RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 TMEM267Q0VDI3 215 aaPredicted RBP6.45□□□□□ -1.38
NEDD4-210ENST00000513957 FOXE3Q13461 319 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 EIF4EBP1Q13541 118 aaPredicted RBP6.45□□□□□ -1.38
NEDD4-210ENST00000513957 VMA21Q3ZAQ7 101 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 PYHIN1Q6K0P9 492 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 LPCAT3Q6P1A2 487 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 ZNF562Q6V9R5 426 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 GLDNQ6ZMI3 551 aaPredicted RBP6.45□□□□□ -1.38
NEDD4-210ENST00000513957 PPP1R27Q86WC6 154 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 TMEM17Q86X19 198 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 SNX29P2Q8IUI4 249 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 LAX1Q8IWV1 398 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 ARRDC1Q8N5I2 433 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 DRAXINQ8NBI3 349 aaPredicted RBP6.45□□□□□ -1.38
NEDD4-210ENST00000513957 OR6F1Q8NGZ6 308 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 OR4S2Q8NH73 311 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 CD300LFQ8TDQ1 290 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 MOB3AQ96BX8 217 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 HARBI1Q96MB7 349 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 TMEM68Q96MH6 324 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 HSPB9Q9BQS6 159 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 NXF2Q9GZY0 626 aaKnown RBP6.45□□□□□ -1.38
NEDD4-210ENST00000513957 RBM38Q9H0Z9 239 aaKnown RBP6.45□□□□□ -1.38
NEDD4-210ENST00000513957 TAS2R8Q9NYW2 309 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 METTL1Q9UBP6 276 aaKnown RBP6.45□□□□□ -1.38
NEDD4-210ENST00000513957 RSL24D1Q9UHA3 163 aaKnown RBP6.45□□□□□ -1.38
NEDD4-210ENST00000513957 CEPT1Q9Y6K0 416 aa6.45□□□□□ -1.38
NEDD4-210ENST00000513957 IGKV1D-13A0A0B4J2D9 117 aa6.44□□□□□ -1.38
NEDD4-210ENST00000513957 TCRBV4S1A1TA0A5B7 111 aa6.44□□□□□ -1.38
NEDD4-210ENST00000513957 MEIS3P1A6NDR6 274 aa6.44□□□□□ -1.38
NEDD4-210ENST00000513957 CCDC160A6NGH7 325 aa6.44□□□□□ -1.38
NEDD4-210ENST00000513957 SH2D7A6NKC9 451 aaPredicted RBP6.44□□□□□ -1.38
NEDD4-210ENST00000513957 LINC00473A8K010 186 aa6.44□□□□□ -1.38
NEDD4-210ENST00000513957 LY86O95711 162 aa6.44□□□□□ -1.38
NEDD4-210ENST00000513957 IGKV1-13P0DP09 117 aa6.44□□□□□ -1.38
NEDD4-210ENST00000513957 CD28P10747 220 aa6.44□□□□□ -1.38
NEDD4-210ENST00000513957 PTHLHP12272 177 aa6.44□□□□□ -1.38
NEDD4-210ENST00000513957 HRH1P35367 487 aa6.44□□□□□ -1.38
NEDD4-210ENST00000513957 UCP3P55916 312 aa6.44□□□□□ -1.38
NEDD4-210ENST00000513957 CFHR3Q02985 330 aa6.44□□□□□ -1.38
NEDD4-210ENST00000513957 PSG5Q15238 335 aa6.44□□□□□ -1.38
NEDD4-210ENST00000513957 AKIRIN2Q53H80 203 aa6.44□□□□□ -1.38
NEDD4-210ENST00000513957 CXorf66Q5JRM2 361 aaPredicted RBP6.44□□□□□ -1.38
NEDD4-210ENST00000513957 CCDC28AQ8IWP9 274 aa6.44□□□□□ -1.38
NEDD4-210ENST00000513957 CMTM1Q8IZ96 169 aa6.44□□□□□ -1.38
NEDD4-210ENST00000513957 TEX45Q8NA69 505 aa6.44□□□□□ -1.38
NEDD4-210ENST00000513957 SECTM1Q8WVN6 248 aa6.44□□□□□ -1.38
NEDD4-210ENST00000513957 FCAMRQ8WWV6 532 aa6.44□□□□□ -1.38
NEDD4-210ENST00000513957 C5orf30Q96GV9 206 aa6.44□□□□□ -1.38
NEDD4-210ENST00000513957 CITED2Q99967 270 aaPredicted RBP6.44□□□□□ -1.38
NEDD4-210ENST00000513957 C6orf62Q9GZU0 229 aaPredicted RBP6.44□□□□□ -1.38
NEDD4-210ENST00000513957 MIXL1Q9H2W2 232 aa6.44□□□□□ -1.38
NEDD4-210ENST00000513957 FAM212BQ9NTI7 297 aaPredicted RBP6.44□□□□□ -1.38
NEDD4-210ENST00000513957 MTFP1Q9UDX5 166 aa6.44□□□□□ -1.38
NEDD4-210ENST00000513957 PLXNB1O43157 2135 aa6.44□□□□□ -1.38
NEDD4-210ENST00000513957 WNK1Q9H4A3 2382 aa6.44□□□□□ -1.38
NEDD4-210ENST00000513957 H3BUA1 57 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 ATP6V0E1O15342 81 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 SLC25A17O43808 307 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 CRYZL1O95825 349 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 HRASP01112 189 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 IGLV2-23P01705 113 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 CRYGBP07316 175 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 PTBP1P26599 531 aaKnown RBP eCLIP6.43□□□□□ -1.38
NEDD4-210ENST00000513957 CNTFRP26992 372 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 PSMB8P28062 276 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 CD40LGP29965 261 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 PPIFP30405 207 aaKnown RBP6.43□□□□□ -1.38
NEDD4-210ENST00000513957 RFX2P48378 723 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 TAS2R19P59542 299 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 TSPAN5P62079 268 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 RPL23AP62750 156 aaKnown RBP6.43□□□□□ -1.38
NEDD4-210ENST00000513957 RPP30P78346 268 aaKnown RBP6.43□□□□□ -1.38
NEDD4-210ENST00000513957 CX3CL1P78423 397 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 MEF2DQ14814 521 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 RNASE10Q5GAN6 216 aaKnown RBP6.43□□□□□ -1.38
NEDD4-210ENST00000513957 CADM3Q8N126 398 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 POC5Q8NA72 575 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 MINDY2Q8NBR6 621 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 OR5M8Q8NGP6 311 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 MCFD2Q8NI22 146 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 SMIM4Q8WVI0 70 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 TCTEX1D2Q8WW35 142 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 DEDD2Q8WXF8 326 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 ARPC1AQ92747 370 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 ZNF486Q96H40 463 aaPredicted RBP6.43□□□□□ -1.38
NEDD4-210ENST00000513957 DIRAS2Q96HU8 199 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 RITA1Q96K30 269 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 NOL4LQ96MY1 436 aaPredicted RBP6.43□□□□□ -1.38
NEDD4-210ENST00000513957 ABHD1Q96SE0 405 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 ZNF2Q9BSG1 426 aaPredicted RBP6.43□□□□□ -1.38
NEDD4-210ENST00000513957 SLC5A7Q9GZV3 580 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 FBXL15Q9H469 300 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 PARP11Q9NR21 331 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 COMMD9Q9P000 198 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 TRRAPQ9Y4A5 3859 aa6.43□□□□□ -1.38
NEDD4-210ENST00000513957 TNCP24821 2201 aa6.42□□□□□ -1.38
NEDD4-210ENST00000513957 TRAV41A0A0B4J266 112 aa6.42□□□□□ -1.38
NEDD4-210ENST00000513957 LOC102723971A0A1B0GUV8 181 aa6.42□□□□□ -1.38
NEDD4-210ENST00000513957 GPR31O00270 319 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms