RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 SPENQ96T58 3664 aaKnown RBP7.72□□□□□ -1.17
TPM3-222ENST00000515609 H0YJW9 148 aa7.72□□□□□ -1.17
TPM3-222ENST00000515609 J3QLI3 93 aa7.72□□□□□ -1.17
TPM3-222ENST00000515609 SSSCA1O60232 199 aa7.72□□□□□ -1.17
TPM3-222ENST00000515609 DFFBO76075 338 aa7.72□□□□□ -1.17
TPM3-222ENST00000515609 IGKV1-39P01597 117 aa7.72□□□□□ -1.17
TPM3-222ENST00000515609 IGKV1D-39P04432 117 aa7.72□□□□□ -1.17
TPM3-222ENST00000515609 MSMBP08118 114 aa7.72□□□□□ -1.17
TPM3-222ENST00000515609 TPT1P13693 172 aaKnown RBP7.72□□□□□ -1.17
TPM3-222ENST00000515609 COX7A1P24310 79 aa7.72□□□□□ -1.17
TPM3-222ENST00000515609 CD1BP29016 333 aa7.72□□□□□ -1.17
TPM3-222ENST00000515609 BRS3P32247 399 aa7.72□□□□□ -1.17
TPM3-222ENST00000515609 BPIFB3P59826 476 aa7.72□□□□□ -1.17
TPM3-222ENST00000515609 UBE2KP61086 200 aa7.72□□□□□ -1.17
TPM3-222ENST00000515609 RPS16P62249 146 aaKnown RBP7.72□□□□□ -1.17
TPM3-222ENST00000515609 AARDQ4LEZ3 155 aa7.72□□□□□ -1.17
TPM3-222ENST00000515609 VMO1Q7Z5L0 202 aa7.72□□□□□ -1.17
TPM3-222ENST00000515609 OR8H1Q8NGG4 311 aa7.72□□□□□ -1.17
TPM3-222ENST00000515609 OR5B3Q8NH48 314 aa7.72□□□□□ -1.17
TPM3-222ENST00000515609 LRRC20Q8TCA0 184 aa7.72□□□□□ -1.17
TPM3-222ENST00000515609 MALSU1Q96EH3 234 aa7.72□□□□□ -1.17
TPM3-222ENST00000515609 C5orf30Q96GV9 206 aa7.72□□□□□ -1.17
TPM3-222ENST00000515609 HARBI1Q96MB7 349 aa7.72□□□□□ -1.17
TPM3-222ENST00000515609 NABP2Q9BQ15 211 aa7.72□□□□□ -1.17
TPM3-222ENST00000515609 MRPL20Q9BYC9 149 aaKnown RBP7.72□□□□□ -1.17
TPM3-222ENST00000515609 MS4A7Q9GZW8 240 aaPredicted RBP7.72□□□□□ -1.17
TPM3-222ENST00000515609 LYRM2Q9NU23 88 aaPredicted RBP7.72□□□□□ -1.17
TPM3-222ENST00000515609 TMEM140Q9NV12 185 aa7.72□□□□□ -1.17
TPM3-222ENST00000515609 BET1LQ9NYM9 111 aa7.72□□□□□ -1.17
TPM3-222ENST00000515609 UBR5O95071 2799 aaPredicted RBP7.72□□□□□ -1.17
TPM3-222ENST00000515609 KMT2BQ9UMN6 2715 aaPredicted RBP7.71□□□□□ -1.18
TPM3-222ENST00000515609 IGHV1-3A0A0C4DH29 117 aa7.71□□□□□ -1.18
TPM3-222ENST00000515609 RNF222A6NCQ9 220 aa7.71□□□□□ -1.18
TPM3-222ENST00000515609 CEBPZOSA8MTT3 80 aa7.71□□□□□ -1.18
TPM3-222ENST00000515609 CHST1O43916 411 aa7.71□□□□□ -1.18
TPM3-222ENST00000515609 ACTL6BO94805 426 aa7.71□□□□□ -1.18
TPM3-222ENST00000515609 SPDEFO95238 335 aa7.71□□□□□ -1.18
TPM3-222ENST00000515609 P0C879 139 aa7.71□□□□□ -1.18
TPM3-222ENST00000515609 CXCL2P19875 107 aa7.71□□□□□ -1.18
TPM3-222ENST00000515609 MAS1LP35410 378 aa7.71□□□□□ -1.18
TPM3-222ENST00000515609 F2RL1P55085 397 aa7.71□□□□□ -1.18
TPM3-222ENST00000515609 POLR2GP62487 172 aaKnown RBP eCLIP7.71□□□□□ -1.18
TPM3-222ENST00000515609 PAX2Q02962 417 aa7.71□□□□□ -1.18
TPM3-222ENST00000515609 PDLIM3Q53GG5 364 aaPredicted RBP7.71□□□□□ -1.18
TPM3-222ENST00000515609 CXorf66Q5JRM2 361 aaPredicted RBP7.71□□□□□ -1.18
TPM3-222ENST00000515609 TPTE2P1Q5T6R2 138 aa7.71□□□□□ -1.18
TPM3-222ENST00000515609 OR4A47Q6IF82 309 aa7.71□□□□□ -1.18
TPM3-222ENST00000515609 FAM53AQ6NSI3 398 aaPredicted RBP7.71□□□□□ -1.18
TPM3-222ENST00000515609 TEX261Q6UWH6 196 aa7.71□□□□□ -1.18
TPM3-222ENST00000515609 MOB3BQ86TA1 216 aa7.71□□□□□ -1.18
TPM3-222ENST00000515609 Q8N7P7 452 aa7.71□□□□□ -1.18
TPM3-222ENST00000515609 TEX45Q8NA69 505 aa7.71□□□□□ -1.18
TPM3-222ENST00000515609 OR4P4Q8NGL7 312 aa7.71□□□□□ -1.18
TPM3-222ENST00000515609 PINX1Q96BK5 328 aaKnown RBP7.71□□□□□ -1.18
TPM3-222ENST00000515609 ZNF471Q9BX82 626 aaPredicted RBP7.71□□□□□ -1.18
TPM3-222ENST00000515609 COMMD5Q9GZQ3 224 aa7.71□□□□□ -1.18
TPM3-222ENST00000515609 SIRPDQ9H106 197 aa7.71□□□□□ -1.18
TPM3-222ENST00000515609 SIRT7Q9NRC8 400 aa7.71□□□□□ -1.18
TPM3-222ENST00000515609 OR5AC2Q9NZP5 309 aa7.71□□□□□ -1.18
TPM3-222ENST00000515609 UBQLN2Q9UHD9 624 aa7.71□□□□□ -1.18
TPM3-222ENST00000515609 FOXA2Q9Y261 457 aaPredicted RBP7.71□□□□□ -1.18
TPM3-222ENST00000515609 RCL1Q9Y2P8 373 aaKnown RBP7.71□□□□□ -1.18
TPM3-222ENST00000515609 U3KQ87 197 aa7.71□□□□□ -1.18
TPM3-222ENST00000515609 YLPM1P49750 1951 aaKnown RBP7.71□□□□□ -1.18
TPM3-222ENST00000515609 DOCK11Q5JSL3 2073 aa7.71□□□□□ -1.18
TPM3-222ENST00000515609 C15orf61A6NNL5 157 aa7.7□□□□□ -1.18
TPM3-222ENST00000515609 ODF3BA8MYP8 253 aa7.7□□□□□ -1.18
TPM3-222ENST00000515609 H0YIZ8 118 aa7.7□□□□□ -1.18
TPM3-222ENST00000515609 LY6LH3BQJ8 138 aa7.7□□□□□ -1.18
TPM3-222ENST00000515609 HKR1P10072 659 aa7.7□□□□□ -1.18
TPM3-222ENST00000515609 ZFP36P26651 326 aaKnown RBP7.7□□□□□ -1.18
TPM3-222ENST00000515609 SULT1A1P50225 295 aa7.7□□□□□ -1.18
TPM3-222ENST00000515609 BRWD1-AS2P59051 145 aa7.7□□□□□ -1.18
TPM3-222ENST00000515609 HSPE1P61604 102 aaKnown RBP7.7□□□□□ -1.18
TPM3-222ENST00000515609 RAB11AP62491 216 aa7.7□□□□□ -1.18
TPM3-222ENST00000515609 RPL8P62917 257 aaKnown RBP7.7□□□□□ -1.18
TPM3-222ENST00000515609 PAX8Q06710 450 aa7.7□□□□□ -1.18
TPM3-222ENST00000515609 LOXL1Q08397 574 aaPredicted RBP7.7□□□□□ -1.18
TPM3-222ENST00000515609 ATP6V1FQ16864 119 aa7.7□□□□□ -1.18
TPM3-222ENST00000515609 HSD17B13Q7Z5P4 300 aaPredicted RBP7.7□□□□□ -1.18
TPM3-222ENST00000515609 MMD2Q8IY49 270 aa7.7□□□□□ -1.18
TPM3-222ENST00000515609 LINC01356Q8N9X3 169 aa7.7□□□□□ -1.18
TPM3-222ENST00000515609 OR1S2Q8NGQ3 325 aa7.7□□□□□ -1.18
TPM3-222ENST00000515609 STOML3Q8TAV4 291 aa7.7□□□□□ -1.18
TPM3-222ENST00000515609 DTD1Q8TEA8 209 aa7.7□□□□□ -1.18
TPM3-222ENST00000515609 C1orf159Q96HA4 380 aa7.7□□□□□ -1.18
TPM3-222ENST00000515609 PSENENQ9NZ42 101 aa7.7□□□□□ -1.18
TPM3-222ENST00000515609 C1RLQ9NZP8 487 aa7.7□□□□□ -1.18
TPM3-222ENST00000515609 KIAA1456Q9P272 454 aa7.7□□□□□ -1.18
TPM3-222ENST00000515609 STRAPQ9Y3F4 350 aaKnown RBP7.7□□□□□ -1.18
TPM3-222ENST00000515609 MALRD1Q5VYJ5 2156 aa7.7□□□□□ -1.18
TPM3-222ENST00000515609 IGHV4-30-2A0A087WSY4 118 aa7.69□□□□□ -1.18
TPM3-222ENST00000515609 IGHV4-61A0A0C4DH41 118 aa7.69□□□□□ -1.18
TPM3-222ENST00000515609 A0A0G2JRQ6 117 aa7.69□□□□□ -1.18
TPM3-222ENST00000515609 A0A1W2PN81 502 aa7.69□□□□□ -1.18
TPM3-222ENST00000515609 UPK2O00526 184 aa7.69□□□□□ -1.18
TPM3-222ENST00000515609 KBTBD11O94819 623 aa7.69□□□□□ -1.18
TPM3-222ENST00000515609 IFNA5P01569 189 aa7.69□□□□□ -1.18
TPM3-222ENST00000515609 FAM106CPP0CH98 169 aa7.69□□□□□ -1.18
TPM3-222ENST00000515609 CHRNA7P36544 502 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms