RNA–Protein interactions for RNA: ENST00000517730.5

PCM1-204, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-204ENST00000517730 SFXN3Q9BWM7 321 aa12.71□□□□□ -0.37
PCM1-204ENST00000517730 FOXJ2Q9P0K8 574 aa12.71□□□□□ -0.37
PCM1-204ENST00000517730 ZNF253O75346 499 aa12.71□□□□□ -0.37
PCM1-204ENST00000517730 KLF7O75840 302 aaPredicted RBP12.71□□□□□ -0.37
PCM1-204ENST00000517730 HNF1AP20823 631 aa12.71□□□□□ -0.37
PCM1-204ENST00000517730 CA6P23280 308 aa12.71□□□□□ -0.37
PCM1-204ENST00000517730 ERVK11-1P61568 191 aa12.71□□□□□ -0.37
PCM1-204ENST00000517730 PDLIM3Q53GG5 364 aaPredicted RBP12.71□□□□□ -0.37
PCM1-204ENST00000517730 MMD2Q8IY49 270 aa12.71□□□□□ -0.37
PCM1-204ENST00000517730 ZNF808Q8N4W9 903 aaPredicted RBP12.71□□□□□ -0.37
PCM1-204ENST00000517730 KLHDC1Q8N7A1 406 aa12.71□□□□□ -0.37
PCM1-204ENST00000517730 STARD4Q96DR4 205 aa12.71□□□□□ -0.37
PCM1-204ENST00000517730 GNB4Q9HAV0 340 aa12.71□□□□□ -0.37
PCM1-204ENST00000517730 TBL2Q9Y4P3 447 aaKnown RBP12.71□□□□□ -0.37
PCM1-204ENST00000517730 SDK1Q7Z5N4 2213 aa12.71□□□□□ -0.38
PCM1-204ENST00000517730 FRYLO94915 3013 aa12.71□□□□□ -0.38
PCM1-204ENST00000517730 ZNF407Q9C0G0 2248 aa12.71□□□□□ -0.38
PCM1-204ENST00000517730 TRGV10A0A0A0MS01 117 aa12.7□□□□□ -0.38
PCM1-204ENST00000517730 TMEM30CPA0ZSE6 113 aa12.7□□□□□ -0.38
PCM1-204ENST00000517730 ZNF503-AS2A6NEH8 195 aa12.7□□□□□ -0.38
PCM1-204ENST00000517730 C3orf80F5H4A9 247 aa12.7□□□□□ -0.38
PCM1-204ENST00000517730 SLC17A3O00476 420 aa12.7□□□□□ -0.38
PCM1-204ENST00000517730 MT-CO2P00403 227 aa12.7□□□□□ -0.38
PCM1-204ENST00000517730 HTD2P86397 168 aa12.7□□□□□ -0.38
PCM1-204ENST00000517730 ZNF146Q15072 292 aa12.7□□□□□ -0.38
PCM1-204ENST00000517730 RAB30Q15771 203 aa12.7□□□□□ -0.38
PCM1-204ENST00000517730 IGFBP7Q16270 282 aa12.7□□□□□ -0.38
PCM1-204ENST00000517730 MCEMP1Q8IX19 187 aa12.7□□□□□ -0.38
PCM1-204ENST00000517730 C5orf30Q96GV9 206 aa12.7□□□□□ -0.38
PCM1-204ENST00000517730 KCNS1Q96KK3 526 aa12.7□□□□□ -0.38
PCM1-204ENST00000517730 UHRF2Q96PU4 802 aa12.7□□□□□ -0.38
PCM1-204ENST00000517730 NRN1Q9NPD7 142 aa12.7□□□□□ -0.38
PCM1-204ENST00000517730 LAMTOR2Q9Y2Q5 125 aa12.7□□□□□ -0.38
PCM1-204ENST00000517730 DIDO1Q9BTC0 2240 aaKnown RBP12.7□□□□□ -0.38
PCM1-204ENST00000517730 FAM166BA8MTA8 275 aa12.7□□□□□ -0.38
PCM1-204ENST00000517730 F2Z2F3 143 aa12.7□□□□□ -0.38
PCM1-204ENST00000517730 K7EN84 100 aa12.7□□□□□ -0.38
PCM1-204ENST00000517730 OR5G3P0C626 314 aa12.7□□□□□ -0.38
PCM1-204ENST00000517730 IGLC2P0DOY2 106 aa12.7□□□□□ -0.38
PCM1-204ENST00000517730 IGLC3P0DOY3 106 aa12.7□□□□□ -0.38
PCM1-204ENST00000517730 HNRNPA3P51991 378 aaKnown RBP12.7□□□□□ -0.38
PCM1-204ENST00000517730 BRWD1-AS2P59051 145 aa12.7□□□□□ -0.38
PCM1-204ENST00000517730 RPL31P62899 125 aaKnown RBP12.7□□□□□ -0.38
PCM1-204ENST00000517730 TXN2Q99757 166 aa12.7□□□□□ -0.38
PCM1-204ENST00000517730 FAM103A1Q9BTL3 118 aaKnown RBP12.7□□□□□ -0.38
PCM1-204ENST00000517730 GAL3ST2Q9H3Q3 398 aa12.7□□□□□ -0.38
PCM1-204ENST00000517730 CDIPTO14735 213 aa12.69□□□□□ -0.38
PCM1-204ENST00000517730 GFRA1P56159 465 aa12.69□□□□□ -0.38
PCM1-204ENST00000517730 PSG7Q13046 419 aa12.69□□□□□ -0.38
PCM1-204ENST00000517730 SPATA46Q5T0L3 261 aa12.69□□□□□ -0.38
PCM1-204ENST00000517730 OR2Y1Q8NGV0 311 aa12.69□□□□□ -0.38
PCM1-204ENST00000517730 NINJ1Q92982 152 aa12.69□□□□□ -0.38
PCM1-204ENST00000517730 EAF1Q96JC9 268 aaPredicted RBP12.69□□□□□ -0.38
PCM1-204ENST00000517730 YTHDF2Q9Y5A9 579 aaKnown RBP12.69□□□□□ -0.38
PCM1-204ENST00000517730 HYPMO75409 117 aa12.69□□□□□ -0.38
PCM1-204ENST00000517730 SRFP11831 508 aa12.69□□□□□ -0.38
PCM1-204ENST00000517730 SPINK2P20155 84 aa12.69□□□□□ -0.38
PCM1-204ENST00000517730 GDF1P27539 372 aa12.69□□□□□ -0.38
PCM1-204ENST00000517730 AMTP48728 403 aa12.69□□□□□ -0.38
PCM1-204ENST00000517730 GNG10P50151 68 aa12.69□□□□□ -0.38
PCM1-204ENST00000517730 KLF3P57682 345 aaPredicted RBP12.69□□□□□ -0.38
PCM1-204ENST00000517730 TMPRSS3P57727 454 aa12.69□□□□□ -0.38
PCM1-204ENST00000517730 TRA2AQ13595 282 aaKnown RBP eCLIP12.69□□□□□ -0.383e-10■■■■■ 29.8
PCM1-204ENST00000517730 AARDQ4LEZ3 155 aa12.69□□□□□ -0.38
PCM1-204ENST00000517730 SPINK9Q5DT21 86 aa12.69□□□□□ -0.38
PCM1-204ENST00000517730 LEMD1Q68G75 181 aa12.69□□□□□ -0.38
PCM1-204ENST00000517730 TREML4Q6UXN2 200 aa12.69□□□□□ -0.38
PCM1-204ENST00000517730 Q6ZN92 141 aa12.69□□□□□ -0.38
PCM1-204ENST00000517730 STPG4Q8N801 248 aa12.69□□□□□ -0.38
PCM1-204ENST00000517730 OR2M7Q8NG81 312 aa12.69□□□□□ -0.38
PCM1-204ENST00000517730 DOCK11Q5JSL3 2073 aa12.69□□□□□ -0.38
PCM1-204ENST00000517730 LY6G6EA0A0G2JKS1 128 aa12.68□□□□□ -0.38
PCM1-204ENST00000517730 OOEPA6NGQ2 149 aa12.68□□□□□ -0.38
PCM1-204ENST00000517730 NXPH2O95156 264 aa12.68□□□□□ -0.38
PCM1-204ENST00000517730 NDUFB8O95169 186 aa12.68□□□□□ -0.38
PCM1-204ENST00000517730 OR10J4P0C629 311 aa12.68□□□□□ -0.38
PCM1-204ENST00000517730 GCHFRP30047 84 aa12.68□□□□□ -0.38
PCM1-204ENST00000517730 SCCPDHQ8NBX0 429 aa12.68□□□□□ -0.38
PCM1-204ENST00000517730 HSD17B10Q99714 261 aaKnown RBP12.68□□□□□ -0.38
PCM1-204ENST00000517730 NAT8BQ9UHF3 227 aa12.68□□□□□ -0.38
PCM1-204ENST00000517730 RNF114Q9Y508 228 aa12.68□□□□□ -0.38
PCM1-204ENST00000517730 U3KQA8 63 aa12.68□□□□□ -0.38
PCM1-204ENST00000517730 V9GYV3 84 aa12.68□□□□□ -0.38
PCM1-204ENST00000517730 FRYQ5TBA9 3013 aa12.68□□□□□ -0.38
PCM1-204ENST00000517730 FAM90A9PA6NNJ1 464 aa12.68□□□□□ -0.38
PCM1-204ENST00000517730 PTTG1IPP53801 180 aa12.68□□□□□ -0.38
PCM1-204ENST00000517730 MGST2Q99735 147 aa12.68□□□□□ -0.38
PCM1-204ENST00000517730 GGTLC1Q9BX51 225 aa12.68□□□□□ -0.38
PCM1-204ENST00000517730 C12orf77C9JDV5 145 aa12.67□□□□□ -0.38
PCM1-204ENST00000517730 AREGP15514 252 aa12.67□□□□□ -0.38
PCM1-204ENST00000517730 PRRX1P54821 245 aa12.67□□□□□ -0.38
PCM1-204ENST00000517730 CX3CL1P78423 397 aa12.67□□□□□ -0.38
PCM1-204ENST00000517730 C19orf35Q6ZS72 473 aa12.67□□□□□ -0.38
PCM1-204ENST00000517730 OR52L2PQ8NGH6 319 aa12.67□□□□□ -0.38
PCM1-204ENST00000517730 VPS13AQ96RL7 3174 aa12.67□□□□□ -0.38
PCM1-204ENST00000517730 RRHO14718 337 aa12.67□□□□□ -0.38
PCM1-204ENST00000517730 IGHEP01854 428 aa12.67□□□□□ -0.38
PCM1-204ENST00000517730 FOXG1P55316 489 aaPredicted RBP12.67□□□□□ -0.38
PCM1-204ENST00000517730 SAPCD1Q5SSQ6 148 aa12.67□□□□□ -0.38
PCM1-204ENST00000517730 SLC35E4Q6ICL7 350 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms