RNA–Protein interactions for RNA: ENST00000522746.5

FAM49B-223, Transcript of family with sequence similarity 49 member B, human

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-223	ENST00000522746	TMEM204	Q9BSN7	226 aa		13.65	□□□□□ -0.22
FAM49B-223	ENST00000522746	SCRT1	Q9BWW7	348 aa		13.65	□□□□□ -0.22
FAM49B-223	ENST00000522746	TMEM140	Q9NV12	185 aa		13.65	□□□□□ -0.22
FAM49B-223	ENST00000522746	KAAG1	Q9UBP8	84 aa		13.65	□□□□□ -0.22
FAM49B-223	ENST00000522746	PMS2P5	A8MQ11	134 aa		13.64	□□□□□ -0.23
FAM49B-223	ENST00000522746	GPR37	O15354	613 aa		13.64	□□□□□ -0.23
FAM49B-223	ENST00000522746	PPIH	O43447	177 aa	Known RBP	13.64	□□□□□ -0.23
FAM49B-223	ENST00000522746	F12	P00748	615 aa	Predicted RBP	13.64	□□□□□ -0.23
FAM49B-223	ENST00000522746	IFNA17	P01571	189 aa		13.64	□□□□□ -0.23
FAM49B-223	ENST00000522746	SFTA3	P0C7M3	94 aa		13.64	□□□□□ -0.23
FAM49B-223	ENST00000522746	DAO	P14920	347 aa		13.64	□□□□□ -0.23
FAM49B-223	ENST00000522746	M6PR	P20645	277 aa		13.64	□□□□□ -0.23
FAM49B-223	ENST00000522746	RELB	Q01201	579 aa		13.64	□□□□□ -0.23
FAM49B-223	ENST00000522746	LRRC75B	Q2VPJ9	315 aa		13.64	□□□□□ -0.23
FAM49B-223	ENST00000522746	AKR1C8P	Q5T2L2	129 aa		13.64	□□□□□ -0.23
FAM49B-223	ENST00000522746	OR10A7	Q8NGE5	316 aa		13.64	□□□□□ -0.23
FAM49B-223	ENST00000522746	OR4A16	Q8NH70	328 aa		13.64	□□□□□ -0.23
FAM49B-223	ENST00000522746	ZFYVE26	Q68DK2	2539 aa		13.64	□□□□□ -0.23
FAM49B-223	ENST00000522746	UBE2L5P	A0A1B0GUS4	154 aa		13.64	□□□□□ -0.23
FAM49B-223	ENST00000522746	FAM90A9P	A6NNJ1	464 aa		13.64	□□□□□ -0.23
FAM49B-223	ENST00000522746	FAM157A	C9JC47	383 aa		13.64	□□□□□ -0.23
FAM49B-223	ENST00000522746	AARD	Q4LEZ3	155 aa		13.64	□□□□□ -0.23
FAM49B-223	ENST00000522746	PUSL1	Q8N0Z8	303 aa	Known RBP	13.64	□□□□□ -0.23
FAM49B-223	ENST00000522746	CIB3	Q96Q77	187 aa	Predicted RBP	13.64	□□□□□ -0.23
FAM49B-223	ENST00000522746	CARHSP1	Q9Y2V2	147 aa	Known RBP	13.64	□□□□□ -0.23
FAM49B-223	ENST00000522746	CACNA1B	Q00975	2339 aa		13.63	□□□□□ -0.23
FAM49B-223	ENST00000522746	CT45A6	P0DMU7	189 aa		13.63	□□□□□ -0.23
FAM49B-223	ENST00000522746	CT45A5	P0DMU8	189 aa		13.63	□□□□□ -0.23
FAM49B-223	ENST00000522746	CT45A7	P0DMV0	189 aa		13.63	□□□□□ -0.23
FAM49B-223	ENST00000522746	CCL20	P78556	96 aa		13.63	□□□□□ -0.23
FAM49B-223	ENST00000522746	GUK1	Q16774	197 aa		13.63	□□□□□ -0.23
FAM49B-223	ENST00000522746	COMMD1	Q8N668	190 aa		13.63	□□□□□ -0.23
FAM49B-223	ENST00000522746	ADTRP	Q96IZ2	230 aa		13.63	□□□□□ -0.23
FAM49B-223	ENST00000522746	SEC11C	Q9BY50	192 aa		13.63	□□□□□ -0.23
FAM49B-223	ENST00000522746	WDR61	Q9GZS3	305 aa	Known RBP	13.63	□□□□□ -0.23
FAM49B-223	ENST00000522746	TET2	Q6N021	2002 aa	Predicted RBP	13.63	□□□□□ -0.23
FAM49B-223	ENST00000522746	NUPL2	O15504	423 aa	Known RBP	13.62	□□□□□ -0.23
FAM49B-223	ENST00000522746	TAGLN	Q01995	201 aa	Known RBP	13.62	□□□□□ -0.23
FAM49B-223	ENST00000522746	SPSB3	Q6PJ21	355 aa		13.62	□□□□□ -0.23
FAM49B-223	ENST00000522746	RHOV	Q96L33	236 aa		13.62	□□□□□ -0.23
FAM49B-223	ENST00000522746	NKX6-2	Q9C056	277 aa	Predicted RBP	13.62	□□□□□ -0.23
FAM49B-223	ENST00000522746	H2AFB1	P0C5Y9	115 aa		13.62	□□□□□ -0.23
FAM49B-223	ENST00000522746	HNF4G	Q14541	408 aa		13.62	□□□□□ -0.23
FAM49B-223	ENST00000522746	OR4A47	Q6IF82	309 aa		13.62	□□□□□ -0.23
FAM49B-223	ENST00000522746	SVBP	Q8N300	66 aa		13.62	□□□□□ -0.23
FAM49B-223	ENST00000522746	EIF5A2	Q9GZV4	153 aa	Known RBP	13.62	□□□□□ -0.23
FAM49B-223	ENST00000522746	VSIR	Q9H7M9	311 aa		13.62	□□□□□ -0.23
FAM49B-223	ENST00000522746	C15orf62	A8K5M9	175 aa		13.61	□□□□□ -0.23
FAM49B-223	ENST00000522746	NDUFA2	O43678	99 aa		13.61	□□□□□ -0.23
FAM49B-223	ENST00000522746	DLX6	P56179	175 aa		13.61	□□□□□ -0.23
FAM49B-223	ENST00000522746	SPCS3	P61009	180 aa		13.61	□□□□□ -0.23
FAM49B-223	ENST00000522746	IGKV1-16	P04430	117 aa		13.61	□□□□□ -0.23
FAM49B-223	ENST00000522746	PPT1	P50897	306 aa		13.61	□□□□□ -0.23
FAM49B-223	ENST00000522746	ZNF833P	Q6ZTB9	187 aa		13.61	□□□□□ -0.23
FAM49B-223	ENST00000522746	OR10P1	Q8NGE3	313 aa		13.61	□□□□□ -0.23
FAM49B-223	ENST00000522746	ITLN2	Q8WWU7	325 aa	Predicted RBP	13.61	□□□□□ -0.23
FAM49B-223	ENST00000522746	TAF15	Q92804	592 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
FAM49B-223	ENST00000522746	PARD6G	Q9BYG4	376 aa	Predicted RBP	13.61	□□□□□ -0.23
FAM49B-223	ENST00000522746	LY6H	O94772	140 aa		13.6	□□□□□ -0.23
FAM49B-223	ENST00000522746	OR8U8	P0C7N1	319 aa		13.6	□□□□□ -0.23
FAM49B-223	ENST00000522746	PPOX	P50336	477 aa		13.6	□□□□□ -0.23
FAM49B-223	ENST00000522746	TMEM155	Q4W5P6	130 aa		13.6	□□□□□ -0.23
FAM49B-223	ENST00000522746	PSMG3	Q9BT73	122 aa	Predicted RBP	13.6	□□□□□ -0.23
FAM49B-223	ENST00000522746	SLC35D1	Q9NTN3	355 aa		13.6	□□□□□ -0.23
FAM49B-223	ENST00000522746	FAM74A7	A6NL05	159 aa		13.59	□□□□□ -0.23
FAM49B-223	ENST00000522746	C15orf61	A6NNL5	157 aa		13.59	□□□□□ -0.23
FAM49B-223	ENST00000522746	C19orf84	I3L1E1	186 aa		13.59	□□□□□ -0.23
FAM49B-223	ENST00000522746	FAM74A3	Q4VXF1	159 aa		13.59	□□□□□ -0.23
FAM49B-223	ENST00000522746	C4orf17	Q53FE4	359 aa		13.59	□□□□□ -0.23
FAM49B-223	ENST00000522746	AVPI1	Q5T686	147 aa		13.59	□□□□□ -0.23
FAM49B-223	ENST00000522746	SP5	Q6BEB4	398 aa	Predicted RBP	13.59	□□□□□ -0.23
FAM49B-223	ENST00000522746	LFNG	Q8NES3	379 aa		13.59	□□□□□ -0.23
FAM49B-223	ENST00000522746	OR52E5	Q8NH55	327 aa		13.59	□□□□□ -0.23
FAM49B-223	ENST00000522746	SFT2D1	Q8WV19	159 aa		13.59	□□□□□ -0.23
FAM49B-223	ENST00000522746	TMEM147	Q9BVK8	224 aa		13.59	□□□□□ -0.23
FAM49B-223	ENST00000522746	MRPL20	Q9BYC9	149 aa	Known RBP	13.59	□□□□□ -0.23
FAM49B-223	ENST00000522746	RPRM	Q9NS64	109 aa		13.59	□□□□□ -0.23
FAM49B-223	ENST00000522746	DNASE2	O00115	360 aa	Predicted RBP	13.59	□□□□□ -0.23
FAM49B-223	ENST00000522746	ARG1	P05089	322 aa		13.59	□□□□□ -0.23
FAM49B-223	ENST00000522746	VDAC2	P45880	294 aa	Predicted RBP	13.59	□□□□□ -0.23
FAM49B-223	ENST00000522746	REG1B	P48304	166 aa		13.59	□□□□□ -0.23
FAM49B-223	ENST00000522746	PEA15	Q15121	130 aa		13.59	□□□□□ -0.23
FAM49B-223	ENST00000522746	ATP6V1F	Q16864	119 aa		13.59	□□□□□ -0.23
FAM49B-223	ENST00000522746	PDLIM3	Q53GG5	364 aa	Predicted RBP	13.59	□□□□□ -0.23
FAM49B-223	ENST00000522746	DPPA3	Q6W0C5	159 aa		13.59	□□□□□ -0.23
FAM49B-223	ENST00000522746	ZNF429	Q86V71	674 aa		13.59	□□□□□ -0.23
FAM49B-223	ENST00000522746	OR13D1	Q8NGV5	346 aa		13.59	□□□□□ -0.23
FAM49B-223	ENST00000522746	PINX1	Q96BK5	328 aa	Known RBP	13.59	□□□□□ -0.23
FAM49B-223	ENST00000522746	RARRES2	Q99969	163 aa		13.59	□□□□□ -0.23
FAM49B-223	ENST00000522746	TCF19	Q9Y242	345 aa		13.59	□□□□□ -0.23
FAM49B-223	ENST00000522746		A0A1W2PPR1	153 aa		13.58	□□□□□ -0.24
FAM49B-223	ENST00000522746	SRRM4	A7MD48	611 aa	Known RBP	13.58	□□□□□ -0.24
FAM49B-223	ENST00000522746	IGHV2-70	P01814	119 aa		13.58	□□□□□ -0.24
FAM49B-223	ENST00000522746	PRB1	P04280	392 aa		13.58	□□□□□ -0.24
FAM49B-223	ENST00000522746	MYOD1	P15172	320 aa		13.58	□□□□□ -0.24
FAM49B-223	ENST00000522746	NPBWR1	P48145	328 aa		13.58	□□□□□ -0.24
FAM49B-223	ENST00000522746	GNB2	P62879	340 aa		13.58	□□□□□ -0.24
FAM49B-223	ENST00000522746	TLE4	Q04727	773 aa		13.58	□□□□□ -0.24
FAM49B-223	ENST00000522746	DIAPH2-AS1	Q14236	149 aa		13.58	□□□□□ -0.24
FAM49B-223	ENST00000522746	RTL8B	Q17RB0	113 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms