RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 PLEKHA1Q9HB21 404 aa2.87□□□□□ -1.95
HTT-210ENST00000512909 NEK6Q9HC98 313 aa2.87□□□□□ -1.95
HTT-210ENST00000512909 GPR84Q9NQS5 396 aa2.87□□□□□ -1.95
HTT-210ENST00000512909 SLC2A8Q9NY64 477 aa2.87□□□□□ -1.95
HTT-210ENST00000512909 ENPP5Q9UJA9 477 aa2.87□□□□□ -1.95
HTT-210ENST00000512909 SLC22A13Q9Y226 551 aa2.87□□□□□ -1.95
HTT-210ENST00000512909 MPC1Q9Y5U8 109 aa2.87□□□□□ -1.95
HTT-210ENST00000512909 FREM1Q5H8C1 2179 aa2.87□□□□□ -1.95
HTT-210ENST00000512909 LRBAP50851 2863 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 ANKRD17O75179 2603 aaKnown RBP2.86□□□□□ -1.95
HTT-210ENST00000512909 IGKV1D-8A0A087WSZ0 117 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 TRAV40A0A0B4J280 105 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 MDFIC2A0A1B0GVS7 189 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 A0A1W2PQL4 384 aaPredicted RBP2.86□□□□□ -1.95
HTT-210ENST00000512909 OR2AT4A6NND4 320 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 ZNF879B4DU55 563 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 ANKRD65E5RJM6 399 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 ANGPTL7O43827 346 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 ENTPD6O75354 484 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 CST4P01036 141 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 RPSAP08865 295 aaKnown RBP2.86□□□□□ -1.95
HTT-210ENST00000512909 HTR1AP08908 422 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 CHTF8P0CG12 524 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 PIPP12273 146 aaPredicted RBP2.86□□□□□ -1.95
HTT-210ENST00000512909 MUC1P15941 1255 aaPredicted RBP2.86□□□□□ -1.95
HTT-210ENST00000512909 EDDM3BP56851 147 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 KRTAP10-3P60369 221 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 HERVK_113P61574 105 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 GNG3P63215 75 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 DYNC1I2Q13409 638 aaKnown RBP2.86□□□□□ -1.95
HTT-210ENST00000512909 ZNF181Q2M3W8 571 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 DEFB112Q30KQ8 113 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 MAJINQ3KP22 176 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 CEACAM21Q3KPI0 293 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 KCTD21Q4G0X4 260 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 CLVS2Q5SYC1 327 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 NXNL2Q5VZ03 156 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 C12orf73Q69YU5 71 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 KDM4DQ6B0I6 523 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 ZFP1Q6P2D0 407 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 FAHD1Q6P587 224 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 C16orf87Q6PH81 154 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 DEGS2Q6QHC5 323 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 WDR82Q6UXN9 313 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 CAMK2N1Q7Z7J9 78 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 TRAPPC6BQ86SZ2 158 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 TMEM61Q8N0U2 210 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 CBR4Q8N4T8 237 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 FAM216BQ8N7L0 139 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 ZNF676Q8N7Q3 588 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 ASCC1Q8N9N2 400 aaKnown RBP2.86□□□□□ -1.95
HTT-210ENST00000512909 OR5A2Q8NGI9 324 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 OR8J1Q8NGP2 316 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 CYGBQ8WWM9 190 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 MYDGFQ969H8 173 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 BORCS8Q96FH0 119 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 MRPL48Q96GC5 212 aaKnown RBP2.86□□□□□ -1.95
HTT-210ENST00000512909 Q96MT0 163 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 OR8B4Q96RC9 309 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 MYCBPQ99417 103 aaPredicted RBP2.86□□□□□ -1.95
HTT-210ENST00000512909 GPER1Q99527 375 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 HDHD3Q9BSH5 251 aaPredicted RBP2.86□□□□□ -1.95
HTT-210ENST00000512909 C9orf16Q9BUW7 83 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 OSBPL10Q9BXB5 764 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 C20orf85Q9H1P6 137 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 RGCCQ9H4X1 137 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 ABCB9Q9NP78 766 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 SIRT7Q9NRC8 400 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 OPN4Q9UHM6 478 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 GLS2Q9UI32 602 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 ING4Q9UNL4 249 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 CAB39Q9Y376 341 aaPredicted RBP2.86□□□□□ -1.95
HTT-210ENST00000512909 PEX16Q9Y5Y5 336 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 R4GMQ9 66 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 USF3Q68DE3 2245 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 MED13LQ71F56 2210 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 HEATR1Q9H583 2144 aaKnown RBP2.86□□□□□ -1.95
HTT-210ENST00000512909 OTOGQ6ZRI0 2925 aa2.86□□□□□ -1.95
HTT-210ENST00000512909 ABCA4P78363 2273 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 DCHS2Q6V1P9 2916 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 TRBV6-6A0A0A6YYG2 114 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 CENPVL3A0A0U1RRI6 287 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 LOC100130705A0A1B0GUX0 176 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 A0A1B0GW55 424 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 WI2-2373I1.2A0A1W2PRP0 233 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 RFPL4AA6NLU0 287 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 TMEM210A6NLX4 147 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 RFPL4AL1F8VTS6 287 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 DLGAP1O14490 977 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 HSD17B6O14756 317 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 NBR2O15453 112 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 SYNGR1O43759 233 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 DHRS3O75911 302 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 FADS2O95864 444 aaKnown RBP2.85□□□□□ -1.95
HTT-210ENST00000512909 LHBP01229 141 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 TTRP02766 147 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 DUX4L2P0CJ85 424 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 DUX4L3P0CJ86 424 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 DUX4L5P0CJ88 424 aa2.85□□□□□ -1.95
HTT-210ENST00000512909 DUX4L6P0CJ89 424 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms