RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 OGFRL1Q5TC84 451 aaPredicted RBP18.03■□□□□ 0.48
USP47-205ENST00000525257 NECAP1Q8NC96 275 aa18.03■□□□□ 0.48
USP47-205ENST00000525257 OSR1Q8TAX0 266 aaPredicted RBP18.03■□□□□ 0.48
USP47-205ENST00000525257 KCTD12Q96CX2 325 aaKnown RBP18.03■□□□□ 0.48
USP47-205ENST00000525257 SPIN2AQ99865 258 aa18.03■□□□□ 0.48
USP47-205ENST00000525257 SPIN2BQ9BPZ2 258 aa18.03■□□□□ 0.48
USP47-205ENST00000525257 RAB22AQ9UL26 194 aa18.03■□□□□ 0.48
USP47-205ENST00000525257 EBAG9O00559 213 aa18.02■□□□□ 0.48
USP47-205ENST00000525257 DIRAS3O95661 229 aa18.02■□□□□ 0.48
USP47-205ENST00000525257 GNB3P16520 340 aa18.02■□□□□ 0.48
USP47-205ENST00000525257 KIR2DS2P43631 304 aa18.02■□□□□ 0.48
USP47-205ENST00000525257 IRF3Q14653 427 aa18.02■□□□□ 0.48
USP47-205ENST00000525257 C15orf32Q32M92 178 aa18.02■□□□□ 0.48
USP47-205ENST00000525257 TTC9CQ8N5M4 171 aa18.02■□□□□ 0.48
USP47-205ENST00000525257 ZC4H2Q9NQZ6 224 aa18.02■□□□□ 0.48
USP47-205ENST00000525257 SCN3BQ9NY72 215 aa18.02■□□□□ 0.48
USP47-205ENST00000525257 V9GY05 133 aa18.02■□□□□ 0.48
USP47-205ENST00000525257 CREBL2O60519 120 aaPredicted RBP18.01■□□□□ 0.47
USP47-205ENST00000525257 CDK10Q15131 360 aa18.01■□□□□ 0.47
USP47-205ENST00000525257 TRAM1Q15629 374 aa18.01■□□□□ 0.47
USP47-205ENST00000525257 C19orf35Q6ZS72 473 aa18.01■□□□□ 0.47
USP47-205ENST00000525257 DCUN1D5Q9BTE7 237 aa18.01■□□□□ 0.47
USP47-205ENST00000525257 DMRT1Q9Y5R6 373 aa18.01■□□□□ 0.47
USP47-205ENST00000525257 J3QRK9 145 aa18■□□□□ 0.47
USP47-205ENST00000525257 OR2C1O95371 312 aa18■□□□□ 0.47
USP47-205ENST00000525257 MMD2Q8IY49 270 aa18■□□□□ 0.47
USP47-205ENST00000525257 H1FOOQ8IZA3 346 aaPredicted RBP18■□□□□ 0.47
USP47-205ENST00000525257 OR10R2Q8NGX6 335 aa18■□□□□ 0.47
USP47-205ENST00000525257 CACNG8Q8WXS5 425 aa18■□□□□ 0.47
USP47-205ENST00000525257 TECRQ9NZ01 308 aaKnown RBP18■□□□□ 0.47
USP47-205ENST00000525257 HMX3A6NHT5 357 aa17.99■□□□□ 0.47
USP47-205ENST00000525257 MFNGO00587 321 aa17.99■□□□□ 0.47
USP47-205ENST00000525257 FCGR3BO75015 233 aa17.99■□□□□ 0.47
USP47-205ENST00000525257 GGCTO75223 188 aaKnown RBP17.99■□□□□ 0.47
USP47-205ENST00000525257 GADD45AP24522 165 aa17.99■□□□□ 0.47
USP47-205ENST00000525257 PSMA1P25786 263 aaKnown RBP17.99■□□□□ 0.47
USP47-205ENST00000525257 FABP5Q01469 135 aa17.99■□□□□ 0.47
USP47-205ENST00000525257 FRAS1Q86XX4 4008 aa17.98■□□□□ 0.47
USP47-205ENST00000525257 IGKV1D-8A0A087WSZ0 117 aa17.98■□□□□ 0.47
USP47-205ENST00000525257 IGHV3-23P01764 117 aa17.98■□□□□ 0.47
USP47-205ENST00000525257 HIST1H1DP16402 221 aaKnown RBP17.98■□□□□ 0.47
USP47-205ENST00000525257 RANBP1P43487 201 aa17.98■□□□□ 0.47
USP47-205ENST00000525257 OR2B11Q5JQS5 317 aa17.98■□□□□ 0.47
USP47-205ENST00000525257 SLC16A13Q7RTY0 426 aa17.98■□□□□ 0.47
USP47-205ENST00000525257 SLC25A42Q86VD7 318 aa17.98■□□□□ 0.47
USP47-205ENST00000525257 LINC00476Q8WZB0 136 aa17.98■□□□□ 0.47
USP47-205ENST00000525257 FBXL7Q9UJT9 491 aa17.98■□□□□ 0.47
USP47-205ENST00000525257 ZNF257Q9Y2Q1 563 aa17.98■□□□□ 0.47
USP47-205ENST00000525257 LGALS9O00182 355 aa17.97■□□□□ 0.47
USP47-205ENST00000525257 CASQ2O14958 399 aaPredicted RBP17.97■□□□□ 0.47
USP47-205ENST00000525257 TALDO1P37837 337 aa17.97■□□□□ 0.47
USP47-205ENST00000525257 ARFRP1Q13795 201 aa17.97■□□□□ 0.47
USP47-205ENST00000525257 FAM209BQ5JX69 171 aa17.97■□□□□ 0.47
USP47-205ENST00000525257 KCTD9Q7L273 389 aa17.97■□□□□ 0.47
USP47-205ENST00000525257 VKORC1L1Q8N0U8 176 aa17.97■□□□□ 0.47
USP47-205ENST00000525257 S4R3C0 116 aa17.97■□□□□ 0.47
USP47-205ENST00000525257 TEX22C9J3V5 150 aa17.96■□□□□ 0.47
USP47-205ENST00000525257 RAB27BO00194 218 aa17.96■□□□□ 0.47
USP47-205ENST00000525257 CBLN1P23435 193 aa17.96■□□□□ 0.47
USP47-205ENST00000525257 PSMD7P51665 324 aa17.96■□□□□ 0.47
USP47-205ENST00000525257 MLLT11Q13015 90 aaPredicted RBP17.96■□□□□ 0.47
USP47-205ENST00000525257 TMEM61Q8N0U2 210 aa17.96■□□□□ 0.47
USP47-205ENST00000525257 ZNF645Q8N7E2 425 aa17.96■□□□□ 0.47
USP47-205ENST00000525257 VCXQ9H320 206 aa17.96■□□□□ 0.47
USP47-205ENST00000525257 DPPA5A6NC42 116 aa17.95■□□□□ 0.46
USP47-205ENST00000525257 ARL3P36405 182 aa17.95■□□□□ 0.46
USP47-205ENST00000525257 OR10A3P58181 314 aa17.95■□□□□ 0.46
USP47-205ENST00000525257 RPL30P62888 115 aaKnown RBP17.95■□□□□ 0.46
USP47-205ENST00000525257 ZNF57Q68EA5 555 aaPredicted RBP17.95■□□□□ 0.46
USP47-205ENST00000525257 CLEC19AQ6UXS0 136 aa17.95■□□□□ 0.46
USP47-205ENST00000525257 OR52B4Q8NGK2 314 aa17.95■□□□□ 0.46
USP47-205ENST00000525257 CCDC140Q96MF4 163 aa17.95■□□□□ 0.46
USP47-205ENST00000525257 FYTTD1Q96QD9 318 aaKnown RBP17.95■□□□□ 0.46
USP47-205ENST00000525257 OVOL2Q9BRP0 275 aa17.95■□□□□ 0.46
USP47-205ENST00000525257 GGTLC1Q9BX51 225 aa17.95■□□□□ 0.46
USP47-205ENST00000525257 ELF5Q9UKW6 265 aaPredicted RBP17.95■□□□□ 0.46
USP47-205ENST00000525257 MRPS7Q9Y2R9 242 aaKnown RBP17.95■□□□□ 0.46
USP47-205ENST00000525257 PRELID3BQ9Y3B1 194 aa17.95■□□□□ 0.46
USP47-205ENST00000525257 TMEM213A2RRL7 107 aa17.94■□□□□ 0.46
USP47-205ENST00000525257 NDUFB8O95169 186 aa17.94■□□□□ 0.46
USP47-205ENST00000525257 LY6G6CO95867 125 aa17.94■□□□□ 0.46
USP47-205ENST00000525257 PMS2P11Q13670 270 aa17.94■□□□□ 0.46
USP47-205ENST00000525257 Q6ZS49 121 aa17.94■□□□□ 0.46
USP47-205ENST00000525257 GPHB5Q86YW7 130 aa17.94■□□□□ 0.46
USP47-205ENST00000525257 OR51E2Q9H255 320 aa17.94■□□□□ 0.46
USP47-205ENST00000525257 MLXQ9UH92 298 aa17.94■□□□□ 0.46
USP47-205ENST00000525257 TPRKBQ9Y3C4 175 aa17.94■□□□□ 0.46
USP47-205ENST00000525257 ZNF320A2RRD8 509 aa17.93■□□□□ 0.46
USP47-205ENST00000525257 NPIPB5A8MRT5 1133 aa17.93■□□□□ 0.46
USP47-205ENST00000525257 E7EUB6 86 aa17.93■□□□□ 0.46
USP47-205ENST00000525257 RGS10O43665 173 aa17.93■□□□□ 0.46
USP47-205ENST00000525257 SCAF4O95104 1147 aaKnown RBP17.93■□□□□ 0.46
USP47-205ENST00000525257 IL6RP08887 468 aaPredicted RBP17.93■□□□□ 0.46
USP47-205ENST00000525257 RPL27AP46776 148 aaKnown RBP17.93■□□□□ 0.46
USP47-205ENST00000525257 MGLLQ99685 303 aa17.93■□□□□ 0.46
USP47-205ENST00000525257 CENPOQ9BU64 300 aa17.93■□□□□ 0.46
USP47-205ENST00000525257 CCDC90BQ9GZT6 254 aa17.93■□□□□ 0.46
USP47-205ENST00000525257 ACOT13Q9NPJ3 140 aa17.93■□□□□ 0.46
USP47-205ENST00000525257 RBMX2Q9Y388 322 aaKnown RBP17.93■□□□□ 0.46
USP47-205ENST00000525257 CXorf65A6NEN9 183 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms