RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 SPCS3P61009 180 aa9.19□□□□□ -0.94
HDAC9-228ENST00000524023 GCSAMLQ5JQS6 135 aa9.19□□□□□ -0.94
HDAC9-228ENST00000524023 DNLZQ5SXM8 178 aa9.19□□□□□ -0.94
HDAC9-228ENST00000524023 SSX9Q7RTT3 188 aa9.19□□□□□ -0.94
HDAC9-228ENST00000524023 C1orf174Q8IYL3 243 aa9.19□□□□□ -0.94
HDAC9-228ENST00000524023 OR4A16Q8NH70 328 aa9.19□□□□□ -0.94
HDAC9-228ENST00000524023 Q8TCH9 128 aa9.19□□□□□ -0.94
HDAC9-228ENST00000524023 ANAPC16Q96DE5 110 aa9.19□□□□□ -0.94
HDAC9-228ENST00000524023 STARD4Q96DR4 205 aa9.19□□□□□ -0.94
HDAC9-228ENST00000524023 YPEL2Q96QA6 119 aa9.19□□□□□ -0.94
HDAC9-228ENST00000524023 PFDN5Q99471 154 aa9.19□□□□□ -0.94
HDAC9-228ENST00000524023 HIST1H2BLQ99880 126 aa9.19□□□□□ -0.94
HDAC9-228ENST00000524023 PRDM13Q9H4Q3 707 aa9.19□□□□□ -0.94
HDAC9-228ENST00000524023 TRAV38-1A0A0B4J264 116 aa9.18□□□□□ -0.94
HDAC9-228ENST00000524023 M0R1X1 148 aa9.18□□□□□ -0.94
HDAC9-228ENST00000524023 MGST3O14880 152 aa9.18□□□□□ -0.94
HDAC9-228ENST00000524023 CGAP01215 116 aa9.18□□□□□ -0.94
HDAC9-228ENST00000524023 IFNA10P01566 189 aa9.18□□□□□ -0.94
HDAC9-228ENST00000524023 MSMPQ1L6U9 139 aa9.18□□□□□ -0.94
HDAC9-228ENST00000524023 CR1LQ2VPA4 569 aa9.18□□□□□ -0.94
HDAC9-228ENST00000524023 TMEM249Q2WGJ8 235 aa9.18□□□□□ -0.94
HDAC9-228ENST00000524023 C9orf152Q5JTZ5 239 aa9.18□□□□□ -0.94
HDAC9-228ENST00000524023 BHLHA15Q7RTS1 189 aaPredicted RBP9.18□□□□□ -0.94
HDAC9-228ENST00000524023 LRP11Q86VZ4 500 aa9.18□□□□□ -0.94
HDAC9-228ENST00000524023 TMEM183AQ8IXX5 376 aa9.18□□□□□ -0.94
HDAC9-228ENST00000524023 FAM216AQ8WUB2 273 aa9.18□□□□□ -0.94
HDAC9-228ENST00000524023 RAB1CQ92928 201 aa9.18□□□□□ -0.94
HDAC9-228ENST00000524023 PACRGQ96M98 296 aaPredicted RBP9.18□□□□□ -0.94
HDAC9-228ENST00000524023 DKK4Q9UBT3 224 aa9.18□□□□□ -0.94
HDAC9-228ENST00000524023 DUSP13Q9UII6 198 aa9.18□□□□□ -0.94
HDAC9-228ENST00000524023 PROCRQ9UNN8 238 aa9.18□□□□□ -0.94
HDAC9-228ENST00000524023 PPP5D1E7EU14 171 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 RBFOX2O43251 390 aaKnown RBP eCLIP9.17□□□□□ -0.94
HDAC9-228ENST00000524023 WT1P19544 449 aaPredicted RBP9.17□□□□□ -0.94
HDAC9-228ENST00000524023 VDAC2P45880 294 aaPredicted RBP9.17□□□□□ -0.94
HDAC9-228ENST00000524023 ZNF134P52741 427 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 EDDM3BP56851 147 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 LOXL3P58215 753 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 RPP30P78346 268 aaKnown RBP9.17□□□□□ -0.94
HDAC9-228ENST00000524023 P2RY6Q15077 328 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 RPL39P5Q59GN2 51 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 GCSAMQ8N6F7 178 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 OR52E5Q8NH55 327 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 PPP1R35Q8TAP8 253 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 MEGF10Q96KG7 1140 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 PCGF1Q9BSM1 259 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 FAM234AQ9H0X4 552 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 HEYLQ9NQ87 328 aaPredicted RBP9.17□□□□□ -0.94
HDAC9-228ENST00000524023 SLC25A15Q9Y619 301 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 SVILO95425 2214 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 IGHV3OR15-7A0A075B7D8 119 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 A0A1W2PPQ1 181 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 AHRRA9YTQ3 701 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 F2RL2O00254 374 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 RRHO14718 337 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 PDE6DO43924 150 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 SOX15O60248 233 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 MPDU1O75352 247 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 CRYAAP02489 173 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 CFHR2P36980 270 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 RELBQ01201 579 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 CLEC12BQ2HXU8 276 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 PDLIM3Q53GG5 364 aaPredicted RBP9.17□□□□□ -0.94
HDAC9-228ENST00000524023 TREML4Q6UXN2 200 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 VKORC1L1Q8N0U8 176 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 FAM169BQ8N8A8 192 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 IFI27L2Q9H2X8 130 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 GFOD1Q9NXC2 390 aa9.17□□□□□ -0.94
HDAC9-228ENST00000524023 CADP27708 2225 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 TRAV3A0A0B4J244 114 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 A0A1W2PPV4 95 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 PRSS46E5RG02 174 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 GGCTO75223 188 aaKnown RBP9.16□□□□□ -0.94
HDAC9-228ENST00000524023 IGHV3-13P01766 116 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 IGHV3-7P01780 117 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 SRP14P37108 136 aaKnown RBP9.16□□□□□ -0.94
HDAC9-228ENST00000524023 OPRK1P41145 380 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 FAM3BP58499 235 aaPredicted RBP9.16□□□□□ -0.94
HDAC9-228ENST00000524023 UBE2G2P60604 165 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 ERVK-16P61578 105 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 GNB1P62873 340 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 ZNRF1Q8ND25 227 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 OR2T10Q8NGZ9 312 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 OR1P1Q8NH06 330 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 S1PR3Q99500 378 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 PATZ1Q9HBE1 687 aaKnown RBP9.16□□□□□ -0.94
HDAC9-228ENST00000524023 ZMAT5Q9UDW3 170 aaKnown RBP9.16□□□□□ -0.94
HDAC9-228ENST00000524023 GALR2O43603 387 aaPredicted RBP9.16□□□□□ -0.94
HDAC9-228ENST00000524023 GATCO43716 136 aaKnown RBP9.16□□□□□ -0.94
HDAC9-228ENST00000524023 GFRA3O60609 400 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 BMP5P22003 454 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 ATP5G3P48201 142 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 TMPRSS3P57727 454 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 GAMTQ14353 236 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 SPRNQ5BIV9 151 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 COA6Q5JTJ3 125 aaKnown RBP9.16□□□□□ -0.94
HDAC9-228ENST00000524023 CST9LP1Q5W188 147 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 C1orf229Q6ZS94 237 aaPredicted RBP9.16□□□□□ -0.94
HDAC9-228ENST00000524023 LINC01551Q86U37 167 aa9.16□□□□□ -0.94
HDAC9-228ENST00000524023 OR5T1Q8NG75 326 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms