RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 ZBTB8BQ8NAP8 495 aaPredicted RBP6.88□□□□□ -1.31
NUP54-211ENST00000512151 ENKURQ8TC29 256 aa6.88□□□□□ -1.31
NUP54-211ENST00000512151 TRIM63Q969Q1 353 aa6.88□□□□□ -1.31
NUP54-211ENST00000512151 S100A16Q96FQ6 103 aaKnown RBP6.88□□□□□ -1.31
NUP54-211ENST00000512151 SPACA1Q9HBV2 294 aa6.88□□□□□ -1.31
NUP54-211ENST00000512151 PLEKHJ1Q9NW61 149 aa6.88□□□□□ -1.31
NUP54-211ENST00000512151 ZNF107Q9UII5 783 aaPredicted RBP6.88□□□□□ -1.31
NUP54-211ENST00000512151 LINC00854A0A1B0GVQ3 168 aa6.87□□□□□ -1.31
NUP54-211ENST00000512151 TMEM235A6NFC5 223 aa6.87□□□□□ -1.31
NUP54-211ENST00000512151 HMX3A6NHT5 357 aa6.87□□□□□ -1.31
NUP54-211ENST00000512151 ZNF729A6NN14 1252 aaPredicted RBP6.87□□□□□ -1.31
NUP54-211ENST00000512151 H0Y980 276 aa6.87□□□□□ -1.31
NUP54-211ENST00000512151 MOSP00540 346 aa6.87□□□□□ -1.31
NUP54-211ENST00000512151 HSPB1P04792 205 aaKnown RBP6.87□□□□□ -1.31
NUP54-211ENST00000512151 GLAP06280 429 aa6.87□□□□□ -1.31
NUP54-211ENST00000512151 HLA-DMAP28067 261 aa6.87□□□□□ -1.31
NUP54-211ENST00000512151 INPP1P49441 399 aa6.87□□□□□ -1.31
NUP54-211ENST00000512151 CD81P60033 236 aa6.87□□□□□ -1.31
NUP54-211ENST00000512151 PAX5Q02548 391 aa6.87□□□□□ -1.31
NUP54-211ENST00000512151 LTC4SQ16873 150 aa6.87□□□□□ -1.31
NUP54-211ENST00000512151 C19orf54Q5BKX5 351 aa6.87□□□□□ -1.31
NUP54-211ENST00000512151 KRBOX4Q5JUW0 171 aa6.87□□□□□ -1.31
NUP54-211ENST00000512151 LCE1DQ5T752 114 aa6.87□□□□□ -1.31
NUP54-211ENST00000512151 PLET1Q6UQ28 207 aa6.87□□□□□ -1.31
NUP54-211ENST00000512151 ZNF497Q6ZNH5 498 aa6.87□□□□□ -1.31
NUP54-211ENST00000512151 OR13A1Q8NGR1 328 aa6.87□□□□□ -1.31
NUP54-211ENST00000512151 OR6F1Q8NGZ6 308 aa6.87□□□□□ -1.31
NUP54-211ENST00000512151 OR4K15Q8NH41 348 aa6.87□□□□□ -1.31
NUP54-211ENST00000512151 MRPL30Q8TCC3 161 aaKnown RBP6.87□□□□□ -1.31
NUP54-211ENST00000512151 CCDC107Q8WV48 283 aa6.87□□□□□ -1.31
NUP54-211ENST00000512151 ABHD1Q96SE0 405 aa6.87□□□□□ -1.31
NUP54-211ENST00000512151 AUNIPQ9H7T9 357 aa6.87□□□□□ -1.31
NUP54-211ENST00000512151 SRD5A3Q9H8P0 318 aa6.87□□□□□ -1.31
NUP54-211ENST00000512151 DIABLOQ9NR28 239 aa6.87□□□□□ -1.31
NUP54-211ENST00000512151 OR6C3Q9NZP0 311 aa6.87□□□□□ -1.31
NUP54-211ENST00000512151 KIF25Q9UIL4 384 aa6.87□□□□□ -1.31
NUP54-211ENST00000512151 IGKV1D-8A0A087WSZ0 117 aa6.86□□□□□ -1.31
NUP54-211ENST00000512151 A0A0A6YYH2 397 aa6.86□□□□□ -1.31
NUP54-211ENST00000512151 TRAV41A0A0B4J266 112 aa6.86□□□□□ -1.31
NUP54-211ENST00000512151 A0A0B4J293 547 aa6.86□□□□□ -1.31
NUP54-211ENST00000512151 KBTBD11-OT1A0A1B0GTJ5 212 aa6.86□□□□□ -1.31
NUP54-211ENST00000512151 A6NJ64 397 aa6.86□□□□□ -1.31
NUP54-211ENST00000512151 LANCL1O43813 399 aa6.86□□□□□ -1.31
NUP54-211ENST00000512151 CCNKO75909 580 aa6.86□□□□□ -1.31
NUP54-211ENST00000512151 NAPSAO96009 420 aa6.86□□□□□ -1.31
NUP54-211ENST00000512151 GSTP1P09211 210 aaKnown RBP6.86□□□□□ -1.31
NUP54-211ENST00000512151 CD7P09564 240 aa6.86□□□□□ -1.31
NUP54-211ENST00000512151 KCNJ3P48549 501 aa6.86□□□□□ -1.31
NUP54-211ENST00000512151 CBX3Q13185 183 aa6.86□□□□□ -1.31
NUP54-211ENST00000512151 TMEM69Q5SWH9 247 aa6.86□□□□□ -1.31
NUP54-211ENST00000512151 ZNF57Q68EA5 555 aaPredicted RBP6.86□□□□□ -1.31
NUP54-211ENST00000512151 ZNF880Q6PDB4 577 aa6.86□□□□□ -1.31
NUP54-211ENST00000512151 LYG2Q86SG7 212 aa6.86□□□□□ -1.31
NUP54-211ENST00000512151 NEK7Q8TDX7 302 aa6.86□□□□□ -1.31
NUP54-211ENST00000512151 C15orf40Q8WUR7 153 aa6.86□□□□□ -1.31
NUP54-211ENST00000512151 PHLDA1Q8WV24 401 aaPredicted RBP6.86□□□□□ -1.31
NUP54-211ENST00000512151 NUDCD2Q8WVJ2 157 aa6.86□□□□□ -1.31
NUP54-211ENST00000512151 MAFIPQ8WZ33 124 aa6.86□□□□□ -1.31
NUP54-211ENST00000512151 FLYWCH2Q96CP2 140 aaKnown RBP6.86□□□□□ -1.31
NUP54-211ENST00000512151 CMSS1Q9BQ75 279 aaKnown RBP6.86□□□□□ -1.31
NUP54-211ENST00000512151 C7orf50Q9BRJ6 194 aaKnown RBP6.86□□□□□ -1.31
NUP54-211ENST00000512151 MARVELD1Q9BSK0 173 aa6.86□□□□□ -1.31
NUP54-211ENST00000512151 PARP11Q9NR21 331 aa6.86□□□□□ -1.31
NUP54-211ENST00000512151 MRPS7Q9Y2R9 242 aaKnown RBP6.86□□□□□ -1.31
NUP54-211ENST00000512151 APOBP04114 4563 aaKnown RBP6.86□□□□□ -1.31
NUP54-211ENST00000512151 LRP1BQ9NZR2 4599 aa6.86□□□□□ -1.31
NUP54-211ENST00000512151 MEIKINA0A087WXM9 373 aa6.85□□□□□ -1.31
NUP54-211ENST00000512151 IGHV7-81A0A0B4J1V7 117 aa6.85□□□□□ -1.31
NUP54-211ENST00000512151 FAM240BA0A1B0GVZ2 78 aa6.85□□□□□ -1.31
NUP54-211ENST00000512151 TMEM30CPA0ZSE6 113 aa6.85□□□□□ -1.31
NUP54-211ENST00000512151 MEIS3P1A6NDR6 274 aa6.85□□□□□ -1.31
NUP54-211ENST00000512151 PRSS29PA6NIE9 313 aa6.85□□□□□ -1.31
NUP54-211ENST00000512151 RTL8CO15255 209 aa6.85□□□□□ -1.31
NUP54-211ENST00000512151 SCGNO76038 276 aa6.85□□□□□ -1.31
NUP54-211ENST00000512151 GAPDHP04406 335 aaKnown RBP6.85□□□□□ -1.31
NUP54-211ENST00000512151 CSN3P07498 182 aa6.85□□□□□ -1.31
NUP54-211ENST00000512151 RCC1P18754 421 aaPredicted RBP6.85□□□□□ -1.31
NUP54-211ENST00000512151 NDPQ00604 133 aa6.85□□□□□ -1.31
NUP54-211ENST00000512151 TNFRSF9Q07011 255 aa6.85□□□□□ -1.31
NUP54-211ENST00000512151 ARFRP1Q13795 201 aa6.85□□□□□ -1.31
NUP54-211ENST00000512151 OR10X1Q8NGY0 326 aa6.85□□□□□ -1.31
NUP54-211ENST00000512151 RFESDQ8TAC1 157 aa6.85□□□□□ -1.31
NUP54-211ENST00000512151 UBALD1Q8TB05 177 aa6.85□□□□□ -1.31
NUP54-211ENST00000512151 MRGPRDQ8TDS7 321 aa6.85□□□□□ -1.31
NUP54-211ENST00000512151 SMIM4Q8WVI0 70 aa6.85□□□□□ -1.31
NUP54-211ENST00000512151 DEDD2Q8WXF8 326 aa6.85□□□□□ -1.31
NUP54-211ENST00000512151 ST6GAL2Q96JF0 529 aa6.85□□□□□ -1.31
NUP54-211ENST00000512151 NCOR1P1Q9H4R4 102 aa6.85□□□□□ -1.31
NUP54-211ENST00000512151 MBNL3Q9NUK0 354 aaKnown RBP6.85□□□□□ -1.31
NUP54-211ENST00000512151 CALYQ9NYX4 217 aa6.85□□□□□ -1.31
NUP54-211ENST00000512151 IDI2-AS1Q9NZ38 188 aa6.85□□□□□ -1.31
NUP54-211ENST00000512151 ZNF230Q9UIE0 474 aaPredicted RBP6.85□□□□□ -1.31
NUP54-211ENST00000512151 ZNF221Q9UK13 617 aa6.85□□□□□ -1.31
NUP54-211ENST00000512151 TRBV6-6A0A0A6YYG2 114 aa6.84□□□□□ -1.31
NUP54-211ENST00000512151 CENPXA8MT69 81 aa6.84□□□□□ -1.31
NUP54-211ENST00000512151 C15orf65H3BRN8 121 aa6.84□□□□□ -1.31
NUP54-211ENST00000512151 ORC5O43913 435 aa6.84□□□□□ -1.31
NUP54-211ENST00000512151 CA11O75493 328 aa6.84□□□□□ -1.31
NUP54-211ENST00000512151 FCER2P06734 321 aa6.84□□□□□ -1.31
NUP54-211ENST00000512151 FCGR3AP08637 254 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms