RNA–Protein interactions for RNA: ENST00000513248.1

NUP54-212, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-212ENST00000513248 KISS1Q15726 138 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 NSUN5P1Q3KNT7 163 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 SLC22A6Q4U2R8 563 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 CCDC58Q4VC31 144 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 MINOS1Q5TGZ0 78 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 OR2G6Q5TZ20 316 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 ASPHD2Q6ICH7 369 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 RPL22L1Q6P5R6 122 aaKnown RBP2.74□□□□□ -1.97
NUP54-212ENST00000513248 BAIAP2L2Q6UXY1 529 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 Q6ZRG5 221 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 AHSA2Q719I0 299 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 LHFPL4Q7Z7J7 247 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 SAXO1Q8IYX7 474 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 JAGN1Q8N5M9 183 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 PACRGLQ8N7B6 248 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 SAMD12Q8N8I0 201 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 ZFP41Q8N8Y5 198 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 ZNF565Q8N9K5 539 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 CHST4Q8NCG5 386 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 BPIFB6Q8NFQ5 453 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 OR4S1Q8NGB4 309 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 OR6M1Q8NGM8 313 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 LINC01006Q8NI28 216 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 TNFRSF14Q92956 283 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 TMEM106AQ96A25 262 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 RPEQ96AT9 228 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 CREB3L1Q96BA8 519 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 MALSU1Q96EH3 234 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 CCDC90BQ9GZT6 254 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 TMEM133Q9H2Q1 129 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 VCX3BQ9H321 246 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 RHOFQ9HBH0 211 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 HES4Q9HCC6 221 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 FGF20Q9NP95 211 aaPredicted RBP2.74□□□□□ -1.97
NUP54-212ENST00000513248 TMEM138Q9NPI0 162 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 BABAM2Q9NXR7 383 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 SCN3BQ9NY72 215 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 TAS2R3Q9NYW6 316 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 DPM3Q9P2X0 92 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 ZNF107Q9UII5 783 aaPredicted RBP2.74□□□□□ -1.97
NUP54-212ENST00000513248 KIF25Q9UIL4 384 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 ST3GAL6Q9Y274 331 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 ERGIC3Q9Y282 383 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 AMMECR1Q9Y4X0 333 aaPredicted RBP2.74□□□□□ -1.97
NUP54-212ENST00000513248 MINOS1-NBL1R4GNA1 71 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 TANC2Q9HCD6 1990 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 PLCE1Q9P212 2302 aa2.74□□□□□ -1.97
NUP54-212ENST00000513248 IGKV1-12A0A0C4DH73 117 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 TMEM30CPA0ZSE6 113 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 ODAMA1E959 279 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 ERICH4A6NGS2 130 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 ZNF729A6NN14 1252 aaPredicted RBP2.73□□□□□ -1.97
NUP54-212ENST00000513248 A8MU10 97 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 C17orf98A8MV24 154 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 MCRIP1C9JLW8 97 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 J3QRE1 110 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 AIPO00170 330 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 SDCBPO00560 298 aaPredicted RBP2.73□□□□□ -1.97
NUP54-212ENST00000513248 GABRPO00591 440 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 PHOX2AO14813 284 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 ARPC1BO15143 372 aaKnown RBP2.73□□□□□ -1.97
NUP54-212ENST00000513248 ZNF780AO75290 641 aaPredicted RBP2.73□□□□□ -1.97
NUP54-212ENST00000513248 ZNF253O75346 499 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 ZNF737O75373 536 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 CRTAPO75718 401 aaPredicted RBP2.73□□□□□ -1.97
NUP54-212ENST00000513248 OR7C1O76099 320 aaPredicted RBP2.73□□□□□ -1.97
NUP54-212ENST00000513248 KBTBD11O94819 623 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 IGKV1D-12P01611 117 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 IGHV3-7P01780 117 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 HSMCR30P0CW71 290 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 DNAH10OSP0CZ25 163 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 GTF2F2P13984 249 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 CELP19835 753 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 CD24P25063 80 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 IL3RAP26951 378 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 MAPK3P27361 379 aaPredicted RBP2.73□□□□□ -1.97
NUP54-212ENST00000513248 ERP29P30040 261 aaKnown RBP2.73□□□□□ -1.97
NUP54-212ENST00000513248 KIR2DS4P43632 304 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 HERV-K104P63124 156 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 DEFA6Q01524 100 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 EMX1Q04741 257 aaPredicted RBP2.73□□□□□ -1.97
NUP54-212ENST00000513248 GABPB1Q06547 395 aaPredicted RBP2.73□□□□□ -1.97
NUP54-212ENST00000513248 ST3GAL4Q11206 333 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 CDK5R1Q15078 307 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 AANATQ16613 207 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 HAGHQ16775 308 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 Q1RN00 199 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 PIGYQ3MUY2 71 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 Q499Y3 187 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 YIF1BQ5BJH7 314 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 RBM48Q5RL73 367 aaKnown RBP2.73□□□□□ -1.97
NUP54-212ENST00000513248 UTF1Q5T230 341 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 TPTE2P1Q5T6R2 138 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 HCP5Q6MZN7 132 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 Q6ZSR3 168 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 MOB3BQ86TA1 216 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 OSR2Q8N2R0 312 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 PXT1Q8NFP0 134 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 BEST4Q8NFU0 473 aa2.73□□□□□ -1.97
NUP54-212ENST00000513248 OR11H6Q8NGC7 330 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms