RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 ARL16Q0P5N6 197 aa16.9■□□□□ 0.3
SQLE-206ENST00000523430 OR4A16Q8NH70 328 aa16.9■□□□□ 0.3
SQLE-206ENST00000523430 TMEM186Q96B77 213 aa16.9■□□□□ 0.3
SQLE-206ENST00000523430 OR4C12Q96R67 309 aa16.9■□□□□ 0.3
SQLE-206ENST00000523430 SPOCK3Q9BQ16 436 aa16.9■□□□□ 0.3
SQLE-206ENST00000523430 TAGLNQ01995 201 aaKnown RBP16.9■□□□□ 0.3
SQLE-206ENST00000523430 OR5AN1Q8NGI8 311 aa16.9■□□□□ 0.3
SQLE-206ENST00000523430 OR1S2Q8NGQ3 325 aa16.9■□□□□ 0.3
SQLE-206ENST00000523430 RNF141Q8WVD5 230 aa16.9■□□□□ 0.3
SQLE-206ENST00000523430 NABP2Q9BQ15 211 aa16.9■□□□□ 0.3
SQLE-206ENST00000523430 CEBPZOSA8MTT3 80 aa16.89■□□□□ 0.29
SQLE-206ENST00000523430 IGHV4-39P01824 125 aa16.89■□□□□ 0.29
SQLE-206ENST00000523430 APOA2P02652 100 aa16.89■□□□□ 0.29
SQLE-206ENST00000523430 ZNF266Q14584 549 aa16.89■□□□□ 0.29
SQLE-206ENST00000523430 DHRS7BQ6IAN0 325 aaPredicted RBP16.89■□□□□ 0.29
SQLE-206ENST00000523430 EIF5AL1Q6IS14 154 aaKnown RBP16.89■□□□□ 0.29
SQLE-206ENST00000523430 Q8N7P7 452 aa16.89■□□□□ 0.29
SQLE-206ENST00000523430 ATP5SQ99766 215 aa16.89■□□□□ 0.29
SQLE-206ENST00000523430 REG4Q9BYZ8 158 aa16.89■□□□□ 0.29
SQLE-206ENST00000523430 MED9Q9NWA0 146 aa16.89■□□□□ 0.29
SQLE-206ENST00000523430 LOC105371242A0A075B767 164 aa16.88■□□□□ 0.29
SQLE-206ENST00000523430 SRRM4A7MD48 611 aaKnown RBP16.88■□□□□ 0.29
SQLE-206ENST00000523430 H7C2Y5 167 aa16.88■□□□□ 0.29
SQLE-206ENST00000523430 IFNA17P01571 189 aa16.88■□□□□ 0.29
SQLE-206ENST00000523430 IGLV1-47P01700 117 aa16.88■□□□□ 0.29
SQLE-206ENST00000523430 ARHGDIBP52566 201 aa16.88■□□□□ 0.29
SQLE-206ENST00000523430 POU2AF1Q16633 256 aa16.88■□□□□ 0.29
SQLE-206ENST00000523430 HLA-DRB5Q30154 266 aa16.88■□□□□ 0.29
SQLE-206ENST00000523430 CCL19Q99731 98 aa16.88■□□□□ 0.29
SQLE-206ENST00000523430 CLEC7AQ9BXN2 247 aa16.88■□□□□ 0.29
SQLE-206ENST00000523430 PFDN2Q9UHV9 154 aa16.88■□□□□ 0.29
SQLE-206ENST00000523430 DOCK11Q5JSL3 2073 aa16.88■□□□□ 0.29
SQLE-206ENST00000523430 MFSD2BA6NFX1 497 aa16.88■□□□□ 0.29
SQLE-206ENST00000523430 C15orf61A6NNL5 157 aa16.88■□□□□ 0.29
SQLE-206ENST00000523430 HRASP01112 189 aa16.88■□□□□ 0.29
SQLE-206ENST00000523430 SPP1P10451 314 aa16.88■□□□□ 0.29
SQLE-206ENST00000523430 TMEM14EPQ6UXP3 125 aa16.88■□□□□ 0.29
SQLE-206ENST00000523430 TGIF2LXQ8IUE1 241 aa16.88■□□□□ 0.29
SQLE-206ENST00000523430 TNFRSF14Q92956 283 aa16.88■□□□□ 0.29
SQLE-206ENST00000523430 BPESC1Q9GZL8 116 aa16.88■□□□□ 0.29
SQLE-206ENST00000523430 RFNGQ9Y644 331 aa16.88■□□□□ 0.29
SQLE-206ENST00000523430 ZNF705EA8MWA4 302 aaPredicted RBP16.87■□□□□ 0.29
SQLE-206ENST00000523430 IGHV2-5P01817 119 aa16.87■□□□□ 0.29
SQLE-206ENST00000523430 ARF6P62330 175 aa16.87■□□□□ 0.29
SQLE-206ENST00000523430 AANATQ16613 207 aa16.87■□□□□ 0.29
SQLE-206ENST00000523430 NUP50Q9UKX7 468 aa16.87■□□□□ 0.29
SQLE-206ENST00000523430 UBR5O95071 2799 aaPredicted RBP16.87■□□□□ 0.29
SQLE-206ENST00000523430 ZFP36P26651 326 aaKnown RBP16.86■□□□□ 0.29
SQLE-206ENST00000523430 IL3RAP26951 378 aa16.86■□□□□ 0.29
SQLE-206ENST00000523430 SULT1A2P50226 295 aa16.86■□□□□ 0.29
SQLE-206ENST00000523430 RPS16P62249 146 aaKnown RBP16.86■□□□□ 0.29
SQLE-206ENST00000523430 STPG2Q8N412 459 aa16.86■□□□□ 0.29
SQLE-206ENST00000523430 HARBI1Q96MB7 349 aa16.86■□□□□ 0.29
SQLE-206ENST00000523430 SIRT7Q9NRC8 400 aa16.86■□□□□ 0.29
SQLE-206ENST00000523430 hCG_1809904A0A1W2PP81 198 aa16.86■□□□□ 0.29
SQLE-206ENST00000523430 A0A1W2PPE2 198 aa16.86■□□□□ 0.29
SQLE-206ENST00000523430 A0A1W2PR64 198 aa16.86■□□□□ 0.29
SQLE-206ENST00000523430 A0A1W2PRV1 198 aa16.86■□□□□ 0.29
SQLE-206ENST00000523430 SHOXO15266 292 aa16.86■□□□□ 0.29
SQLE-206ENST00000523430 SEC11BP0C7V7 166 aa16.86■□□□□ 0.29
SQLE-206ENST00000523430 SAA1P0DJI8 122 aaPredicted RBP16.86■□□□□ 0.29
SQLE-206ENST00000523430 MYOD1P15172 320 aa16.86■□□□□ 0.29
SQLE-206ENST00000523430 SPCS3P61009 180 aa16.86■□□□□ 0.29
SQLE-206ENST00000523430 ZNF429Q86V71 674 aa16.86■□□□□ 0.29
SQLE-206ENST00000523430 PNKDQ8N490 385 aa16.86■□□□□ 0.29
SQLE-206ENST00000523430 BEND2Q8NDZ0 799 aa16.86■□□□□ 0.29
SQLE-206ENST00000523430 OR4P4Q8NGL7 312 aa16.86■□□□□ 0.29
SQLE-206ENST00000523430 OR52E5Q8NH55 327 aa16.86■□□□□ 0.29
SQLE-206ENST00000523430 LRRC20Q8TCA0 184 aa16.86■□□□□ 0.29
SQLE-206ENST00000523430 CIB3Q96Q77 187 aaPredicted RBP16.86■□□□□ 0.29
SQLE-206ENST00000523430 FOXA2Q9Y261 457 aaPredicted RBP16.86■□□□□ 0.29
SQLE-206ENST00000523430 ATP6V0CP27449 155 aa16.85■□□□□ 0.29
SQLE-206ENST00000523430 PRRX1P54821 245 aa16.85■□□□□ 0.29
SQLE-206ENST00000523430 RUNX1Q01196 453 aa16.85■□□□□ 0.29
SQLE-206ENST00000523430 PDLIM3Q53GG5 364 aaPredicted RBP16.85■□□□□ 0.29
SQLE-206ENST00000523430 OR8G2PQ6IF36 304 aa16.85■□□□□ 0.29
SQLE-206ENST00000523430 TMEM14BQ9NUH8 114 aa16.85■□□□□ 0.29
SQLE-206ENST00000523430 BUB1B-PAK6H3BSN5 160 aa16.84■□□□□ 0.29
SQLE-206ENST00000523430 TOR2AQ5JU69 321 aa16.84■□□□□ 0.29
SQLE-206ENST00000523430 PDPNQ86YL7 162 aa16.84■□□□□ 0.29
SQLE-206ENST00000523430 OSR1Q8TAX0 266 aaPredicted RBP16.84■□□□□ 0.29
SQLE-206ENST00000523430 PCGF1Q9BSM1 259 aa16.84■□□□□ 0.29
SQLE-206ENST00000523430 TCF19Q9Y242 345 aa16.84■□□□□ 0.29
SQLE-206ENST00000523430 WASHC3Q9Y3C0 194 aa16.84■□□□□ 0.29
SQLE-206ENST00000523430 STRAPQ9Y3F4 350 aaKnown RBP16.84■□□□□ 0.29
SQLE-206ENST00000523430 A1L4Q6 167 aa16.84■□□□□ 0.29
SQLE-206ENST00000523430 DFFBO76075 338 aa16.84■□□□□ 0.29
SQLE-206ENST00000523430 ARG1P05089 322 aa16.84■□□□□ 0.29
SQLE-206ENST00000523430 IL6RP08887 468 aaPredicted RBP16.84■□□□□ 0.29
SQLE-206ENST00000523430 HBG1P69891 147 aa16.84■□□□□ 0.29
SQLE-206ENST00000523430 HBG2P69892 147 aa16.84■□□□□ 0.29
SQLE-206ENST00000523430 TMEM177Q53S58 311 aa16.84■□□□□ 0.29
SQLE-206ENST00000523430 LILRB2Q8N423 598 aa16.84■□□□□ 0.29
SQLE-206ENST00000523430 FLYWCH2Q96CP2 140 aaKnown RBP16.84■□□□□ 0.29
SQLE-206ENST00000523430 FAM210AQ96ND0 272 aa16.84■□□□□ 0.29
SQLE-206ENST00000523430 MYO18BQ8IUG5 2567 aa16.84■□□□□ 0.29
SQLE-206ENST00000523430 TET2Q6N021 2002 aaPredicted RBP16.83■□□□□ 0.28
SQLE-206ENST00000523430 IGHV3-72A0A0B4J1Y9 119 aa16.83■□□□□ 0.28
SQLE-206ENST00000523430 PMS2P5A8MQ11 134 aa16.83■□□□□ 0.28
SQLE-206ENST00000523430 I3L521 148 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms