RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 ADAM30Q9UKF2 790 aa16.08■□□□□ 0.16
TRIM35-203ENST00000521253 PRKDCP78527 4128 aaKnown RBP16.08■□□□□ 0.16
TRIM35-203ENST00000521253 HRH1P35367 487 aa16.07■□□□□ 0.16
TRIM35-203ENST00000521253 HERV-K104P61576 105 aa16.07■□□□□ 0.16
TRIM35-203ENST00000521253 PRSS8Q16651 343 aa16.07■□□□□ 0.16
TRIM35-203ENST00000521253 ZBTB34Q8NCN2 500 aa16.07■□□□□ 0.16
TRIM35-203ENST00000521253 OR4S2Q8NH73 311 aa16.07■□□□□ 0.16
TRIM35-203ENST00000521253 RCC1LQ96I51 464 aaKnown RBP16.07■□□□□ 0.16
TRIM35-203ENST00000521253 BCL7BQ9BQE9 202 aa16.07■□□□□ 0.16
TRIM35-203ENST00000521253 ZNF2Q9BSG1 426 aaPredicted RBP16.07■□□□□ 0.16
TRIM35-203ENST00000521253 GNB4Q9HAV0 340 aa16.07■□□□□ 0.16
TRIM35-203ENST00000521253 EXTL2Q9UBQ6 330 aa16.07■□□□□ 0.16
TRIM35-203ENST00000521253 VSIG4Q9Y279 399 aa16.07■□□□□ 0.16
TRIM35-203ENST00000521253 SULT1C2O00338 296 aa16.06■□□□□ 0.16
TRIM35-203ENST00000521253 SAA1P0DJI8 122 aaPredicted RBP16.06■□□□□ 0.16
TRIM35-203ENST00000521253 PDLIM3Q53GG5 364 aaPredicted RBP16.06■□□□□ 0.16
TRIM35-203ENST00000521253 ZNF818PQ6ZRF7 136 aa16.06■□□□□ 0.16
TRIM35-203ENST00000521253 OR5M8Q8NGP6 311 aa16.06■□□□□ 0.16
TRIM35-203ENST00000521253 MIXL1Q9H2W2 232 aa16.06■□□□□ 0.16
TRIM35-203ENST00000521253 GNRHRP30968 328 aa16.05■□□□□ 0.16
TRIM35-203ENST00000521253 RCVRNP35243 200 aa16.05■□□□□ 0.16
TRIM35-203ENST00000521253 PYHIN1Q6K0P9 492 aa16.05■□□□□ 0.16
TRIM35-203ENST00000521253 VKORC1L1Q8N0U8 176 aa16.05■□□□□ 0.16
TRIM35-203ENST00000521253 DYNC2LI1Q8TCX1 351 aa16.05■□□□□ 0.16
TRIM35-203ENST00000521253 MOB3AQ96BX8 217 aa16.05■□□□□ 0.16
TRIM35-203ENST00000521253 OR5B12Q96R08 314 aa16.05■□□□□ 0.16
TRIM35-203ENST00000521253 I3L521 148 aa16.04■□□□□ 0.16
TRIM35-203ENST00000521253 CTDSP2O14595 271 aa16.04■□□□□ 0.16
TRIM35-203ENST00000521253 KIR2DS2P43631 304 aa16.04■□□□□ 0.16
TRIM35-203ENST00000521253 RAB25P57735 213 aa16.04■□□□□ 0.16
TRIM35-203ENST00000521253 TNXAQ16473 311 aa16.04■□□□□ 0.16
TRIM35-203ENST00000521253 RNASE12Q5GAN4 147 aaKnown RBP16.04■□□□□ 0.16
TRIM35-203ENST00000521253 ZNF430Q9H8G1 570 aaPredicted RBP16.04■□□□□ 0.16
TRIM35-203ENST00000521253 RGS5O15539 181 aa16.03■□□□□ 0.16
TRIM35-203ENST00000521253 RAMP3O60896 148 aa16.03■□□□□ 0.16
TRIM35-203ENST00000521253 NOL3O60936 208 aaKnown RBP16.03■□□□□ 0.16
TRIM35-203ENST00000521253 DUS4LO95620 317 aaKnown RBP16.03■□□□□ 0.16
TRIM35-203ENST00000521253 PRB2P02812 416 aaPredicted RBP16.03■□□□□ 0.16
TRIM35-203ENST00000521253 RUNX1Q01196 453 aa16.03■□□□□ 0.16
TRIM35-203ENST00000521253 FHL3Q13643 280 aa16.03■□□□□ 0.16
TRIM35-203ENST00000521253 ASPHD1Q5U4P2 390 aa16.03■□□□□ 0.16
TRIM35-203ENST00000521253 LAX1Q8IWV1 398 aa16.03■□□□□ 0.16
TRIM35-203ENST00000521253 SPAG16Q8N0X2 631 aa16.03■□□□□ 0.16
TRIM35-203ENST00000521253 OR5T1Q8NG75 326 aa16.03■□□□□ 0.16
TRIM35-203ENST00000521253 OR11H1Q8NG94 326 aa16.03■□□□□ 0.16
TRIM35-203ENST00000521253 OR6F1Q8NGZ6 308 aa16.03■□□□□ 0.16
TRIM35-203ENST00000521253 ISOC1Q96CN7 298 aa16.03■□□□□ 0.16
TRIM35-203ENST00000521253 MS4A10Q96PG2 267 aa16.03■□□□□ 0.16
TRIM35-203ENST00000521253 ABHD1Q96SE0 405 aa16.03■□□□□ 0.16
TRIM35-203ENST00000521253 FXYD6Q9H0Q3 95 aa16.03■□□□□ 0.16
TRIM35-203ENST00000521253 CCDC59Q9P031 241 aaKnown RBP16.03■□□□□ 0.16
TRIM35-203ENST00000521253 SCOCQ9UIL1 159 aa16.03■□□□□ 0.16
TRIM35-203ENST00000521253 H3BMQ9 156 aa16.02■□□□□ 0.16
TRIM35-203ENST00000521253 TPPPO94811 219 aa16.02■□□□□ 0.16
TRIM35-203ENST00000521253 CD40LGP29965 261 aa16.02■□□□□ 0.16
TRIM35-203ENST00000521253 CATR1Q13166 79 aa16.02■□□□□ 0.16
TRIM35-203ENST00000521253 FOXB2Q5VYV0 432 aa16.02■□□□□ 0.16
TRIM35-203ENST00000521253 POC5Q8NA72 575 aa16.02■□□□□ 0.16
TRIM35-203ENST00000521253 OR51H1Q8NH63 302 aa16.02■□□□□ 0.16
TRIM35-203ENST00000521253 OR52I2Q8NH67 350 aa16.02■□□□□ 0.16
TRIM35-203ENST00000521253 SRSF12Q8WXF0 261 aaKnown RBP16.02■□□□□ 0.16
TRIM35-203ENST00000521253 BORCS5Q969J3 196 aa16.02■□□□□ 0.16
TRIM35-203ENST00000521253 TMEM68Q96MH6 324 aa16.02■□□□□ 0.16
TRIM35-203ENST00000521253 KLK11Q9UBX7 282 aa16.02■□□□□ 0.16
TRIM35-203ENST00000521253 TNCP24821 2201 aa16.01■□□□□ 0.15
TRIM35-203ENST00000521253 MSGN1A6NI15 193 aa16.01■□□□□ 0.15
TRIM35-203ENST00000521253 RBFOX2O43251 390 aaKnown RBP eCLIP16.01■□□□□ 0.15
TRIM35-203ENST00000521253 CREBL2O60519 120 aaPredicted RBP16.01■□□□□ 0.15
TRIM35-203ENST00000521253 OR2A4O95047 310 aa16.01■□□□□ 0.15
TRIM35-203ENST00000521253 APELAP0DMC3 54 aa16.01■□□□□ 0.15
TRIM35-203ENST00000521253 TPPP2P59282 170 aa16.01■□□□□ 0.15
TRIM35-203ENST00000521253 TSPAN5P62079 268 aa16.01■□□□□ 0.15
TRIM35-203ENST00000521253 AADACL3Q5VUY0 350 aa16.01■□□□□ 0.15
TRIM35-203ENST00000521253 MMD2Q8IY49 270 aa16.01■□□□□ 0.15
TRIM35-203ENST00000521253 PUSL1Q8N0Z8 303 aaKnown RBP16.01■□□□□ 0.15
TRIM35-203ENST00000521253 OR1N2Q8NGR9 330 aa16.01■□□□□ 0.15
TRIM35-203ENST00000521253 VSTM2AQ8TAG5 236 aa16.01■□□□□ 0.15
TRIM35-203ENST00000521253 RHOVQ96L33 236 aa16.01■□□□□ 0.15
TRIM35-203ENST00000521253 OR2A7Q96R45 310 aa16.01■□□□□ 0.15
TRIM35-203ENST00000521253 PHB2Q99623 299 aa16.01■□□□□ 0.15
TRIM35-203ENST00000521253 ALX4Q9H161 411 aaPredicted RBP16.01■□□□□ 0.15
TRIM35-203ENST00000521253 SLA2Q9H6Q3 261 aa16.01■□□□□ 0.15
TRIM35-203ENST00000521253 ACTL6BO94805 426 aa16■□□□□ 0.15
TRIM35-203ENST00000521253 KBTBD11O94819 623 aa16■□□□□ 0.15
TRIM35-203ENST00000521253 HRASP01112 189 aa16■□□□□ 0.15
TRIM35-203ENST00000521253 TRGV3P03979 118 aa16■□□□□ 0.15
TRIM35-203ENST00000521253 C10orf55Q5SWW7 151 aa16■□□□□ 0.15
TRIM35-203ENST00000521253 SSX9Q7RTT3 188 aa16■□□□□ 0.15
TRIM35-203ENST00000521253 TMEM167AQ8TBQ9 72 aa16■□□□□ 0.15
TRIM35-203ENST00000521253 C15orf40Q8WUR7 153 aa16■□□□□ 0.15
TRIM35-203ENST00000521253 MCRIP2Q9BUT9 160 aaKnown RBP16■□□□□ 0.15
TRIM35-203ENST00000521253 ZNF355PQ9NSJ1 428 aa16■□□□□ 0.15
TRIM35-203ENST00000521253 MTFP1Q9UDX5 166 aa16■□□□□ 0.15
TRIM35-203ENST00000521253 CEPT1Q9Y6K0 416 aa16■□□□□ 0.15
TRIM35-203ENST00000521253 TGP01266 2768 aa15.99■□□□□ 0.15
TRIM35-203ENST00000521253 H3BUA1 57 aa15.99■□□□□ 0.15
TRIM35-203ENST00000521253 M0QYG6 137 aa15.99■□□□□ 0.15
TRIM35-203ENST00000521253 PGLYRP1O75594 196 aaPredicted RBP15.99■□□□□ 0.15
TRIM35-203ENST00000521253 IGHV3-11P01762 117 aa15.99■□□□□ 0.15
TRIM35-203ENST00000521253 RLN1P04808 185 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms