RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 SGMS2Q8NHU3 365 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 CCDC12Q8WUD4 166 aaPredicted RBP-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 ACOT12Q8WYK0 555 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 AQP3Q92482 292 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 RNASE6Q93091 150 aaKnown RBP-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 LRRC39Q96DD0 335 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 HBEGFQ99075 208 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 TMEM208Q9BTX3 173 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 PRRG3Q9BZD7 231 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 OR51B6Q9H340 312 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 METTL8Q9H825 291 aaKnown RBP-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 NIT2Q9NQR4 276 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 OR5AC2Q9NZP5 309 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 CD300AQ9UGN4 299 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 NXT1Q9UKK6 140 aaKnown RBP-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 ZFP30Q9Y2G7 519 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 GMEB1Q9Y692 573 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 BZW2Q9Y6E2 419 aaKnown RBP-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 FAT1Q14517 4588 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 EML6Q6ZMW3 1958 aa-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 EIF4G1Q04637 1599 aaKnown RBP-0.03□□□□□ -2.41
PDGFC-208ENST00000512711 DOPEY1Q5JWR5 2465 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 RIF1Q5UIP0 2472 aaKnown RBP-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 TNXBP22105 4242 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 SYNRGQ9UMZ2 1314 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 A0A087WUU8 490 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 TRAV8-1A0A0A6YYK1 113 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 GSTTP1A0A1W2PQM5 241 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 OR51F1A6NGY5 319 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 C21orf140B9A014 251 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 H0YIV9 168 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 M0R381 172 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 SULT1C2O00338 296 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 COCHO43405 550 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 TNFAIP8O95379 198 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 MT-CO2P00403 227 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 PMP2P02689 132 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 HLA-DQB2P05538 268 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 KRTAP2-3P0C7H8 128 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 RNASE3P12724 160 aaKnown RBP-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 MSNP26038 577 aaKnown RBP-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 HAAOP46952 286 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 OR10A3P58181 314 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 DAD1P61803 113 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 TBPL1P62380 186 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 TMEM267Q0VDI3 215 aaPredicted RBP-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 GNA13Q14344 377 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 FAM27BQ5VT28 67 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 PDPK2PQ6A1A2 396 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 RASSF6Q6ZTQ3 369 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 MRPL52Q86TS9 123 aaKnown RBP-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 C1orf158Q8N1D5 194 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 RPP25LQ8N5L8 163 aaKnown RBP-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 OR4C6Q8NH72 309 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 DYNC2LI1Q8TCX1 351 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 Q8WTZ3 238 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 ASB13Q8WXK3 278 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 PPWD1Q96BP3 646 aaKnown RBP-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 TMEM56Q96MV1 263 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 OR7D2Q96RA2 312 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 MED10Q9BTT4 135 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 KRTAP2-4Q9BYR9 128 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 YIPF3Q9GZM5 350 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 CHST6Q9GZX3 395 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 C10orf95Q9H7T3 257 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 ZNHIT6Q9NWK9 470 aaKnown RBP-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 MAT2BQ9NZL9 334 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 EMC3Q9P0I2 261 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 RBMX2Q9Y388 322 aaKnown RBP-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 SBDSQ9Y3A5 250 aaKnown RBP eCLIP-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 TNCP24821 2201 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 CACNA1AO00555 2505 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 SIPA1L1O43166 1804 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 BPTFQ12830 3046 aa-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 NSD1Q96L73 2696 aaPredicted RBP-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 SCAF11Q99590 1463 aaKnown RBP-0.04□□□□□ -2.42
PDGFC-208ENST00000512711 NCOR2Q9Y618 2525 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 TENM4Q6N022 2769 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 KIF24Q5T7B8 1368 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 TONSLQ96HA7 1378 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 EP300Q09472 2414 aaPredicted RBP-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 LRP2P98164 4655 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 A0A1B0GX12 115 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 IRGMA1A4Y4 181 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 OR6C6A6NF89 314 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 CLDN25C9JDP6 229 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 TRAPPC2LH3BP13 241 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 K7ERQ8 282 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 COPEO14579 308 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 LIN7AO14910 233 aaPredicted RBP-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 NCR3O14931 201 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 OR2T1O43869 369 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 LDOC1O95751 146 aaPredicted RBP-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 LIMS3P0CW19 117 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 LIMS4P0CW20 117 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 NQO2P16083 231 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 PVALBP20472 110 aaPredicted RBP-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 CFL1P23528 166 aaKnown RBP-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 SLCO1A2P46721 670 aa-0.05□□□□□ -2.42
PDGFC-208ENST00000512711 EIF2B2P49770 351 aaKnown RBP-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms