RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 BRWD1-AS2P59051 145 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 UBE2KP61086 200 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 GNB2P62879 340 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 RUNX1Q01196 453 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 CATR1Q13166 79 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 KIAA0141Q14154 515 aaPredicted RBP4.2□□□□□ -1.74
SDC2-204ENST00000519914 P2RY6Q15077 328 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 TRIP6Q15654 476 aaKnown RBP4.2□□□□□ -1.74
SDC2-204ENST00000519914 ZNF726P1Q15940 193 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 TMEM241Q24JQ0 296 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 SMIM21Q3B7S5 101 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 ALKBH6Q3KRA9 238 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 AKIRIN2Q53H80 203 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 TMEM41BQ5BJD5 291 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 PYY3Q5JQD4 70 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 SPATA46Q5T0L3 261 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 FAM90A2PQ658T7 463 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 LEMD1Q68G75 181 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 IGFL3Q6UXB1 125 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 WDR82Q6UXN9 313 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 Q6ZR03 302 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 MRGPRGQ86SM5 289 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 ZFP82Q8N141 532 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 C9orf106Q8NAJ2 232 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 OR52E5Q8NH55 327 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 OR51H1Q8NH63 302 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 MBD3L2Q8NHZ7 208 aaPredicted RBP4.2□□□□□ -1.74
SDC2-204ENST00000519914 SCGB1C1Q8TD33 95 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 CD300LFQ8TDQ1 290 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 CA5BP1Q8WTZ4 195 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 SARAFQ96BY9 339 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 GALMQ96C23 342 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 RAB39BQ96DA2 213 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 TVP23CQ96ET8 276 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 COQ2Q96H96 371 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 CIB3Q96Q77 187 aaPredicted RBP4.2□□□□□ -1.74
SDC2-204ENST00000519914 GPHA2Q96T91 129 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 HSD17B10Q99714 261 aaKnown RBP4.2□□□□□ -1.74
SDC2-204ENST00000519914 RARRES2Q99969 163 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 TMEM208Q9BTX3 173 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 PARP12Q9H0J9 701 aaKnown RBP4.2□□□□□ -1.74
SDC2-204ENST00000519914 ZNF71Q9NQZ8 489 aaPredicted RBP4.2□□□□□ -1.74
SDC2-204ENST00000519914 RPRMQ9NS64 109 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 DKK4Q9UBT3 224 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 OR14J1Q9UGF5 321 aa4.2□□□□□ -1.74
SDC2-204ENST00000519914 FAM186AA6NE01 2351 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 TANC2Q9HCD6 1990 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 NCOR1O75376 2440 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 IGHV1-18A0A0C4DH31 117 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 A0A1W2PPE2 198 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 A6NLC8 198 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 TMEM250H0YL14 139 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 H0YL77 283 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 M0R036 132 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 F2RL2O00254 374 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 ZNHIT1O43257 154 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 YPEL1O60688 119 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 WDR1O75083 606 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 ZNF737O75373 536 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 TNFSF13O75888 250 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 LYZL6O75951 148 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 IFNA1P01562 189 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 CECR9P0C854 216 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 OR13C7P0DN81 318 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 CGB3P0DN86 165 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 CGB7P0DN87 165 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 CCKARP32238 428 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 ASCL1P50553 236 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 ERVFC1-1P60608 527 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 ERVS71-1P61550 626 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 RPL30P62888 115 aaKnown RBP4.19□□□□□ -1.74
SDC2-204ENST00000519914 NKX6-1P78426 367 aaPredicted RBP4.19□□□□□ -1.74
SDC2-204ENST00000519914 SLC38A11Q08AI6 406 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 TMEM267Q0VDI3 215 aaPredicted RBP4.19□□□□□ -1.74
SDC2-204ENST00000519914 FOXE3Q13461 319 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 JOSD1Q15040 202 aaPredicted RBP4.19□□□□□ -1.74
SDC2-204ENST00000519914 ELOBQ15370 118 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 TMEM30BQ3MIR4 351 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 ZNF718Q3SXZ3 478 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 KRTCAP3Q53RY4 240 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 ATP1A1-AS1Q5TC04 95 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 IGFL4Q6B9Z1 124 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 SSX7Q7RTT5 188 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 ZNF429Q86V71 674 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 THNSL2Q86YJ6 484 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 TMEM217Q8N7C4 229 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 CYB561D1Q8N8Q1 229 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 FDCSPQ8NFU4 85 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 OR1L1Q8NH94 360 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 TAF15Q92804 592 aaKnown RBP eCLIP4.19□□□□□ -1.74
SDC2-204ENST00000519914 RAB1CQ92928 201 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 SMIM12Q96EX1 92 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 FAM210BQ96KR6 192 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 SNX22Q96L94 193 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 YPEL2Q96QA6 119 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 OR4C12Q96R67 309 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 TRIB1Q96RU8 372 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 NIPSNAP3BQ9BS92 247 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 TMEM147Q9BVK8 224 aa4.19□□□□□ -1.74
SDC2-204ENST00000519914 CTDSP1Q9GZU7 261 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms