RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 VENTXO95231 258 aa9.69□□□□□ -0.86
LINC01001-201ENST00000526704 AMBPP02760 352 aa9.69□□□□□ -0.86
LINC01001-201ENST00000526704 DUTP33316 252 aaKnown RBP9.69□□□□□ -0.86
LINC01001-201ENST00000526704 LTC4SQ16873 150 aa9.69□□□□□ -0.86
LINC01001-201ENST00000526704 CLEC12BQ2HXU8 276 aa9.69□□□□□ -0.86
LINC01001-201ENST00000526704 ACOT6Q3I5F7 207 aaPredicted RBP9.69□□□□□ -0.86
LINC01001-201ENST00000526704 AARDQ4LEZ3 155 aa9.69□□□□□ -0.86
LINC01001-201ENST00000526704 COA6Q5JTJ3 125 aaKnown RBP9.69□□□□□ -0.86
LINC01001-201ENST00000526704 PRO1933Q9H354 126 aa9.69□□□□□ -0.86
LINC01001-201ENST00000526704 NBEAQ8NFP9 2946 aa9.69□□□□□ -0.86
LINC01001-201ENST00000526704 TRAV38-1A0A0B4J264 116 aa9.69□□□□□ -0.86
LINC01001-201ENST00000526704 GGCTO75223 188 aaKnown RBP9.69□□□□□ -0.86
LINC01001-201ENST00000526704 BMP5P22003 454 aa9.69□□□□□ -0.86
LINC01001-201ENST00000526704 HOXC12P31275 282 aa9.69□□□□□ -0.86
LINC01001-201ENST00000526704 KIR2DL2P43627 348 aaPredicted RBP9.69□□□□□ -0.86
LINC01001-201ENST00000526704 FAM3BP58499 235 aaPredicted RBP9.69□□□□□ -0.86
LINC01001-201ENST00000526704 HTD2P86397 168 aa9.69□□□□□ -0.86
LINC01001-201ENST00000526704 PAX5Q02548 391 aa9.69□□□□□ -0.86
LINC01001-201ENST00000526704 EDDM3AQ14507 147 aa9.69□□□□□ -0.86
LINC01001-201ENST00000526704 ACTL10Q5JWF8 245 aa9.69□□□□□ -0.86
LINC01001-201ENST00000526704 C9orf106Q8NAJ2 232 aa9.69□□□□□ -0.86
LINC01001-201ENST00000526704 OR5R1Q8NH85 324 aa9.69□□□□□ -0.86
LINC01001-201ENST00000526704 TMEM170AQ8WVE7 144 aa9.69□□□□□ -0.86
LINC01001-201ENST00000526704 XKRY2A2RUG3 117 aa9.68□□□□□ -0.86
LINC01001-201ENST00000526704 SPINT2O43291 252 aa9.68□□□□□ -0.86
LINC01001-201ENST00000526704 CRYAAP02489 173 aa9.68□□□□□ -0.86
LINC01001-201ENST00000526704 ADH4P08319 380 aa9.68□□□□□ -0.86
LINC01001-201ENST00000526704 EGR1P18146 543 aa9.68□□□□□ -0.86
LINC01001-201ENST00000526704 CD1BP29016 333 aa9.68□□□□□ -0.86
LINC01001-201ENST00000526704 GPR12P47775 334 aa9.68□□□□□ -0.86
LINC01001-201ENST00000526704 ATP5G3P48201 142 aa9.68□□□□□ -0.86
LINC01001-201ENST00000526704 FABP6P51161 128 aa9.68□□□□□ -0.86
LINC01001-201ENST00000526704 GNB1P62873 340 aa9.68□□□□□ -0.86
LINC01001-201ENST00000526704 TRAT1Q6PIZ9 186 aa9.68□□□□□ -0.86
LINC01001-201ENST00000526704 RNASEH2CQ8TDP1 164 aaKnown RBP9.68□□□□□ -0.86
LINC01001-201ENST00000526704 LRRC29Q8WV35 223 aa9.68□□□□□ -0.86
LINC01001-201ENST00000526704 WASF3Q9UPY6 502 aa9.68□□□□□ -0.86
LINC01001-201ENST00000526704 GALR2O43603 387 aaPredicted RBP9.68□□□□□ -0.86
LINC01001-201ENST00000526704 FCGR3BO75015 233 aa9.68□□□□□ -0.86
LINC01001-201ENST00000526704 CD82P27701 267 aa9.68□□□□□ -0.86
LINC01001-201ENST00000526704 SRP14P37108 136 aaKnown RBP9.68□□□□□ -0.86
LINC01001-201ENST00000526704 TGIF2LXQ8IUE1 241 aa9.68□□□□□ -0.86
LINC01001-201ENST00000526704 C1orf162Q8NEQ5 155 aaPredicted RBP9.68□□□□□ -0.86
LINC01001-201ENST00000526704 PLPPR2Q96GM1 343 aa9.68□□□□□ -0.86
LINC01001-201ENST00000526704 RAI1Q7Z5J4 1906 aaPredicted RBP9.67□□□□□ -0.86
LINC01001-201ENST00000526704 DSCAMO60469 2012 aa9.67□□□□□ -0.86
LINC01001-201ENST00000526704 ZFHX4Q86UP3 3567 aa9.67□□□□□ -0.86
LINC01001-201ENST00000526704 DVL1O14640 695 aa9.67□□□□□ -0.86
LINC01001-201ENST00000526704 TYMSP04818 313 aa9.67□□□□□ -0.86
LINC01001-201ENST00000526704 PDLIM4P50479 330 aa9.67□□□□□ -0.86
LINC01001-201ENST00000526704 EDDM3BP56851 147 aa9.67□□□□□ -0.86
LINC01001-201ENST00000526704 UBE2G2P60604 165 aa9.67□□□□□ -0.86
LINC01001-201ENST00000526704 OR2T10Q8NGZ9 312 aa9.67□□□□□ -0.86
LINC01001-201ENST00000526704 RAB1CQ92928 201 aa9.67□□□□□ -0.86
LINC01001-201ENST00000526704 IGHV2OR16-5A0A0B4J2B6 119 aa9.67□□□□□ -0.86
LINC01001-201ENST00000526704 FAM90A9PA6NNJ1 464 aa9.67□□□□□ -0.86
LINC01001-201ENST00000526704 PRSS46E5RG02 174 aa9.67□□□□□ -0.86
LINC01001-201ENST00000526704 IGLV1-44P01699 117 aa9.67□□□□□ -0.86
LINC01001-201ENST00000526704 PRDX2P32119 198 aa9.67□□□□□ -0.86
LINC01001-201ENST00000526704 CHRNA7P36544 502 aa9.67□□□□□ -0.86
LINC01001-201ENST00000526704 NUBP1P53384 320 aa9.67□□□□□ -0.86
LINC01001-201ENST00000526704 JOSD1Q15040 202 aaPredicted RBP9.67□□□□□ -0.86
LINC01001-201ENST00000526704 PRSS8Q16651 343 aa9.67□□□□□ -0.86
LINC01001-201ENST00000526704 TMEM249Q2WGJ8 235 aa9.67□□□□□ -0.86
LINC01001-201ENST00000526704 ZNF718Q3SXZ3 478 aa9.67□□□□□ -0.86
LINC01001-201ENST00000526704 PRAMEF5Q5TYX0 476 aa9.67□□□□□ -0.86
LINC01001-201ENST00000526704 MBNL2Q5VZF2 373 aaKnown RBP9.67□□□□□ -0.86
LINC01001-201ENST00000526704 LINC01551Q86U37 167 aa9.67□□□□□ -0.86
LINC01001-201ENST00000526704 FAM90A1Q86YD7 464 aa9.67□□□□□ -0.86
LINC01001-201ENST00000526704 OR5T1Q8NG75 326 aa9.67□□□□□ -0.86
LINC01001-201ENST00000526704 DERL1Q9BUN8 251 aa9.67□□□□□ -0.86
LINC01001-201ENST00000526704 FUT9Q9Y231 359 aa9.67□□□□□ -0.86
LINC01001-201ENST00000526704 IGKV1D-17A0A075B6S4 117 aa9.66□□□□□ -0.86
LINC01001-201ENST00000526704 IGHV1-18A0A0C4DH31 117 aa9.66□□□□□ -0.86
LINC01001-201ENST00000526704 TMPRSS2O15393 492 aa9.66□□□□□ -0.86
LINC01001-201ENST00000526704 PDE6DO43924 150 aa9.66□□□□□ -0.86
LINC01001-201ENST00000526704 HPRT1P00492 218 aa9.66□□□□□ -0.86
LINC01001-201ENST00000526704 GZMBP10144 247 aa9.66□□□□□ -0.86
LINC01001-201ENST00000526704 GCH1P30793 250 aa9.66□□□□□ -0.86
LINC01001-201ENST00000526704 NUTF2P61970 127 aaKnown RBP9.66□□□□□ -0.86
LINC01001-201ENST00000526704 MORN2Q502X0 79 aa9.66□□□□□ -0.86
LINC01001-201ENST00000526704 TREML4Q6UXN2 200 aa9.66□□□□□ -0.86
LINC01001-201ENST00000526704 VKORC1L1Q8N0U8 176 aa9.66□□□□□ -0.86
LINC01001-201ENST00000526704 ACY3Q96HD9 319 aa9.66□□□□□ -0.86
LINC01001-201ENST00000526704 FAM234AQ9H0X4 552 aa9.66□□□□□ -0.86
LINC01001-201ENST00000526704 KCNIP2Q9NS61 270 aa9.66□□□□□ -0.86
LINC01001-201ENST00000526704 BDP1A6H8Y1 2624 aa9.66□□□□□ -0.86
LINC01001-201ENST00000526704 RRHO14718 337 aa9.66□□□□□ -0.86
LINC01001-201ENST00000526704 VDAC2P45880 294 aaPredicted RBP9.66□□□□□ -0.86
LINC01001-201ENST00000526704 CASP6P55212 293 aa9.66□□□□□ -0.86
LINC01001-201ENST00000526704 USF2Q15853 346 aaPredicted RBP9.66□□□□□ -0.86
LINC01001-201ENST00000526704 RPL39P5Q59GN2 51 aa9.66□□□□□ -0.86
LINC01001-201ENST00000526704 LOXL4Q96JB6 756 aa9.66□□□□□ -0.86
LINC01001-201ENST00000526704 NOL4LQ96MY1 436 aaPredicted RBP9.66□□□□□ -0.86
LINC01001-201ENST00000526704 MGST2Q99735 147 aa9.66□□□□□ -0.86
LINC01001-201ENST00000526704 PATZ1Q9HBE1 687 aaKnown RBP9.66□□□□□ -0.86
LINC01001-201ENST00000526704 TUBG2Q9NRH3 451 aa9.66□□□□□ -0.86
LINC01001-201ENST00000526704 AURKAIP1Q9NWT8 199 aaPredicted RBP9.66□□□□□ -0.86
LINC01001-201ENST00000526704 GNG12Q9UBI6 72 aa9.66□□□□□ -0.86
LINC01001-201ENST00000526704 JPT1Q9UK76 154 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms