RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 TCF21O43680 179 aa11.32□□□□□ -0.6
SDC2-203ENST00000519587 CREBL2O60519 120 aaPredicted RBP11.32□□□□□ -0.6
SDC2-203ENST00000519587 RAMP3O60896 148 aa11.32□□□□□ -0.6
SDC2-203ENST00000519587 SFT2D2O95562 160 aa11.32□□□□□ -0.6
SDC2-203ENST00000519587 NQO2P16083 231 aa11.32□□□□□ -0.6
SDC2-203ENST00000519587 LPAR6P43657 344 aa11.32□□□□□ -0.6
SDC2-203ENST00000519587 DHRS2Q13268 280 aa11.32□□□□□ -0.6
SDC2-203ENST00000519587 HNF4GQ14541 408 aa11.32□□□□□ -0.6
SDC2-203ENST00000519587 SLC9A3R2Q15599 337 aa11.32□□□□□ -0.6
SDC2-203ENST00000519587 CCBE1Q6UXH8 406 aaPredicted RBP11.32□□□□□ -0.6
SDC2-203ENST00000519587 LYG2Q86SG7 212 aa11.32□□□□□ -0.6
SDC2-203ENST00000519587 Q8N6K4 173 aa11.32□□□□□ -0.6
SDC2-203ENST00000519587 COQ8AQ8NI60 647 aa11.32□□□□□ -0.6
SDC2-203ENST00000519587 RNASE11Q8TAA1 199 aaKnown RBP11.32□□□□□ -0.6
SDC2-203ENST00000519587 VSTM2AQ8TAG5 236 aa11.32□□□□□ -0.6
SDC2-203ENST00000519587 PIFOQ8TCI5 191 aa11.32□□□□□ -0.6
SDC2-203ENST00000519587 RBM14Q96PK6 669 aaKnown RBP11.32□□□□□ -0.6
SDC2-203ENST00000519587 C9orf170A2RU37 121 aa11.31□□□□□ -0.6
SDC2-203ENST00000519587 S1PR2O95136 353 aa11.31□□□□□ -0.6
SDC2-203ENST00000519587 DUS4LO95620 317 aaKnown RBP11.31□□□□□ -0.6
SDC2-203ENST00000519587 IL5P05113 134 aa11.31□□□□□ -0.6
SDC2-203ENST00000519587 AKR1C2P52895 323 aa11.31□□□□□ -0.6
SDC2-203ENST00000519587 SUPT4H1P63272 117 aaKnown RBP11.31□□□□□ -0.6
SDC2-203ENST00000519587 PLGLAQ15195 96 aa11.31□□□□□ -0.6
SDC2-203ENST00000519587 ZNF695Q8IW36 515 aa11.31□□□□□ -0.6
SDC2-203ENST00000519587 LGI3Q8N145 548 aa11.31□□□□□ -0.6
SDC2-203ENST00000519587 DMBX1Q8NFW5 382 aa11.31□□□□□ -0.6
SDC2-203ENST00000519587 CASTOR1Q8WTX7 329 aa11.31□□□□□ -0.6
SDC2-203ENST00000519587 CHPT1Q8WUD6 406 aa11.31□□□□□ -0.6
SDC2-203ENST00000519587 RBPMSQ93062 196 aaKnown RBP11.31□□□□□ -0.6
SDC2-203ENST00000519587 IL22RA2Q969J5 263 aa11.31□□□□□ -0.6
SDC2-203ENST00000519587 R3HDM4Q96D70 268 aa11.31□□□□□ -0.6
SDC2-203ENST00000519587 PHB2Q99623 299 aa11.31□□□□□ -0.6
SDC2-203ENST00000519587 BEX1Q9HBH7 125 aa11.31□□□□□ -0.6
SDC2-203ENST00000519587 TNFRSF19Q9NS68 423 aa11.31□□□□□ -0.6
SDC2-203ENST00000519587 DUXBA0A1W2PPF3 345 aa11.3□□□□□ -0.6
SDC2-203ENST00000519587 NCBP2LA6PVI3 153 aaKnown RBP11.3□□□□□ -0.6
SDC2-203ENST00000519587 FGF16O43320 207 aa11.3□□□□□ -0.6
SDC2-203ENST00000519587 VSIG10L2P0DP72 767 aa11.3□□□□□ -0.6
SDC2-203ENST00000519587 SPNP16150 400 aa11.3□□□□□ -0.6
SDC2-203ENST00000519587 BRWD1-AS2P59051 145 aa11.3□□□□□ -0.6
SDC2-203ENST00000519587 UBE2KP61086 200 aa11.3□□□□□ -0.6
SDC2-203ENST00000519587 RPL15P61313 204 aaKnown RBP11.3□□□□□ -0.6
SDC2-203ENST00000519587 TMEM187Q14656 261 aa11.3□□□□□ -0.6
SDC2-203ENST00000519587 OXA1LQ15070 435 aa11.3□□□□□ -0.6
SDC2-203ENST00000519587 POU2AF1Q16633 256 aa11.3□□□□□ -0.6
SDC2-203ENST00000519587 SP6Q3SY56 376 aa11.3□□□□□ -0.6
SDC2-203ENST00000519587 ZNF585BQ52M93 769 aa11.3□□□□□ -0.6
SDC2-203ENST00000519587 TMEM219Q86XT9 240 aa11.3□□□□□ -0.6
SDC2-203ENST00000519587 NPBQ8NG41 125 aa11.3□□□□□ -0.6
SDC2-203ENST00000519587 GLYATL2Q8WU03 294 aa11.3□□□□□ -0.6
SDC2-203ENST00000519587 RHOVQ96L33 236 aa11.3□□□□□ -0.6
SDC2-203ENST00000519587 TMEM56Q96MV1 263 aa11.3□□□□□ -0.6
SDC2-203ENST00000519587 CHIAQ9BZP6 476 aa11.3□□□□□ -0.6
SDC2-203ENST00000519587 NPFFR1Q9GZQ6 430 aa11.3□□□□□ -0.6
SDC2-203ENST00000519587 TMEM56-RWDD3S4R434 201 aa11.3□□□□□ -0.6
SDC2-203ENST00000519587 MARCH11A6NNE9 402 aa11.29□□□□□ -0.6
SDC2-203ENST00000519587 RRHO14718 337 aa11.29□□□□□ -0.6
SDC2-203ENST00000519587 SLC25A17O43808 307 aa11.29□□□□□ -0.6
SDC2-203ENST00000519587 GPR137BO60478 399 aa11.29□□□□□ -0.6
SDC2-203ENST00000519587 NDUFA3O95167 84 aa11.29□□□□□ -0.6
SDC2-203ENST00000519587 CDS2O95674 445 aa11.29□□□□□ -0.6
SDC2-203ENST00000519587 RNASE1P07998 156 aaKnown RBP11.29□□□□□ -0.6
SDC2-203ENST00000519587 SAA1P0DJI8 122 aaPredicted RBP11.29□□□□□ -0.6
SDC2-203ENST00000519587 PSG5Q15238 335 aa11.29□□□□□ -0.6
SDC2-203ENST00000519587 TMEM268Q5VZI3 342 aa11.29□□□□□ -0.6
SDC2-203ENST00000519587 TEX45Q8NA69 505 aa11.29□□□□□ -0.6
SDC2-203ENST00000519587 ZNF431Q8TF32 576 aaPredicted RBP11.29□□□□□ -0.6
SDC2-203ENST00000519587 RRNAD1Q96FB5 475 aaKnown RBP11.29□□□□□ -0.6
SDC2-203ENST00000519587 RASL11BQ9BPW5 248 aa11.29□□□□□ -0.6
SDC2-203ENST00000519587 METTL1Q9UBP6 276 aaKnown RBP11.29□□□□□ -0.6
SDC2-203ENST00000519587 A0A0B4J2A0 478 aa11.28□□□□□ -0.6
SDC2-203ENST00000519587 SNRPGP15A8MWD9 76 aa11.28□□□□□ -0.6
SDC2-203ENST00000519587 TRIM77I1YAP6 450 aa11.28□□□□□ -0.6
SDC2-203ENST00000519587 KRASP01116 189 aa11.28□□□□□ -0.6
SDC2-203ENST00000519587 CRYBA1P05813 215 aa11.28□□□□□ -0.6
SDC2-203ENST00000519587 UBA52P62987 128 aaKnown RBP11.28□□□□□ -0.6
SDC2-203ENST00000519587 C5orf64Q2M2E5 130 aa11.28□□□□□ -0.6
SDC2-203ENST00000519587 H2BFWTQ7Z2G1 175 aa11.28□□□□□ -0.6
SDC2-203ENST00000519587 FAM219AQ8IW50 185 aa11.28□□□□□ -0.6
SDC2-203ENST00000519587 CADM3Q8N126 398 aa11.28□□□□□ -0.6
SDC2-203ENST00000519587 LRTM2Q8N967 370 aa11.28□□□□□ -0.6
SDC2-203ENST00000519587 OR4A5Q8NH83 315 aa11.28□□□□□ -0.6
SDC2-203ENST00000519587 DUX5Q96PT3 197 aa11.28□□□□□ -0.6
SDC2-203ENST00000519587 SEC22CQ9BRL7 303 aa11.28□□□□□ -0.6
SDC2-203ENST00000519587 TMEM140Q9NV12 185 aa11.28□□□□□ -0.6
SDC2-203ENST00000519587 SHPKQ9UHJ6 478 aa11.28□□□□□ -0.6
SDC2-203ENST00000519587 CHST1O43916 411 aa11.27□□□□□ -0.61
SDC2-203ENST00000519587 ACTL6BO94805 426 aa11.27□□□□□ -0.61
SDC2-203ENST00000519587 KBTBD11O94819 623 aa11.27□□□□□ -0.61
SDC2-203ENST00000519587 OR2A4O95047 310 aa11.27□□□□□ -0.61
SDC2-203ENST00000519587 IGLV2-23P01705 113 aa11.27□□□□□ -0.61
SDC2-203ENST00000519587 CNTFRP26992 372 aa11.27□□□□□ -0.61
SDC2-203ENST00000519587 G6PCP35575 357 aa11.27□□□□□ -0.61
SDC2-203ENST00000519587 TATDN3Q17R31 274 aa11.27□□□□□ -0.61
SDC2-203ENST00000519587 ANKRD55Q3KP44 614 aa11.27□□□□□ -0.61
SDC2-203ENST00000519587 OR4A47Q6IF82 309 aa11.27□□□□□ -0.61
SDC2-203ENST00000519587 SSX9Q7RTT3 188 aa11.27□□□□□ -0.61
SDC2-203ENST00000519587 SELENOHQ8IZQ5 122 aaKnown RBP11.27□□□□□ -0.61
SDC2-203ENST00000519587 FAM71E2Q8N5Q1 922 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms