RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 WDR82Q6UXN9 313 aa11.36□□□□□ -0.59
PABPC1-208ENST00000519004 TMEM70Q9BUB7 260 aa11.36□□□□□ -0.59
PABPC1-208ENST00000519004 GTSF1LQ9H1H1 148 aa11.36□□□□□ -0.59
PABPC1-208ENST00000519004 OR2D2Q9H210 308 aa11.36□□□□□ -0.59
PABPC1-208ENST00000519004 ARL2-SNX15V9GYD0 113 aa11.36□□□□□ -0.59
PABPC1-208ENST00000519004 OR10J4P0C629 311 aa11.35□□□□□ -0.59
PABPC1-208ENST00000519004 SMAGPQ0VAQ4 97 aa11.35□□□□□ -0.59
PABPC1-208ENST00000519004 CT55Q8WUE5 264 aa11.35□□□□□ -0.59
PABPC1-208ENST00000519004 TMEM45BQ96B21 275 aa11.35□□□□□ -0.59
PABPC1-208ENST00000519004 C19orf25Q9UFG5 118 aaPredicted RBP11.35□□□□□ -0.59
PABPC1-208ENST00000519004 C2orf16Q68DN1 1984 aa11.35□□□□□ -0.59
PABPC1-208ENST00000519004 TRGV10A0A0A0MS01 117 aa11.35□□□□□ -0.59
PABPC1-208ENST00000519004 SMIM17P0DL12 118 aa11.35□□□□□ -0.59
PABPC1-208ENST00000519004 FAM120AOSQ5T036 256 aa11.35□□□□□ -0.59
PABPC1-208ENST00000519004 SPACA3Q8IXA5 215 aa11.35□□□□□ -0.59
PABPC1-208ENST00000519004 C11orf52Q96A22 123 aa11.35□□□□□ -0.59
PABPC1-208ENST00000519004 NABP1Q96AH0 204 aa11.35□□□□□ -0.59
PABPC1-208ENST00000519004 TNFRSF19Q9NS68 423 aa11.35□□□□□ -0.59
PABPC1-208ENST00000519004 C1RLQ9NZP8 487 aa11.35□□□□□ -0.59
PABPC1-208ENST00000519004 A0A1W2PPV4 95 aa11.34□□□□□ -0.59
PABPC1-208ENST00000519004 TRAPPC2LH3BP13 241 aa11.34□□□□□ -0.59
PABPC1-208ENST00000519004 CRXO43186 299 aaPredicted RBP11.34□□□□□ -0.59
PABPC1-208ENST00000519004 CXCL10P02778 98 aa11.34□□□□□ -0.59
PABPC1-208ENST00000519004 CD1BP29016 333 aa11.34□□□□□ -0.59
PABPC1-208ENST00000519004 RAB9AP51151 201 aa11.34□□□□□ -0.59
PABPC1-208ENST00000519004 FOXE3Q13461 319 aa11.34□□□□□ -0.59
PABPC1-208ENST00000519004 GABRA6Q16445 453 aa11.34□□□□□ -0.59
PABPC1-208ENST00000519004 SLC35E4Q6ICL7 350 aa11.34□□□□□ -0.59
PABPC1-208ENST00000519004 TMEM92Q6UXU6 159 aa11.34□□□□□ -0.59
PABPC1-208ENST00000519004 ZNF441Q8N8Z8 693 aa11.34□□□□□ -0.59
PABPC1-208ENST00000519004 ZNF48Q96MX3 618 aaPredicted RBP11.34□□□□□ -0.59
PABPC1-208ENST00000519004 NPFFR1Q9GZQ6 430 aa11.34□□□□□ -0.59
PABPC1-208ENST00000519004 LAMA2P24043 3122 aaKnown RBP11.34□□□□□ -0.59
PABPC1-208ENST00000519004 IGKV3D-11A0A0A0MRZ8 115 aa11.34□□□□□ -0.59
PABPC1-208ENST00000519004 TMEM150CB9EJG8 249 aa11.34□□□□□ -0.59
PABPC1-208ENST00000519004 TNFSF11O14788 317 aa11.34□□□□□ -0.59
PABPC1-208ENST00000519004 STAG3L2P0CL84 134 aa11.34□□□□□ -0.59
PABPC1-208ENST00000519004 STAG3L3P0CL85 134 aa11.34□□□□□ -0.59
PABPC1-208ENST00000519004 REG1BP48304 166 aa11.34□□□□□ -0.59
PABPC1-208ENST00000519004 FBXW4P57775 412 aa11.34□□□□□ -0.59
PABPC1-208ENST00000519004 FXYD3Q14802 87 aa11.34□□□□□ -0.59
PABPC1-208ENST00000519004 SIGMAR1Q99720 223 aa11.34□□□□□ -0.59
PABPC1-208ENST00000519004 RNASE7Q9H1E1 156 aaKnown RBP11.34□□□□□ -0.59
PABPC1-208ENST00000519004 PLEK2Q9NYT0 353 aa11.34□□□□□ -0.59
PABPC1-208ENST00000519004 PPP1R3CQ9UQK1 317 aa11.34□□□□□ -0.59
PABPC1-208ENST00000519004 TRAV26-1A0A087WT03 109 aa11.33□□□□□ -0.6
PABPC1-208ENST00000519004 A0A1W2PNR3 127 aa11.33□□□□□ -0.6
PABPC1-208ENST00000519004 HSPB6O14558 160 aa11.33□□□□□ -0.6
PABPC1-208ENST00000519004 SRFP11831 508 aa11.33□□□□□ -0.6
PABPC1-208ENST00000519004 CEACAM3P40198 252 aa11.33□□□□□ -0.6
PABPC1-208ENST00000519004 EDDM3BP56851 147 aa11.33□□□□□ -0.6
PABPC1-208ENST00000519004 KLF5Q13887 457 aaPredicted RBP11.33□□□□□ -0.6
PABPC1-208ENST00000519004 ZNF611Q8N823 705 aa11.33□□□□□ -0.6
PABPC1-208ENST00000519004 STXBP6Q8NFX7 210 aa11.33□□□□□ -0.6
PABPC1-208ENST00000519004 OR5A2Q8NGI9 324 aa11.33□□□□□ -0.6
PABPC1-208ENST00000519004 OR4A5Q8NH83 315 aa11.33□□□□□ -0.6
PABPC1-208ENST00000519004 SPTSSAQ969W0 71 aa11.33□□□□□ -0.6
PABPC1-208ENST00000519004 HS3ST6Q96QI5 342 aa11.33□□□□□ -0.6
PABPC1-208ENST00000519004 THYN1Q9P016 225 aa11.33□□□□□ -0.6
PABPC1-208ENST00000519004 COL5A1P20908 1838 aaPredicted RBP11.33□□□□□ -0.6
PABPC1-208ENST00000519004 C9orf118A6NHY6 69 aa11.33□□□□□ -0.6
PABPC1-208ENST00000519004 GPR183P32249 361 aa11.33□□□□□ -0.6
PABPC1-208ENST00000519004 MC5RP33032 325 aa11.33□□□□□ -0.6
PABPC1-208ENST00000519004 RNASEKQ6P5S7 137 aaKnown RBP11.33□□□□□ -0.6
PABPC1-208ENST00000519004 BHLHA15Q7RTS1 189 aaPredicted RBP11.33□□□□□ -0.6
PABPC1-208ENST00000519004 CLDN23Q96B33 292 aa11.33□□□□□ -0.6
PABPC1-208ENST00000519004 OXGR1Q96P68 337 aa11.33□□□□□ -0.6
PABPC1-208ENST00000519004 ZNF391Q9UJN7 358 aa11.33□□□□□ -0.6
PABPC1-208ENST00000519004 FAM90A10PA6NDY2 464 aa11.32□□□□□ -0.6
PABPC1-208ENST00000519004 FAM90A18PA6NE21 464 aa11.32□□□□□ -0.6
PABPC1-208ENST00000519004 FAM90A16PA6NEW6 464 aa11.32□□□□□ -0.6
PABPC1-208ENST00000519004 FAM90A20PA6NIJ5 464 aa11.32□□□□□ -0.6
PABPC1-208ENST00000519004 FAM90A8PA6NJQ4 464 aa11.32□□□□□ -0.6
PABPC1-208ENST00000519004 FAM90A7PA6NKC0 464 aa11.32□□□□□ -0.6
PABPC1-208ENST00000519004 FAM90A22PA8MWA6 464 aa11.32□□□□□ -0.6
PABPC1-208ENST00000519004 FAM90A12PA8MX19 464 aa11.32□□□□□ -0.6
PABPC1-208ENST00000519004 FAM90A5PA8MXJ8 464 aa11.32□□□□□ -0.6
PABPC1-208ENST00000519004 FAM90A23PA8MXZ1 464 aa11.32□□□□□ -0.6
PABPC1-208ENST00000519004 FAM90A15PP0C7V4 464 aa11.32□□□□□ -0.6
PABPC1-208ENST00000519004 FAM90A13PP0C7W8 464 aa11.32□□□□□ -0.6
PABPC1-208ENST00000519004 FAM90A14PP0C7W9 464 aa11.32□□□□□ -0.6
PABPC1-208ENST00000519004 FAM90A24PP0C7X0 464 aa11.32□□□□□ -0.6
PABPC1-208ENST00000519004 ZNF16P17020 682 aaPredicted RBP11.32□□□□□ -0.6
PABPC1-208ENST00000519004 USF1P22415 310 aaPredicted RBP11.32□□□□□ -0.6
PABPC1-208ENST00000519004 CRYGSP22914 178 aa11.32□□□□□ -0.6
PABPC1-208ENST00000519004 CRYBA4P53673 196 aa11.32□□□□□ -0.6
PABPC1-208ENST00000519004 RHBDD2Q6NTF9 364 aa11.32□□□□□ -0.6
PABPC1-208ENST00000519004 C20orf204Q6ZNR8 217 aa11.32□□□□□ -0.6
PABPC1-208ENST00000519004 C16orf47Q6ZP98 133 aaPredicted RBP11.32□□□□□ -0.6
PABPC1-208ENST00000519004 C2orf91Q6ZV80 131 aa11.32□□□□□ -0.6
PABPC1-208ENST00000519004 FGFRL1Q8N441 504 aa11.32□□□□□ -0.6
PABPC1-208ENST00000519004 SLC37A2Q8TED4 501 aa11.32□□□□□ -0.6
PABPC1-208ENST00000519004 RLN3Q8WXF3 142 aa11.32□□□□□ -0.6
PABPC1-208ENST00000519004 SMIM27A0A1W2PRY6 76 aa11.31□□□□□ -0.6
PABPC1-208ENST00000519004 AGFG2O95081 481 aa11.31□□□□□ -0.6
PABPC1-208ENST00000519004 CXorf1O96002 111 aa11.31□□□□□ -0.6
PABPC1-208ENST00000519004 PLP1P60201 277 aa11.31□□□□□ -0.6
PABPC1-208ENST00000519004 SEC11AP67812 179 aa11.31□□□□□ -0.6
PABPC1-208ENST00000519004 DOLPP1Q86YN1 238 aa11.31□□□□□ -0.6
PABPC1-208ENST00000519004 URB1-AS1Q96HZ7 61 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms