RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 RAMP3O60896 148 aa9.57□□□□□ -0.88
PDLIM5-220ENST00000514830 OR2F2O95006 317 aa9.57□□□□□ -0.88
PDLIM5-220ENST00000514830 DUS4LO95620 317 aaKnown RBP9.57□□□□□ -0.88
PDLIM5-220ENST00000514830 CRYZL1O95825 349 aa9.57□□□□□ -0.88
PDLIM5-220ENST00000514830 HRASP01112 189 aa9.57□□□□□ -0.88
PDLIM5-220ENST00000514830 IGLV2-23P01705 113 aa9.57□□□□□ -0.88
PDLIM5-220ENST00000514830 IGHV4-59P01825 116 aa9.57□□□□□ -0.88
PDLIM5-220ENST00000514830 SERPINE2P07093 398 aa9.57□□□□□ -0.88
PDLIM5-220ENST00000514830 OR5AC1P0C628 307 aa9.57□□□□□ -0.88
PDLIM5-220ENST00000514830 SPNP16150 400 aa9.57□□□□□ -0.88
PDLIM5-220ENST00000514830 ANXA7P20073 488 aaKnown RBP9.57□□□□□ -0.88
PDLIM5-220ENST00000514830 DHRS2Q13268 280 aa9.57□□□□□ -0.88
PDLIM5-220ENST00000514830 RAB18Q9NP72 206 aa9.57□□□□□ -0.88
PDLIM5-220ENST00000514830 PLSCR3Q9NRY6 295 aa9.57□□□□□ -0.88
PDLIM5-220ENST00000514830 C1RLQ9NZP8 487 aa9.57□□□□□ -0.88
PDLIM5-220ENST00000514830 SHPKQ9UHJ6 478 aa9.57□□□□□ -0.88
PDLIM5-220ENST00000514830 DNAJC9-AS1A6NH13 148 aa9.56□□□□□ -0.88
PDLIM5-220ENST00000514830 SNRPGP15A8MWD9 76 aa9.56□□□□□ -0.88
PDLIM5-220ENST00000514830 ATG12O94817 140 aa9.56□□□□□ -0.88
PDLIM5-220ENST00000514830 DHFRP00374 187 aa9.56□□□□□ -0.88
PDLIM5-220ENST00000514830 IGKV1-39P01597 117 aa9.56□□□□□ -0.88
PDLIM5-220ENST00000514830 HLA-AP01891 365 aaKnown RBP9.56□□□□□ -0.88
PDLIM5-220ENST00000514830 IGKV1D-39P04432 117 aa9.56□□□□□ -0.88
PDLIM5-220ENST00000514830 IL6RP08887 468 aaPredicted RBP9.56□□□□□ -0.88
PDLIM5-220ENST00000514830 NQO2P16083 231 aa9.56□□□□□ -0.88
PDLIM5-220ENST00000514830 TMEM11P17152 192 aa9.56□□□□□ -0.88
PDLIM5-220ENST00000514830 LPAR6P43657 344 aa9.56□□□□□ -0.88
PDLIM5-220ENST00000514830 UBE2KP61086 200 aa9.56□□□□□ -0.88
PDLIM5-220ENST00000514830 SLC9A3R2Q15599 337 aa9.56□□□□□ -0.88
PDLIM5-220ENST00000514830 FBLN7Q53RD9 439 aa9.56□□□□□ -0.88
PDLIM5-220ENST00000514830 FAM71E2Q8N5Q1 922 aa9.56□□□□□ -0.88
PDLIM5-220ENST00000514830 TEX45Q8NA69 505 aa9.56□□□□□ -0.88
PDLIM5-220ENST00000514830 MITD1Q8WV92 249 aa9.56□□□□□ -0.88
PDLIM5-220ENST00000514830 RBPMSQ93062 196 aaKnown RBP9.56□□□□□ -0.88
PDLIM5-220ENST00000514830 SEC22AQ96IW7 307 aa9.56□□□□□ -0.88
PDLIM5-220ENST00000514830 HARBI1Q96MB7 349 aa9.56□□□□□ -0.88
PDLIM5-220ENST00000514830 NBEAL1Q6ZS30 2694 aa9.56□□□□□ -0.88
PDLIM5-220ENST00000514830 C7orf66A4D0T2 115 aa9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 MARCH11A6NNE9 402 aa9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 SRRM4A7MD48 611 aaKnown RBP9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 SHOXO15266 292 aa9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 NBR2O15453 112 aa9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 S1PR2O95136 353 aa9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 CRYGBP07316 175 aa9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 RNASE1P07998 156 aaKnown RBP9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 P0C879 139 aa9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 VAMP1P23763 118 aa9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 CD24P25063 80 aa9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 RPS16P62249 146 aaKnown RBP9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 HES1Q14469 280 aa9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 PSG5Q15238 335 aa9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 TRIM16LQ309B1 348 aa9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 SP6Q3SY56 376 aa9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 C4orf46Q504U0 113 aa9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 OR2B11Q5JQS5 317 aa9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 FAM219AQ8IW50 185 aa9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 PUSL1Q8N0Z8 303 aaKnown RBP9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 LGI3Q8N145 548 aa9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 OR4A5Q8NH83 315 aa9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 VSTM2AQ8TAG5 236 aa9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 ZNF431Q8TF32 576 aaPredicted RBP9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 LSM10Q969L4 123 aaKnown RBP9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 RITA1Q96K30 269 aa9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 RHOVQ96L33 236 aa9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 GPN1Q9HCN4 374 aaPredicted RBP9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 ESM1Q9NQ30 184 aa9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 BET1LQ9NYM9 111 aa9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 MOB4Q9Y3A3 225 aa9.55□□□□□ -0.88
PDLIM5-220ENST00000514830 TNCP24821 2201 aa9.54□□□□□ -0.88
PDLIM5-220ENST00000514830 DBX1A6NMT0 343 aa9.54□□□□□ -0.88
PDLIM5-220ENST00000514830 RRHO14718 337 aa9.54□□□□□ -0.88
PDLIM5-220ENST00000514830 TCF21O43680 179 aa9.54□□□□□ -0.88
PDLIM5-220ENST00000514830 F2RL1P55085 397 aa9.54□□□□□ -0.88
PDLIM5-220ENST00000514830 C5orf64Q2M2E5 130 aa9.54□□□□□ -0.88
PDLIM5-220ENST00000514830 ANKRD55Q3KP44 614 aa9.54□□□□□ -0.88
PDLIM5-220ENST00000514830 VMA21Q3ZAQ7 101 aa9.54□□□□□ -0.88
PDLIM5-220ENST00000514830 SELENOHQ8IZQ5 122 aaKnown RBP9.54□□□□□ -0.88
PDLIM5-220ENST00000514830 Q8N9W7 124 aa9.54□□□□□ -0.88
PDLIM5-220ENST00000514830 COQ8AQ8NI60 647 aa9.54□□□□□ -0.88
PDLIM5-220ENST00000514830 LHFPL5Q8TAF8 219 aa9.54□□□□□ -0.88
PDLIM5-220ENST00000514830 TMEM167AQ8TBQ9 72 aa9.54□□□□□ -0.88
PDLIM5-220ENST00000514830 R3HDM4Q96D70 268 aa9.54□□□□□ -0.88
PDLIM5-220ENST00000514830 SLC25A33Q9BSK2 321 aa9.54□□□□□ -0.88
PDLIM5-220ENST00000514830 CHIAQ9BZP6 476 aa9.54□□□□□ -0.88
PDLIM5-220ENST00000514830 A0A0B4J293 547 aa9.53□□□□□ -0.88
PDLIM5-220ENST00000514830 CHST1O43916 411 aa9.53□□□□□ -0.88
PDLIM5-220ENST00000514830 CREBL2O60519 120 aaPredicted RBP9.53□□□□□ -0.88
PDLIM5-220ENST00000514830 KBTBD11O94819 623 aa9.53□□□□□ -0.88
PDLIM5-220ENST00000514830 OR2A4O95047 310 aa9.53□□□□□ -0.88
PDLIM5-220ENST00000514830 IGKV1-5P01602 117 aa9.53□□□□□ -0.88
PDLIM5-220ENST00000514830 HLA-DRB1P01911 266 aa9.53□□□□□ -0.88
PDLIM5-220ENST00000514830 AMY1AP04745 511 aa9.53□□□□□ -0.88
PDLIM5-220ENST00000514830 SAA1P0DJI8 122 aaPredicted RBP9.53□□□□□ -0.88
PDLIM5-220ENST00000514830 VDAC1P21796 283 aa9.53□□□□□ -0.88
PDLIM5-220ENST00000514830 ERVK-16P61578 105 aa9.53□□□□□ -0.88
PDLIM5-220ENST00000514830 HNF4GQ14541 408 aa9.53□□□□□ -0.88
PDLIM5-220ENST00000514830 MMDQ15546 238 aa9.53□□□□□ -0.88
PDLIM5-220ENST00000514830 TMEM268Q5VZI3 342 aa9.53□□□□□ -0.88
PDLIM5-220ENST00000514830 ZNF695Q8IW36 515 aa9.53□□□□□ -0.88
PDLIM5-220ENST00000514830 C5orf56Q8N8D9 126 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms