RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 CORTO00230 105 aa11.77□□□□□ -0.53
SYNPO-205ENST00000522122 ZNF137PP52743 207 aa11.77□□□□□ -0.53
SYNPO-205ENST00000522122 OR5P3Q8WZ94 311 aa11.77□□□□□ -0.53
SYNPO-205ENST00000522122 PARLQ9H300 379 aa11.77□□□□□ -0.53
SYNPO-205ENST00000522122 CLEC5AQ9NY25 188 aa11.77□□□□□ -0.53
SYNPO-205ENST00000522122 UCP1P25874 307 aa11.77□□□□□ -0.53
SYNPO-205ENST00000522122 MC5RP33032 325 aa11.77□□□□□ -0.53
SYNPO-205ENST00000522122 RPL8P62917 257 aaKnown RBP11.77□□□□□ -0.53
SYNPO-205ENST00000522122 IBA57Q5T440 356 aaKnown RBP11.77□□□□□ -0.53
SYNPO-205ENST00000522122 IGKV1-9A0A0C4DH69 117 aa11.77□□□□□ -0.53
SYNPO-205ENST00000522122 J3QW42 95 aa11.77□□□□□ -0.53
SYNPO-205ENST00000522122 KBTBD11O94819 623 aa11.77□□□□□ -0.53
SYNPO-205ENST00000522122 RPLP1P05386 114 aaKnown RBP11.77□□□□□ -0.53
SYNPO-205ENST00000522122 TRGC1P0CF51 173 aa11.77□□□□□ -0.53
SYNPO-205ENST00000522122 SUPT4H1P63272 117 aaKnown RBP11.77□□□□□ -0.53
SYNPO-205ENST00000522122 ZNF385CQ66K41 422 aaPredicted RBP11.77□□□□□ -0.53
SYNPO-205ENST00000522122 VWA1Q6PCB0 445 aa11.77□□□□□ -0.53
SYNPO-205ENST00000522122 SSX8Q7RTT4 187 aa11.77□□□□□ -0.53
SYNPO-205ENST00000522122 DIRC2Q96SL1 478 aa11.77□□□□□ -0.53
SYNPO-205ENST00000522122 TMEM250H0YL14 139 aa11.76□□□□□ -0.53
SYNPO-205ENST00000522122 ZIC3O60481 467 aa11.76□□□□□ -0.53
SYNPO-205ENST00000522122 C1orf185Q5T7R7 199 aa11.76□□□□□ -0.53
SYNPO-205ENST00000522122 CALHM1Q8IU99 346 aa11.76□□□□□ -0.53
SYNPO-205ENST00000522122 LYZL4Q96KX0 146 aa11.76□□□□□ -0.53
SYNPO-205ENST00000522122 HSPB8Q9UJY1 196 aa11.76□□□□□ -0.53
SYNPO-205ENST00000522122 UFC1Q9Y3C8 167 aa11.76□□□□□ -0.53
SYNPO-205ENST00000522122 KLHDC3Q9BQ90 382 aa11.76□□□□□ -0.53
SYNPO-205ENST00000522122 PLSCR2Q9NRY7 297 aa11.76□□□□□ -0.53
SYNPO-205ENST00000522122 IL17BQ9UHF5 180 aa11.76□□□□□ -0.53
SYNPO-205ENST00000522122 JPT1Q9UK76 154 aa11.76□□□□□ -0.53
SYNPO-205ENST00000522122 HIGD1AQ9Y241 93 aa11.76□□□□□ -0.53
SYNPO-205ENST00000522122 TCF19Q9Y242 345 aa11.76□□□□□ -0.53
SYNPO-205ENST00000522122 COL4A3Q01955 1670 aa11.76□□□□□ -0.53
SYNPO-205ENST00000522122 CD99P14209 185 aa11.76□□□□□ -0.53
SYNPO-205ENST00000522122 FADS6Q8N9I5 356 aa11.76□□□□□ -0.53
SYNPO-205ENST00000522122 TMEM116Q8NCL8 245 aa11.76□□□□□ -0.53
SYNPO-205ENST00000522122 SPTBN1Q01082 2364 aaKnown RBP11.76□□□□□ -0.53
SYNPO-205ENST00000522122 IGLV3-32A0A0A0MS00 114 aa11.76□□□□□ -0.53
SYNPO-205ENST00000522122 DOLPP1Q86YN1 238 aa11.76□□□□□ -0.53
SYNPO-205ENST00000522122 TMEM45BQ96B21 275 aa11.76□□□□□ -0.53
SYNPO-205ENST00000522122 RCC1LQ96I51 464 aaKnown RBP11.76□□□□□ -0.53
SYNPO-205ENST00000522122 RPL30P62888 115 aaKnown RBP11.75□□□□□ -0.53
SYNPO-205ENST00000522122 RTP5Q14D33 572 aa11.75□□□□□ -0.53
SYNPO-205ENST00000522122 Q1RN00 199 aa11.75□□□□□ -0.53
SYNPO-205ENST00000522122 HLA-DQA1P01909 254 aa11.75□□□□□ -0.53
SYNPO-205ENST00000522122 PPOXP50336 477 aa11.75□□□□□ -0.53
SYNPO-205ENST00000522122 SNRNP40Q96DI7 357 aaKnown RBP11.75□□□□□ -0.53
SYNPO-205ENST00000522122 LINC00587B1AMM8 73 aa11.75□□□□□ -0.53
SYNPO-205ENST00000522122 CTSSP25774 331 aa11.75□□□□□ -0.53
SYNPO-205ENST00000522122 ABHD12Q8N2K0 398 aa11.75□□□□□ -0.53
SYNPO-205ENST00000522122 LOXL4Q96JB6 756 aa11.75□□□□□ -0.53
SYNPO-205ENST00000522122 DMRTA2Q96SC8 542 aa11.75□□□□□ -0.53
SYNPO-205ENST00000522122 KIAA1671Q9BY89 1806 aa11.75□□□□□ -0.53
SYNPO-205ENST00000522122 SRP19P09132 144 aaKnown RBP11.75□□□□□ -0.53
SYNPO-205ENST00000522122 ARL14EPLP0DKL9 152 aa11.75□□□□□ -0.53
SYNPO-205ENST00000522122 SCGB1C2P0DMR2 95 aa11.75□□□□□ -0.53
SYNPO-205ENST00000522122 ZNF837Q96EG3 531 aaPredicted RBP11.75□□□□□ -0.53
SYNPO-205ENST00000522122 QTRT1Q9BXR0 403 aaKnown RBP11.75□□□□□ -0.53
SYNPO-205ENST00000522122 C5orf52A6NGY3 159 aa11.74□□□□□ -0.53
SYNPO-205ENST00000522122 TRBV23-1A0A0A0MS06 115 aa11.74□□□□□ -0.53
SYNPO-205ENST00000522122 GBGT1Q8N5D6 347 aa11.74□□□□□ -0.53
SYNPO-205ENST00000522122 SPSB4Q96A44 273 aa11.74□□□□□ -0.53
SYNPO-205ENST00000522122 IGLV3-12A0A075B6K2 115 aa11.74□□□□□ -0.53
SYNPO-205ENST00000522122 TMSB15BA0A087X1C1 80 aa11.74□□□□□ -0.53
SYNPO-205ENST00000522122 CDX4O14627 284 aaPredicted RBP11.74□□□□□ -0.53
SYNPO-205ENST00000522122 DDTP30046 118 aa11.74□□□□□ -0.53
SYNPO-205ENST00000522122 SLC35E4Q6ICL7 350 aa11.74□□□□□ -0.53
SYNPO-205ENST00000522122 ZNF788Q6ZQV5 615 aa11.74□□□□□ -0.53
SYNPO-205ENST00000522122 MMD2Q8IY49 270 aa11.74□□□□□ -0.53
SYNPO-205ENST00000522122 WFDC1Q9HC57 220 aa11.74□□□□□ -0.53
SYNPO-205ENST00000522122 IGHV3-72A0A0B4J1Y9 119 aa11.74□□□□□ -0.53
SYNPO-205ENST00000522122 F2RL2O00254 374 aa11.74□□□□□ -0.53
SYNPO-205ENST00000522122 DLL1O00548 723 aa11.74□□□□□ -0.53
SYNPO-205ENST00000522122 C8orf88P0DMB2 117 aa11.74□□□□□ -0.53
SYNPO-205ENST00000522122 PRNTQ86SH4 94 aa11.74□□□□□ -0.53
SYNPO-205ENST00000522122 SCNM1Q9BWG6 230 aa11.74□□□□□ -0.53
SYNPO-205ENST00000522122 PLAUP00749 431 aa11.73□□□□□ -0.53
SYNPO-205ENST00000522122 HOXA5P20719 270 aa11.73□□□□□ -0.53
SYNPO-205ENST00000522122 HCP5Q6MZN7 132 aa11.73□□□□□ -0.53
SYNPO-205ENST00000522122 IDI2-AS1Q9NZ38 188 aa11.73□□□□□ -0.53
SYNPO-205ENST00000522122 ZNF319Q9P2F9 582 aa11.73□□□□□ -0.53
SYNPO-205ENST00000522122 NCOR1O75376 2440 aa11.73□□□□□ -0.53
SYNPO-205ENST00000522122 PGPA6NDG6 321 aa11.73□□□□□ -0.53
SYNPO-205ENST00000522122 COL5A1-AS1Q5SY13 56 aa11.73□□□□□ -0.53
SYNPO-205ENST00000522122 CCDC144NLQ6NUI1 221 aa11.73□□□□□ -0.53
SYNPO-205ENST00000522122 IMMP1LQ96LU5 166 aa11.73□□□□□ -0.53
SYNPO-205ENST00000522122 REPIN1Q9BWE0 567 aaKnown RBP11.73□□□□□ -0.53
SYNPO-205ENST00000522122 MRPL18Q9H0U6 180 aaKnown RBP11.73□□□□□ -0.53
SYNPO-205ENST00000522122 ZNF430Q9H8G1 570 aaPredicted RBP11.73□□□□□ -0.53
SYNPO-205ENST00000522122 DNAJC4Q9NNZ3 241 aa11.73□□□□□ -0.53
SYNPO-205ENST00000522122 ZDHHC8Q9ULC8 765 aa11.73□□□□□ -0.53
SYNPO-205ENST00000522122 A0A1B0GW64 132 aa11.73□□□□□ -0.53
SYNPO-205ENST00000522122 SSTR5P35346 364 aa11.73□□□□□ -0.53
SYNPO-205ENST00000522122 LTBRP36941 435 aa11.73□□□□□ -0.53
SYNPO-205ENST00000522122 NRN1LQ496H8 165 aa11.73□□□□□ -0.53
SYNPO-205ENST00000522122 KRTCAP3Q53RY4 240 aa11.73□□□□□ -0.53
SYNPO-205ENST00000522122 LRTM2Q8N967 370 aa11.73□□□□□ -0.53
SYNPO-205ENST00000522122 ZNF716A6NP11 495 aa11.73□□□□□ -0.53
SYNPO-205ENST00000522122 CSRP1P21291 193 aaKnown RBP11.73□□□□□ -0.53
SYNPO-205ENST00000522122 RND2P52198 227 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms