RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 APOA2P02652 100 aa6.17□□□□□ -1.42
CPNE4-208ENST00000511604 ATP5G3P48201 142 aa6.17□□□□□ -1.42
CPNE4-208ENST00000511604 DPTQ07507 201 aa6.17□□□□□ -1.42
CPNE4-208ENST00000511604 PSG7Q13046 419 aa6.17□□□□□ -1.42
CPNE4-208ENST00000511604 COX19Q49B96 90 aa6.17□□□□□ -1.42
CPNE4-208ENST00000511604 ADAMTSL5Q6ZMM2 481 aa6.17□□□□□ -1.42
CPNE4-208ENST00000511604 OR10X1Q8NGY0 326 aa6.17□□□□□ -1.42
CPNE4-208ENST00000511604 BAHD1Q8TBE0 780 aaPredicted RBP6.17□□□□□ -1.42
CPNE4-208ENST00000511604 LMX1AQ8TE12 382 aa6.17□□□□□ -1.42
CPNE4-208ENST00000511604 RNF133Q8WVZ7 376 aa6.17□□□□□ -1.42
CPNE4-208ENST00000511604 RAB40CQ96S21 281 aa6.17□□□□□ -1.42
CPNE4-208ENST00000511604 S1PR5Q9H228 398 aa6.17□□□□□ -1.42
CPNE4-208ENST00000511604 TRAV38-1A0A0B4J264 116 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 FBLL1A6NHQ2 334 aaKnown RBP6.16□□□□□ -1.42
CPNE4-208ENST00000511604 HBG1P69891 147 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 HBG2P69892 147 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 ATP5G2Q06055 141 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 EIF3IQ13347 325 aaKnown RBP6.16□□□□□ -1.42
CPNE4-208ENST00000511604 KIR3DS1Q14943 382 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 Q6ZPA2 131 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 STPG3Q8N7X2 389 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 OR10G9Q8NGN4 311 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 OR10G7Q8NGN6 311 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 CCL4L1Q8NHW4 92 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 RAB1CQ92928 201 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 OR4C12Q96R67 309 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 SPAG8Q99932 426 aaPredicted RBP6.16□□□□□ -1.42
CPNE4-208ENST00000511604 PRO3102Q9H379 93 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 C12orf49Q9H741 205 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 SPANXB1Q9NS25 103 aaPredicted RBP6.16□□□□□ -1.42
CPNE4-208ENST00000511604 TIMM9Q9Y5J7 89 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 MED12LQ86YW9 2145 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 A0A0J9YY10 115 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 UBE2L5PA0A1B0GUS4 154 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 A0A1B0GX78 115 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 LIPT2A6NK58 231 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 SHISA8B8ZZ34 492 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 SPINK4O60575 86 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 CA1P00915 261 aaPredicted RBP6.16□□□□□ -1.42
CPNE4-208ENST00000511604 HLA-DQA1P01909 254 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 HBZP02008 142 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 FABP2P12104 132 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 ZNF823P16415 610 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 HERV-K104P61576 105 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 CX3CL1P78423 397 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 FOXE3Q13461 319 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 DOK3Q7L591 496 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 TBC1D26Q86UD7 250 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 BPIFA4PQ86YQ2 179 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 OR10G6Q8NH81 332 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 TM4SF19Q96DZ7 209 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 EMC6Q9BV81 110 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 KCNIP2Q9NS61 270 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 MED29Q9NX70 200 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 C1RLQ9NZP8 487 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 HSPB8Q9UJY1 196 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 ZNF257Q9Y2Q1 563 aa6.16□□□□□ -1.42
CPNE4-208ENST00000511604 OBSL1O75147 1896 aa6.15□□□□□ -1.42
CPNE4-208ENST00000511604 MYO9BQ13459 2157 aa6.15□□□□□ -1.42
CPNE4-208ENST00000511604 ATP5J2P56134 94 aa6.15□□□□□ -1.42
CPNE4-208ENST00000511604 RPL27P61353 136 aaKnown RBP6.15□□□□□ -1.42
CPNE4-208ENST00000511604 PPP1CAP62136 330 aa6.15□□□□□ -1.42
CPNE4-208ENST00000511604 SRSF6Q13247 344 aaKnown RBP6.15□□□□□ -1.42
CPNE4-208ENST00000511604 DEFB110Q30KQ9 67 aa6.15□□□□□ -1.42
CPNE4-208ENST00000511604 ZNF562Q6V9R5 426 aa6.15□□□□□ -1.42
CPNE4-208ENST00000511604 C8orf86Q6ZUL3 223 aa6.15□□□□□ -1.42
CPNE4-208ENST00000511604 CA13Q8N1Q1 262 aa6.15□□□□□ -1.42
CPNE4-208ENST00000511604 TPRX1Q8N7U7 411 aa6.15□□□□□ -1.42
CPNE4-208ENST00000511604 OR5D13Q8NGL4 314 aa6.15□□□□□ -1.42
CPNE4-208ENST00000511604 OR52E5Q8NH55 327 aa6.15□□□□□ -1.42
CPNE4-208ENST00000511604 OR2T6Q8NHC8 308 aa6.15□□□□□ -1.42
CPNE4-208ENST00000511604 C16orf52Q8NHV5 167 aa6.15□□□□□ -1.42
CPNE4-208ENST00000511604 FLVCR1-AS1Q8TAF5 88 aa6.15□□□□□ -1.42
CPNE4-208ENST00000511604 RAB37Q96AX2 223 aa6.15□□□□□ -1.42
CPNE4-208ENST00000511604 CHD7Q9P2D1 2997 aa6.15□□□□□ -1.43
CPNE4-208ENST00000511604 ASCC3Q8N3C0 2202 aaKnown RBP6.15□□□□□ -1.43
CPNE4-208ENST00000511604 ZNF816-ZNF321PA0A0X1KG74 233 aa6.15□□□□□ -1.43
CPNE4-208ENST00000511604 HELTA6NFD8 242 aa6.15□□□□□ -1.43
CPNE4-208ENST00000511604 OTOL1A6NHN0 477 aaPredicted RBP6.15□□□□□ -1.43
CPNE4-208ENST00000511604 H0YGG7 62 aa6.15□□□□□ -1.43
CPNE4-208ENST00000511604 H3BMH7 237 aa6.15□□□□□ -1.43
CPNE4-208ENST00000511604 K7EN84 100 aa6.15□□□□□ -1.43
CPNE4-208ENST00000511604 CCL16O15467 120 aa6.15□□□□□ -1.43
CPNE4-208ENST00000511604 DXOO77932 396 aaKnown RBP6.15□□□□□ -1.43
CPNE4-208ENST00000511604 SPINK8P0C7L1 97 aa6.15□□□□□ -1.43
CPNE4-208ENST00000511604 P2RY2P41231 377 aa6.15□□□□□ -1.43
CPNE4-208ENST00000511604 DLX2Q07687 328 aaPredicted RBP6.15□□□□□ -1.43
CPNE4-208ENST00000511604 MFAP5Q13361 173 aa6.15□□□□□ -1.43
CPNE4-208ENST00000511604 TRIP6Q15654 476 aaKnown RBP6.15□□□□□ -1.43
CPNE4-208ENST00000511604 KISS1Q15726 138 aa6.15□□□□□ -1.43
CPNE4-208ENST00000511604 ZNF585BQ52M93 769 aa6.15□□□□□ -1.43
CPNE4-208ENST00000511604 SLC35E4Q6ICL7 350 aa6.15□□□□□ -1.43
CPNE4-208ENST00000511604 TMEM251Q8N6I4 163 aa6.15□□□□□ -1.43
CPNE4-208ENST00000511604 OR8B12Q8NGG6 310 aa6.15□□□□□ -1.43
CPNE4-208ENST00000511604 HOXB13Q92826 284 aaPredicted RBP6.15□□□□□ -1.43
CPNE4-208ENST00000511604 CLDN23Q96B33 292 aa6.15□□□□□ -1.43
CPNE4-208ENST00000511604 C10orf35Q96D05 121 aa6.15□□□□□ -1.43
CPNE4-208ENST00000511604 C5orf30Q96GV9 206 aa6.15□□□□□ -1.43
CPNE4-208ENST00000511604 RAX2Q96IS3 184 aa6.15□□□□□ -1.43
CPNE4-208ENST00000511604 NDFIP1Q9BT67 221 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms