RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 WNT5AP41221 380 aa9.22□□□□□ -0.93
PCDHGA1-202ENST00000517417 GFI1BQ5VTD9 330 aa9.22□□□□□ -0.93
PCDHGA1-202ENST00000517417 OR1L8Q8NGR8 309 aa9.22□□□□□ -0.93
PCDHGA1-202ENST00000517417 PNRC2Q9NPJ4 139 aaKnown RBP9.22□□□□□ -0.93
PCDHGA1-202ENST00000517417 ATXN7O15265 892 aaPredicted RBP9.22□□□□□ -0.93
PCDHGA1-202ENST00000517417 TEPPQ6URK8 271 aa9.22□□□□□ -0.93
PCDHGA1-202ENST00000517417 C1QL4Q86Z23 238 aa9.22□□□□□ -0.93
PCDHGA1-202ENST00000517417 OR1P1Q8NH06 330 aa9.22□□□□□ -0.93
PCDHGA1-202ENST00000517417 C2orf16Q68DN1 1984 aa9.22□□□□□ -0.93
PCDHGA1-202ENST00000517417 RPL29P47914 159 aaKnown RBP9.22□□□□□ -0.93
PCDHGA1-202ENST00000517417 TPPP2P59282 170 aa9.22□□□□□ -0.93
PCDHGA1-202ENST00000517417 CFHR1Q03591 330 aa9.22□□□□□ -0.93
PCDHGA1-202ENST00000517417 OR8I2Q8N0Y5 310 aa9.22□□□□□ -0.93
PCDHGA1-202ENST00000517417 OR10G8Q8NGN5 311 aa9.22□□□□□ -0.93
PCDHGA1-202ENST00000517417 IMMP1LQ96LU5 166 aa9.22□□□□□ -0.93
PCDHGA1-202ENST00000517417 RPRMQ9NS64 109 aa9.22□□□□□ -0.93
PCDHGA1-202ENST00000517417 HILPDAQ9Y5L2 63 aa9.22□□□□□ -0.93
PCDHGA1-202ENST00000517417 SPG11Q96JI7 2443 aa9.21□□□□□ -0.93
PCDHGA1-202ENST00000517417 SPEGQ15772 3267 aa9.21□□□□□ -0.93
PCDHGA1-202ENST00000517417 CSN3P07498 182 aa9.21□□□□□ -0.93
PCDHGA1-202ENST00000517417 CD1BP29016 333 aa9.21□□□□□ -0.93
PCDHGA1-202ENST00000517417 KRTCAP3Q53RY4 240 aa9.21□□□□□ -0.93
PCDHGA1-202ENST00000517417 NFAM1Q8NET5 270 aaPredicted RBP9.21□□□□□ -0.93
PCDHGA1-202ENST00000517417 OR4D5Q8NGN0 318 aa9.21□□□□□ -0.93
PCDHGA1-202ENST00000517417 IL22RA2Q969J5 263 aa9.21□□□□□ -0.93
PCDHGA1-202ENST00000517417 CYYR1Q96J86 154 aa9.21□□□□□ -0.93
PCDHGA1-202ENST00000517417 MS4A10Q96PG2 267 aa9.21□□□□□ -0.93
PCDHGA1-202ENST00000517417 PRDM14Q9GZV8 571 aa9.21□□□□□ -0.93
PCDHGA1-202ENST00000517417 ZNF581Q9P0T4 197 aa9.21□□□□□ -0.93
PCDHGA1-202ENST00000517417 NAGKQ9UJ70 344 aa9.21□□□□□ -0.93
PCDHGA1-202ENST00000517417 ZNF407Q9C0G0 2248 aa9.21□□□□□ -0.93
PCDHGA1-202ENST00000517417 ODAMA1E959 279 aa9.21□□□□□ -0.94
PCDHGA1-202ENST00000517417 F2RL2O00254 374 aa9.21□□□□□ -0.94
PCDHGA1-202ENST00000517417 BRS3P32247 399 aa9.21□□□□□ -0.94
PCDHGA1-202ENST00000517417 SLC25A53Q5H9E4 307 aa9.21□□□□□ -0.94
PCDHGA1-202ENST00000517417 FA2HQ7L5A8 372 aa9.21□□□□□ -0.94
PCDHGA1-202ENST00000517417 SLC24A4Q8NFF2 622 aa9.21□□□□□ -0.94
PCDHGA1-202ENST00000517417 WDR61Q9GZS3 305 aaKnown RBP9.21□□□□□ -0.94
PCDHGA1-202ENST00000517417 TMEM167BQ9NRX6 74 aa9.21□□□□□ -0.94
PCDHGA1-202ENST00000517417 PHF3Q92576 2039 aaKnown RBP9.21□□□□□ -0.94
PCDHGA1-202ENST00000517417 KIAA2026Q5HYC2 2103 aa9.21□□□□□ -0.94
PCDHGA1-202ENST00000517417 UMODP07911 640 aa9.21□□□□□ -0.94
PCDHGA1-202ENST00000517417 HIST1H1BP16401 226 aaKnown RBP9.21□□□□□ -0.94
PCDHGA1-202ENST00000517417 LGALS7P47929 136 aa9.21□□□□□ -0.94
PCDHGA1-202ENST00000517417 MRPL14Q6P1L8 145 aaKnown RBP9.21□□□□□ -0.94
PCDHGA1-202ENST00000517417 LRTM2Q8N967 370 aa9.21□□□□□ -0.94
PCDHGA1-202ENST00000517417 ASCL3Q9NQ33 180 aa9.21□□□□□ -0.94
PCDHGA1-202ENST00000517417 OR51B2Q9Y5P1 312 aa9.21□□□□□ -0.94
PCDHGA1-202ENST00000517417 E9PLN8 166 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 J3KRW8 73 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 WNT9BO14905 357 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 SERF2P84101 59 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 MRPL54Q6P161 138 aaKnown RBP9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 FAM222BQ8WU58 562 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 ANAPC16Q96DE5 110 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 RBKSQ9H477 322 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 ZNF703Q9H7S9 590 aaPredicted RBP9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 C19orf67A6NJJ6 358 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 HPRT1P00492 218 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 HTR1DP28221 377 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 RANP62826 216 aaKnown RBP9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 HCP5Q6MZN7 132 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 CALHM1Q8IU99 346 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 RASL11BQ9BPW5 248 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 MANBALQ9NQG1 85 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 FAM208BQ5VWN6 2430 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 CTXND1A0A1B0GTU2 59 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 SFTPCP11686 197 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 CTSSP25774 331 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 CCKARP32238 428 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 PCP4P48539 62 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 ERVFRD-1P60508 538 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 MEF2BQ02080 365 aaPredicted RBP9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 ZNRF1Q8ND25 227 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 ZNF714Q96N38 554 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 PARD6AQ9NPB6 346 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 FOXD3Q9UJU5 478 aaPredicted RBP9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 M0R143 59 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 PLAUP00749 431 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 ACP1P24666 158 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 AMTP48728 403 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 PRSS3P2Q8NHM4 247 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 TICRRQ7Z2Z1 1910 aa9.2□□□□□ -0.94
PCDHGA1-202ENST00000517417 DENND4AQ7Z401 1863 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 TRAV34A0A0B4J273 112 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 HELTA6NFD8 242 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 SYNGR3O43761 229 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 ZNF253O75346 499 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 IGHV2-5P01817 119 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 SOD3P08294 240 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 FAM3BP58499 235 aaPredicted RBP9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 IL15RAQ13261 267 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 VWA1Q6PCB0 445 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 VKORC1L1Q8N0U8 176 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 FAM216AQ8WUB2 273 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 P2RX4Q99571 388 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 PROB1E7EW31 1015 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 RHBDL1O75783 438 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 IGHV2-70P01814 119 aa9.19□□□□□ -0.94
PCDHGA1-202ENST00000517417 SMIM17P0DL12 118 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 266.5 ms