RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 CST11Q9H112 138 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 ATG5Q9H1Y0 275 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 ZNF286AQ9HBT8 521 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 Q9N2K0 584 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.32□□□□□ -2.04
CSDE1-208ENST00000524652 PLEKHJ1Q9NW61 149 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 ABRACLQ9P1F3 81 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 ZNF230Q9UIE0 474 aaPredicted RBP2.32□□□□□ -2.04
CSDE1-208ENST00000524652 RAB22AQ9UL26 194 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 ANAPC10Q9UM13 185 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 MOB4Q9Y3A3 225 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 ETV7Q9Y603 341 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 V9GYH0 126 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 DNAH9Q9NYC9 4486 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 TRAV18A0A075B6X5 111 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 MEIKINA0A087WXM9 373 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 A0A087X0M5 115 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 TRBV6-6A0A0A6YYG2 114 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 IGHV2-26A0A0B4J1V2 119 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 KBTBD11-OT1A0A1B0GTJ5 212 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 A0A1B0GX30 115 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 A0A1W2PPE3 182 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 A0A1W2PQ09 198 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 A0A1W2PRD5 423 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 A0A1W2PRF3 423 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 A0A1W2PRM7 423 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 ZNF729A6NN14 1252 aaPredicted RBP2.31□□□□□ -2.04
CSDE1-208ENST00000524652 A8MU10 97 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 ODF3BA8MYP8 253 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 MCRIP1C9JLW8 97 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 XRCC3O43542 346 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 ENSAO43768 121 aaKnown RBP2.31□□□□□ -2.04
CSDE1-208ENST00000524652 FOXH1O75593 365 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 CLPXO76031 633 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 IGLV1-47P01700 117 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 APOA1P02647 267 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 CLEC3BP05452 202 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 GLAP06280 429 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 MELTFP08582 738 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 GSTT2P0CG29 244 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 GSTT2BP0CG30 244 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 DNAH10OSP0CZ25 163 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 ZNF728P0DKX0 622 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 IGHV1-8P0DP01 117 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 TMEM11P17152 192 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 MNDAP41218 407 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 GLP1RP43220 463 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 KCNJ3P48549 501 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 HLA-DRB3P79483 266 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 MEF2CQ06413 473 aaPredicted RBP2.31□□□□□ -2.04
CSDE1-208ENST00000524652 DYNC1I2Q13409 638 aaKnown RBP2.31□□□□□ -2.04
CSDE1-208ENST00000524652 KCNJ8Q15842 424 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 LTC4SQ16873 150 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 IGSF11Q5DX21 431 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 TMEM69Q5SWH9 247 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 FAM120AOSQ5T036 256 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 HACD4Q5VWC8 232 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 OR52W1Q6IF63 320 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 FAHD2BQ6P2I3 314 aaPredicted RBP2.31□□□□□ -2.04
CSDE1-208ENST00000524652 CNIH2Q6PI25 160 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 FIP1L1Q6UN15 594 aaKnown RBP2.31□□□□□ -2.04
CSDE1-208ENST00000524652 HEPN1Q6WQI6 88 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 BRD3OSQ6XYD6 125 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 GDPD3Q7L5L3 318 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 SNX29P2Q8IUI4 249 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 KIR3DL3Q8N743 410 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 OR56B1Q8NGI3 324 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 OR4D10Q8NGI6 311 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 OR5D13Q8NGL4 314 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 OR4P4Q8NGL7 312 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 OR6Q1Q8NGQ2 317 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 MCFD2Q8NI22 146 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 NEK7Q8TDX7 302 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 GPX8Q8TED1 209 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 ACOT12Q8WYK0 555 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 C22orf15Q8WYQ4 148 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 LHX4Q969G2 390 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 ARL11Q969Q4 196 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 MRGPRFQ96AM1 343 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 CREB3L1Q96BA8 519 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 UPRTQ96BW1 309 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 RAB3CQ96E17 227 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 FAHD2AQ96GK7 314 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 CMTM3Q96MX0 182 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 ZNF714Q96N38 554 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 CMSS1Q9BQ75 279 aaKnown RBP2.31□□□□□ -2.04
CSDE1-208ENST00000524652 URM1Q9BTM9 101 aaKnown RBP2.31□□□□□ -2.04
CSDE1-208ENST00000524652 C6orf62Q9GZU0 229 aaPredicted RBP2.31□□□□□ -2.04
CSDE1-208ENST00000524652 NCOR1P1Q9H4R4 102 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 SLA2Q9H6Q3 261 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 LINC00574Q9H8X3 128 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 TAF9BQ9HBM6 251 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 YAE1D1Q9NRH1 226 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 CALYQ9NYX4 217 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 IDI2-AS1Q9NZ38 188 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 OR1A1Q9P1Q5 309 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 ONECUT1Q9UBC0 465 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 EXTL2Q9UBQ6 330 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 KLK11Q9UBX7 282 aa2.31□□□□□ -2.04
CSDE1-208ENST00000524652 ZNF69Q9UC07 566 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms