RNA–Protein interactions for RNA: ENST00000525293.5

CD44-216, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-216ENST00000525293 C9orf66Q5T8R8 295 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 TMEM244Q5VVB8 128 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 PLPP4Q5VZY2 271 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 AMMECR1LQ6DCA0 310 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 UFSP1Q6NVU6 142 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 DNAJC24Q6P3W2 148 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 APOOLQ6UXV4 268 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 ZNF730Q6ZMV8 503 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 FOXI2Q6ZQN5 318 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 MOB1BQ7L9L4 216 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 ZNF550Q7Z398 422 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 DAZ4Q86SG3 579 aaKnown RBP1.76□□□□□ -2.13
CD44-216ENST00000525293 CD177Q8N6Q3 437 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 NPWQ8N729 165 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 Q8N7P7 452 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 SLC35G3Q8N808 338 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 OR8B12Q8NGG6 310 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 OR5A1Q8NGJ0 315 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 OR1L1Q8NH94 360 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 OR51E1Q8TCB6 317 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 TSLPQ969D9 159 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 PLEKHB2Q96CS7 222 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 SLAMF6Q96DU3 332 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 DNAJA3Q96EY1 480 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 PHYHIPLQ96FC7 376 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 FMC1Q96HJ9 113 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 C9orf85Q96MD7 179 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 TSPAN32Q96QS1 320 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 OR4C12Q96R67 309 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 SDF2Q99470 211 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 HIST1H2BLQ99880 126 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 RARRES2Q99969 163 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 MRPL45Q9BRJ2 306 aaKnown RBP1.76□□□□□ -2.13
CD44-216ENST00000525293 POLR2J3Q9H1A7 115 aaKnown RBP1.76□□□□□ -2.13
CD44-216ENST00000525293 ATG5Q9H1Y0 275 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 MOB1AQ9H8S9 216 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 NPVFQ9HCQ7 196 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 DAZ1Q9NQZ3 744 aaKnown RBP1.76□□□□□ -2.13
CD44-216ENST00000525293 PARP11Q9NR21 331 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 DAZ3Q9NR90 486 aaKnown RBP1.76□□□□□ -2.13
CD44-216ENST00000525293 MMP26Q9NRE1 261 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 TNFRSF19Q9NS68 423 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 RBM22Q9NW64 420 aaKnown RBP eCLIP1.76□□□□□ -2.13
CD44-216ENST00000525293 ZNF581Q9P0T4 197 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 RBM12B-AS1Q9P1G2 102 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 VAX2Q9UIW0 290 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 CYSLTR1Q9Y271 337 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 MED31Q9Y3C7 131 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 YTHDF2Q9Y5A9 579 aaKnown RBP1.76□□□□□ -2.13
CD44-216ENST00000525293 PHLPP1O60346 1717 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 TMEM131LA2VDJ0 1609 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 SYNJ1O43426 1573 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 WDR62O43379 1518 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 ZFYVE16Q7Z3T8 1539 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 TOPBP1Q92547 1522 aa1.76□□□□□ -2.13
CD44-216ENST00000525293 GON4LQ3T8J9 2241 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 ROBO3Q96MS0 1386 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 CEP350Q5VT06 3117 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 A0A0B4J2A0 478 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 TRGV8A0A0C4DH27 118 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 B4DEV8 164 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 ZNF670-ZNF695F2Z2N8 137 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 FNDC10F2Z333 226 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 LY6LH3BQJ8 138 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 J3QQQ9 107 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 SLC17A2O00624 439 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 OVOL1O14753 267 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 TAX1BP3O14907 124 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 MYL12BO14950 172 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 TNFSF12O43508 249 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 ARL6IP5O75915 188 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 SIX6O95475 246 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 IGHMP01871 453 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 MT-ATP8P03928 68 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 MMP7P09237 267 aaPredicted RBP1.75□□□□□ -2.13
CD44-216ENST00000525293 OR9G9P0C7N8 305 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 RBMY1CP0DJD4 496 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 CTLA4P16410 223 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 FKBP2P26885 142 aaKnown RBP1.75□□□□□ -2.13
CD44-216ENST00000525293 PRSS3P35030 304 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 BTCP35070 178 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 PTGDSP41222 190 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 DIO3P55073 304 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 CTBP2P56545 445 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 KRTAP10-8P60410 259 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 CACNG7P62955 275 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 NDPQ00604 133 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 PSG9Q00887 426 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 FABP5Q01469 135 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 ZNF85Q03923 595 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 AKR1C1Q04828 323 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 IL15RAQ13261 267 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 ENDOGQ14249 297 aaKnown RBP1.75□□□□□ -2.13
CD44-216ENST00000525293 MS4A13Q5J8X5 152 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 ZNF506Q5JVG8 444 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 CGB2Q6NT52 195 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 CNIH2Q6PI25 160 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 STAC2Q6ZMT1 411 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 TMUB2Q71RG4 321 aa1.75□□□□□ -2.13
CD44-216ENST00000525293 C17orf64Q86WR6 236 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms