□□□□ -1.05
NEDD8-205ENST00000527046 IGF1P05019 195 aa8.47□□□□□ -1.05
NEDD8-205ENST00000527046 RPA2P15927 270 aa8.47□□□□□ -1.05
NEDD8-205ENST00000527046 MECP2P51608 486 aaKnown RBP8.47□□□□□ -1.05
NEDD8-205ENST00000527046 CRIP2P52943 208 aaPredicted RBP8.47□□□□□ -1.05
NEDD8-205ENST00000527046 TAS2R31P59538 309 aa8.47□□□□□ -1.05
NEDD8-205ENST00000527046 CFHR3Q02985 330 aa8.47□□□□□ -1.05
NEDD8-205ENST00000527046 FOXL1Q12952 345 aa8.47□□□□□ -1.05
NEDD8-205ENST00000527046 RBMS2Q15434 407 aaKnown RBP8.47□□□□□ -1.05
NEDD8-205ENST00000527046 ASPHD1Q5U4P2 390 aa8.47□□□□□ -1.05
NEDD8-205ENST00000527046 OR4A47Q6IF82 309 aa8.47□□□□□ -1.05
NEDD8-205ENST00000527046 ZNF562Q6V9R5 426 aa8.47□□□□□ -1.05
NEDD8-205ENST00000527046 Q6ZRM9 215 aa8.47□□□□□ -1.05
NEDD8-205ENST00000527046 SLC25A42Q86VD7 318 aa8.47□□□□□ -1.05
NEDD8-205ENST00000527046 PPP1R27Q86WC6 154 aa8.47□□□□□ -1.05
NEDD8-205ENST00000527046 SELENOHQ8IZQ5 122 aaKnown RBP8.47□□□□□ -1.05
NEDD8-205ENST00000527046 DUSP18Q8NEJ0 188 aa8.47□□□□□ -1.05
NEDD8-205ENST00000527046 OR4F5Q8NH21 305 aa8.47□□□□□ -1.05
NEDD8-205ENST00000527046 CLCC1Q96S66 551 aa8.47□□□□□ -1.05
NEDD8-205ENST00000527046 RASL11BQ9BPW5 248 aa8.47□□□□□ -1.05
NEDD8-205ENST00000527046 TMEM222Q9H0R3 208 aa8.47□□□□□ -1.05
NEDD8-205ENST00000527046 OR51J1Q9H342 316 aa8.47□□□□□ -1.05
NEDD8-205ENST00000527046 ZNF430Q9H8G1 570 aaPredicted RBP8.47□□□□□ -1.05
NEDD8-205ENST00000527046 COPZ2Q9P299 210 aa8.47□□□□□ -1.05
NEDD8-205ENST00000527046 LINC00527Q9UJ94 153 aa8.47□□□□□ -1.05
NEDD8-205ENST00000527046 RNF114Q9Y508 228 aa8.47□□□□□ -1.05
NEDD8-205ENST00000527046 UPK2O00526 184 aa8.46□□□□□ -1.06
NEDD8-205ENST00000527046 CA2P00918 260 aa8.46□□□□□ -1.06
NEDD8-205ENST00000527046 OR9G9P0C7N8 305 aa8.46□□□□□ -1.06
NEDD8-205ENST00000527046 SPNP16150 400 aa8.46□□□□□ -1.06
NEDD8-205ENST00000527046 AKR1C4P17516 323 aa8.46□□□□□ -1.06
NEDD8-205ENST00000527046 PPIFP30405 207 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms