RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 SAA1P0DJI8 122 aaPredicted RBP9.94□□□□□ -0.82
CLCN3-210ENST00000515420 RPL5P46777 297 aaKnown RBP9.94□□□□□ -0.82
CLCN3-210ENST00000515420 TMBIM6P55061 237 aa9.94□□□□□ -0.82
CLCN3-210ENST00000515420 RPL30P62888 115 aaKnown RBP9.94□□□□□ -0.82
CLCN3-210ENST00000515420 PJVKQ0ZLH3 352 aa9.94□□□□□ -0.82
CLCN3-210ENST00000515420 CATR1Q13166 79 aa9.94□□□□□ -0.82
CLCN3-210ENST00000515420 PRSS8Q16651 343 aa9.94□□□□□ -0.82
CLCN3-210ENST00000515420 MRGPRG-AS1Q2M3A8 158 aa9.94□□□□□ -0.82
CLCN3-210ENST00000515420 OR5H2Q8NGV7 314 aa9.94□□□□□ -0.82
CLCN3-210ENST00000515420 GRPEL2Q8TAA5 225 aa9.94□□□□□ -0.82
CLCN3-210ENST00000515420 C15orf40Q8WUR7 153 aa9.94□□□□□ -0.82
CLCN3-210ENST00000515420 AIFM2Q9BRQ8 373 aa9.94□□□□□ -0.82
CLCN3-210ENST00000515420 FAM103A1Q9BTL3 118 aaKnown RBP9.94□□□□□ -0.82
CLCN3-210ENST00000515420 SLC5A7Q9GZV3 580 aa9.94□□□□□ -0.82
CLCN3-210ENST00000515420 A3GALT2U3KPV4 340 aa9.94□□□□□ -0.82
CLCN3-210ENST00000515420 OR8U8P0C7N1 319 aa9.93□□□□□ -0.82
CLCN3-210ENST00000515420 RCVRNP35243 200 aa9.93□□□□□ -0.82
CLCN3-210ENST00000515420 HERV-K104P61576 105 aa9.93□□□□□ -0.82
CLCN3-210ENST00000515420 EGFEM1PQ0D2K5 195 aa9.93□□□□□ -0.82
CLCN3-210ENST00000515420 DEFB136Q30KP8 78 aa9.93□□□□□ -0.82
CLCN3-210ENST00000515420 FOXB2Q5VYV0 432 aa9.93□□□□□ -0.82
CLCN3-210ENST00000515420 MMD2Q8IY49 270 aa9.93□□□□□ -0.82
CLCN3-210ENST00000515420 DPF1Q92782 380 aa9.93□□□□□ -0.82
CLCN3-210ENST00000515420 MOB3AQ96BX8 217 aa9.93□□□□□ -0.82
CLCN3-210ENST00000515420 DCUN1D5Q9BTE7 237 aa9.93□□□□□ -0.82
CLCN3-210ENST00000515420 GNB4Q9HAV0 340 aa9.93□□□□□ -0.82
CLCN3-210ENST00000515420 CCL28Q9NRJ3 127 aa9.93□□□□□ -0.82
CLCN3-210ENST00000515420 TAS2R8Q9NYW2 309 aa9.93□□□□□ -0.82
CLCN3-210ENST00000515420 FAM25AB3EWG3 89 aa9.92□□□□□ -0.82
CLCN3-210ENST00000515420 FAM25CB3EWG5 89 aa9.92□□□□□ -0.82
CLCN3-210ENST00000515420 FAM25GB3EWG6 89 aa9.92□□□□□ -0.82
CLCN3-210ENST00000515420 HRASP01112 189 aa9.92□□□□□ -0.82
CLCN3-210ENST00000515420 FCER2P06734 321 aa9.92□□□□□ -0.82
CLCN3-210ENST00000515420 LGALS1P09382 135 aaKnown RBP9.92□□□□□ -0.82
CLCN3-210ENST00000515420 HRH1P35367 487 aa9.92□□□□□ -0.82
CLCN3-210ENST00000515420 RFX2P48378 723 aa9.92□□□□□ -0.82
CLCN3-210ENST00000515420 BRWD1-AS2P59051 145 aa9.92□□□□□ -0.82
CLCN3-210ENST00000515420 FXYD4P59646 89 aa9.92□□□□□ -0.82
CLCN3-210ENST00000515420 GNB1P62873 340 aa9.92□□□□□ -0.82
CLCN3-210ENST00000515420 ZNF616Q08AN1 781 aa9.92□□□□□ -0.82
CLCN3-210ENST00000515420 TNXAQ16473 311 aa9.92□□□□□ -0.82
CLCN3-210ENST00000515420 ZNF818PQ6ZRF7 136 aa9.92□□□□□ -0.82
CLCN3-210ENST00000515420 TMEM17Q86X19 198 aa9.92□□□□□ -0.82
CLCN3-210ENST00000515420 SNX29P2Q8IUI4 249 aa9.92□□□□□ -0.82
CLCN3-210ENST00000515420 CLVS1Q8IUQ0 354 aaPredicted RBP9.92□□□□□ -0.82
CLCN3-210ENST00000515420 LYSMD2Q8IV50 215 aa9.92□□□□□ -0.82
CLCN3-210ENST00000515420 PUSL1Q8N0Z8 303 aaKnown RBP9.92□□□□□ -0.82
CLCN3-210ENST00000515420 POC5Q8NA72 575 aa9.92□□□□□ -0.82
CLCN3-210ENST00000515420 OR11H1Q8NG94 326 aa9.92□□□□□ -0.82
CLCN3-210ENST00000515420 CD300LFQ8TDQ1 290 aa9.92□□□□□ -0.82
CLCN3-210ENST00000515420 SRSF12Q8WXF0 261 aaKnown RBP9.92□□□□□ -0.82
CLCN3-210ENST00000515420 RHOVQ96L33 236 aa9.92□□□□□ -0.82
CLCN3-210ENST00000515420 DUX3Q96PT4 197 aa9.92□□□□□ -0.82
CLCN3-210ENST00000515420 ZNF2Q9BSG1 426 aaPredicted RBP9.92□□□□□ -0.82
CLCN3-210ENST00000515420 ZNF430Q9H8G1 570 aaPredicted RBP9.92□□□□□ -0.82
CLCN3-210ENST00000515420 CCDC59Q9P031 241 aaKnown RBP9.92□□□□□ -0.82
CLCN3-210ENST00000515420 ZMAT5Q9UDW3 170 aaKnown RBP9.92□□□□□ -0.82
CLCN3-210ENST00000515420 A0A0G2JLM5 398 aa9.91□□□□□ -0.82
CLCN3-210ENST00000515420 ACTL6BO94805 426 aa9.91□□□□□ -0.82
CLCN3-210ENST00000515420 KBTBD11O94819 623 aa9.91□□□□□ -0.82
CLCN3-210ENST00000515420 OR2A4O95047 310 aa9.91□□□□□ -0.82
CLCN3-210ENST00000515420 PMP2P02689 132 aa9.91□□□□□ -0.82
CLCN3-210ENST00000515420 FGF2P09038 288 aa9.91□□□□□ -0.82
CLCN3-210ENST00000515420 GNRHRP30968 328 aa9.91□□□□□ -0.82
CLCN3-210ENST00000515420 MAS1LP35410 378 aa9.91□□□□□ -0.82
CLCN3-210ENST00000515420 SPCS2Q15005 226 aa9.91□□□□□ -0.82
CLCN3-210ENST00000515420 OR2B11Q5JQS5 317 aa9.91□□□□□ -0.82
CLCN3-210ENST00000515420 ASPHD1Q5U4P2 390 aa9.91□□□□□ -0.82
CLCN3-210ENST00000515420 IDO2Q6ZQW0 420 aa9.91□□□□□ -0.82
CLCN3-210ENST00000515420 OR1N2Q8NGR9 330 aa9.91□□□□□ -0.82
CLCN3-210ENST00000515420 OR6F1Q8NGZ6 308 aa9.91□□□□□ -0.82
CLCN3-210ENST00000515420 OR4A5Q8NH83 315 aa9.91□□□□□ -0.82
CLCN3-210ENST00000515420 TMEM167AQ8TBQ9 72 aa9.91□□□□□ -0.82
CLCN3-210ENST00000515420 OR2A7Q96R45 310 aa9.91□□□□□ -0.82
CLCN3-210ENST00000515420 SPIN2AQ99865 258 aa9.91□□□□□ -0.82
CLCN3-210ENST00000515420 SPIN2BQ9BPZ2 258 aa9.91□□□□□ -0.82
CLCN3-210ENST00000515420 RABL2AQ9UBK7 228 aaPredicted RBP9.91□□□□□ -0.82
CLCN3-210ENST00000515420 RABL2BQ9UNT1 228 aa9.91□□□□□ -0.82
CLCN3-210ENST00000515420 TNFSF12O43508 249 aa9.9□□□□□ -0.82
CLCN3-210ENST00000515420 NOL3O60936 208 aaKnown RBP9.9□□□□□ -0.82
CLCN3-210ENST00000515420 HPRT1P00492 218 aa9.9□□□□□ -0.82
CLCN3-210ENST00000515420 TRGV3P03979 118 aa9.9□□□□□ -0.82
CLCN3-210ENST00000515420 TBPP20226 339 aa9.9□□□□□ -0.82
CLCN3-210ENST00000515420 HLA-DMAP28067 261 aa9.9□□□□□ -0.82
CLCN3-210ENST00000515420 TPPP2P59282 170 aa9.9□□□□□ -0.82
CLCN3-210ENST00000515420 TAS2R31P59538 309 aa9.9□□□□□ -0.82
CLCN3-210ENST00000515420 MRPS10P82664 201 aaKnown RBP9.9□□□□□ -0.82
CLCN3-210ENST00000515420 POU2AF1Q16633 256 aa9.9□□□□□ -0.82
CLCN3-210ENST00000515420 VAX1Q5SQQ9 334 aa9.9□□□□□ -0.82
CLCN3-210ENST00000515420 LPCAT3Q6P1A2 487 aa9.9□□□□□ -0.82
CLCN3-210ENST00000515420 CMTM1Q8IZ96 169 aa9.9□□□□□ -0.82
CLCN3-210ENST00000515420 SPAG16Q8N0X2 631 aa9.9□□□□□ -0.82
CLCN3-210ENST00000515420 DYNC2LI1Q8TCX1 351 aa9.9□□□□□ -0.82
CLCN3-210ENST00000515420 PHB2Q99623 299 aa9.9□□□□□ -0.82
CLCN3-210ENST00000515420 TINAGL1Q9GZM7 467 aaPredicted RBP9.9□□□□□ -0.82
CLCN3-210ENST00000515420 PLEKHA2Q9HB19 425 aa9.9□□□□□ -0.82
CLCN3-210ENST00000515420 AURKAIP1Q9NWT8 199 aaPredicted RBP9.9□□□□□ -0.82
CLCN3-210ENST00000515420 BET1LQ9NYM9 111 aa9.9□□□□□ -0.82
CLCN3-210ENST00000515420 COMMD9Q9P000 198 aa9.9□□□□□ -0.82
CLCN3-210ENST00000515420 EXTL2Q9UBQ6 330 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms