RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 hCG_1809904A0A1W2PP81 198 aa9.42□□□□□ -0.9
CLK4-206ENST00000520878 A0A1W2PR64 198 aa9.42□□□□□ -0.9
CLK4-206ENST00000520878 A0A1W2PRV1 198 aa9.42□□□□□ -0.9
CLK4-206ENST00000520878 CRYBA1P05813 215 aa9.42□□□□□ -0.9
CLK4-206ENST00000520878 PLA2G5P39877 138 aa9.42□□□□□ -0.9
CLK4-206ENST00000520878 ZNF134P52741 427 aa9.42□□□□□ -0.9
CLK4-206ENST00000520878 ADIPOQQ15848 244 aa9.42□□□□□ -0.9
CLK4-206ENST00000520878 LOC105371267A0A1B0GV96 52 aa9.42□□□□□ -0.9
CLK4-206ENST00000520878 APOA2P02652 100 aa9.42□□□□□ -0.9
CLK4-206ENST00000520878 COX7A1P24310 79 aa9.42□□□□□ -0.9
CLK4-206ENST00000520878 RBMS3Q6XE24 437 aaKnown RBP9.42□□□□□ -0.9
CLK4-206ENST00000520878 MS4A5Q9H3V2 200 aa9.42□□□□□ -0.9
CLK4-206ENST00000520878 ADGRG4Q8IZF6 3080 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 SAA2-SAA4A0A096LPE2 208 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 A0A1W2PRD5 423 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 A0A1W2PRF3 423 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 A0A1W2PRM7 423 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 H3BQ15 152 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 K7ENP7 123 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 CYB5BO43169 146 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 CD5P06127 495 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 SAA2P0DJI9 122 aaPredicted RBP9.41□□□□□ -0.9
CLK4-206ENST00000520878 MYOD1P15172 320 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 TFF3Q07654 80 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 UTF1Q5T230 341 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 COMMD5Q9GZQ3 224 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 WDR61Q9GZS3 305 aaKnown RBP9.41□□□□□ -0.9
CLK4-206ENST00000520878 ELOVL5Q9NYP7 299 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 CARHSP1Q9Y2V2 147 aaKnown RBP9.41□□□□□ -0.9
CLK4-206ENST00000520878 KMT2EQ8IZD2 1858 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 A0A0U1RQK1 487 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.41□□□□□ -0.9
CLK4-206ENST00000520878 PSMB3P49720 205 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 HTD2P86397 168 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 CT45A1Q5HYN5 189 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 STUMQ69YW2 141 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 Q8NA96 180 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 CT45A3Q8NHU0 189 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 ACTR3CQ9C0K3 210 aaPredicted RBP9.41□□□□□ -0.9
CLK4-206ENST00000520878 IDI2-AS1Q9NZ38 188 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 KIAA1456Q9P272 454 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 BTBD17A6NE02 478 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 MMP23AO75900 390 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 HRASP01112 189 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 CCKARP32238 428 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 RAB31Q13636 194 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 NECAP1Q8NC96 275 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 C5orf30Q96GV9 206 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 RCC1LQ96I51 464 aaKnown RBP9.41□□□□□ -0.9
CLK4-206ENST00000520878 SLX1AQ9BQ83 275 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 GAL3ST2Q9H3Q3 398 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 ATMQ13315 3056 aa9.41□□□□□ -0.9
CLK4-206ENST00000520878 PLAUP00749 431 aa9.4□□□□□ -0.9
CLK4-206ENST00000520878 PLGLAQ15195 96 aa9.4□□□□□ -0.9
CLK4-206ENST00000520878 ZNF714Q96N38 554 aa9.4□□□□□ -0.9
CLK4-206ENST00000520878 SMIM7Q9BQ49 75 aa9.4□□□□□ -0.9
CLK4-206ENST00000520878 TMEM204Q9BSN7 226 aa9.4□□□□□ -0.9
CLK4-206ENST00000520878 PLEKHA3Q9HB20 300 aa9.4□□□□□ -0.9
CLK4-206ENST00000520878 TMEM106BQ9NUM4 274 aa9.4□□□□□ -0.9
CLK4-206ENST00000520878 YPEL1O60688 119 aa9.4□□□□□ -0.9
CLK4-206ENST00000520878 SCAF4O95104 1147 aaKnown RBP9.4□□□□□ -0.9
CLK4-206ENST00000520878 DLX1P56177 255 aa9.4□□□□□ -0.9
CLK4-206ENST00000520878 LY6DQ14210 128 aa9.4□□□□□ -0.9
CLK4-206ENST00000520878 FAM169BQ8N8A8 192 aa9.4□□□□□ -0.9
CLK4-206ENST00000520878 YPEL2Q96QA6 119 aa9.4□□□□□ -0.9
CLK4-206ENST00000520878 ARV1Q9H2C2 271 aa9.4□□□□□ -0.9
CLK4-206ENST00000520878 AURKAIP1Q9NWT8 199 aaPredicted RBP9.4□□□□□ -0.9
CLK4-206ENST00000520878 FAM208BQ5VWN6 2430 aa9.4□□□□□ -0.91
CLK4-206ENST00000520878 FAM90A26D6RGX4 464 aa9.4□□□□□ -0.91
CLK4-206ENST00000520878 C15orf65H3BRN8 121 aa9.4□□□□□ -0.91
CLK4-206ENST00000520878 IGHV3-48P01763 117 aa9.4□□□□□ -0.91
CLK4-206ENST00000520878 ACAA1P09110 424 aaPredicted RBP9.4□□□□□ -0.91
CLK4-206ENST00000520878 HNF1AP20823 631 aa9.4□□□□□ -0.91
CLK4-206ENST00000520878 CD1BP29016 333 aa9.4□□□□□ -0.91
CLK4-206ENST00000520878 LRRC75BQ2VPJ9 315 aa9.4□□□□□ -0.91
CLK4-206ENST00000520878 RAB39BQ96DA2 213 aa9.4□□□□□ -0.91
CLK4-206ENST00000520878 TCF19Q9Y242 345 aa9.4□□□□□ -0.91
CLK4-206ENST00000520878 ACACBO00763 2458 aa9.39□□□□□ -0.91
CLK4-206ENST00000520878 LY6HO94772 140 aa9.39□□□□□ -0.91
CLK4-206ENST00000520878 GNB1P62873 340 aa9.39□□□□□ -0.91
CLK4-206ENST00000520878 OR13D1Q8NGV5 346 aa9.39□□□□□ -0.91
CLK4-206ENST00000520878 ACY3Q96HD9 319 aa9.39□□□□□ -0.91
CLK4-206ENST00000520878 HARBI1Q96MB7 349 aa9.39□□□□□ -0.91
CLK4-206ENST00000520878 HSPB7Q9UBY9 170 aa9.39□□□□□ -0.91
CLK4-206ENST00000520878 COL27A1Q8IZC6 1860 aaPredicted RBP9.39□□□□□ -0.91
CLK4-206ENST00000520878 IGLV3-9A0A075B6K5 115 aa9.39□□□□□ -0.91
CLK4-206ENST00000520878 J3QR06 171 aa9.39□□□□□ -0.91
CLK4-206ENST00000520878 DLK1P80370 383 aa9.39□□□□□ -0.91
CLK4-206ENST00000520878 ACOT6Q3I5F7 207 aaPredicted RBP9.39□□□□□ -0.91
CLK4-206ENST00000520878 TMEM41BQ5BJD5 291 aa9.39□□□□□ -0.91
CLK4-206ENST00000520878 LYPD2Q6UXB3 125 aa9.39□□□□□ -0.91
CLK4-206ENST00000520878 RNASE6Q93091 150 aaKnown RBP9.39□□□□□ -0.91
CLK4-206ENST00000520878 TVP23CQ96ET8 276 aa9.39□□□□□ -0.91
CLK4-206ENST00000520878 GAFA1Q96PS6 74 aa9.39□□□□□ -0.91
CLK4-206ENST00000520878 PPIHO43447 177 aaKnown RBP9.39□□□□□ -0.91
CLK4-206ENST00000520878 THBS3P49746 956 aa9.39□□□□□ -0.91
CLK4-206ENST00000520878 HAPLN4Q86UW8 402 aa9.39□□□□□ -0.91
CLK4-206ENST00000520878 AGMATQ9BSE5 352 aa9.39□□□□□ -0.91
CLK4-206ENST00000520878 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.39□□□□□ -0.914e-7■■■■■ 47
CLK4-206ENST00000520878 SNRPCP09234 159 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms