RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 OR2A7Q96R45 310 aa11.61□□□□□ -0.55
HMGCL-208ENST00000509389 GNG12Q9UBI6 72 aa11.61□□□□□ -0.55
HMGCL-208ENST00000509389 PFDN1O60925 122 aa11.6□□□□□ -0.55
HMGCL-208ENST00000509389 IGLV1-47P01700 117 aa11.6□□□□□ -0.55
HMGCL-208ENST00000509389 OR8U9P0C7N5 309 aa11.6□□□□□ -0.55
HMGCL-208ENST00000509389 UCP1P25874 307 aa11.6□□□□□ -0.55
HMGCL-208ENST00000509389 BRS3P32247 399 aa11.6□□□□□ -0.55
HMGCL-208ENST00000509389 ZNF134P52741 427 aa11.6□□□□□ -0.55
HMGCL-208ENST00000509389 CD300CQ08708 224 aa11.6□□□□□ -0.55
HMGCL-208ENST00000509389 TMEM187Q14656 261 aa11.6□□□□□ -0.55
HMGCL-208ENST00000509389 ANKRD55Q3KP44 614 aa11.6□□□□□ -0.55
HMGCL-208ENST00000509389 ABCA11PQ4W5N1 156 aa11.6□□□□□ -0.55
HMGCL-208ENST00000509389 PHLDA2Q53GA4 152 aa11.6□□□□□ -0.55
HMGCL-208ENST00000509389 TCTEX1D4Q5JR98 221 aa11.6□□□□□ -0.55
HMGCL-208ENST00000509389 SLC25A48Q6ZT89 311 aaKnown RBP11.6□□□□□ -0.55
HMGCL-208ENST00000509389 CENPVQ7Z7K6 275 aaPredicted RBP11.6□□□□□ -0.55
HMGCL-208ENST00000509389 SGPP2Q8IWX5 399 aa11.6□□□□□ -0.55
HMGCL-208ENST00000509389 ODF3L1Q8IXM7 274 aa11.6□□□□□ -0.55
HMGCL-208ENST00000509389 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.6□□□□□ -0.55
HMGCL-208ENST00000509389 OR5M8Q8NGP6 311 aa11.6□□□□□ -0.55
HMGCL-208ENST00000509389 OR8U1Q8NH10 309 aa11.6□□□□□ -0.55
HMGCL-208ENST00000509389 ASB13Q8WXK3 278 aa11.6□□□□□ -0.55
HMGCL-208ENST00000509389 PHB2Q99623 299 aa11.6□□□□□ -0.55
HMGCL-208ENST00000509389 OR2D2Q9H210 308 aa11.6□□□□□ -0.55
HMGCL-208ENST00000509389 FAM212BQ9NTI7 297 aaPredicted RBP11.6□□□□□ -0.55
HMGCL-208ENST00000509389 LEUTXA8MZ59 168 aa11.59□□□□□ -0.55
HMGCL-208ENST00000509389 H0Y980 276 aa11.59□□□□□ -0.55
HMGCL-208ENST00000509389 SSNA1O43805 119 aa11.59□□□□□ -0.55
HMGCL-208ENST00000509389 PROP1O75360 226 aa11.59□□□□□ -0.55
HMGCL-208ENST00000509389 PGLYRP1O75594 196 aaPredicted RBP11.59□□□□□ -0.55
HMGCL-208ENST00000509389 IGLL1P15814 213 aa11.59□□□□□ -0.55
HMGCL-208ENST00000509389 CD33P20138 364 aa11.59□□□□□ -0.55
HMGCL-208ENST00000509389 VAMP1P23763 118 aa11.59□□□□□ -0.55
HMGCL-208ENST00000509389 F2RP25116 425 aa11.59□□□□□ -0.55
HMGCL-208ENST00000509389 RAB7AP51149 207 aa11.59□□□□□ -0.55
HMGCL-208ENST00000509389 ZNF137PP52743 207 aa11.59□□□□□ -0.55
HMGCL-208ENST00000509389 CT45A1Q5HYN5 189 aa11.59□□□□□ -0.55
HMGCL-208ENST00000509389 TBC1D26Q86UD7 250 aa11.59□□□□□ -0.55
HMGCL-208ENST00000509389 CMTM1Q8IZ96 169 aa11.59□□□□□ -0.55
HMGCL-208ENST00000509389 CT45A3Q8NHU0 189 aa11.59□□□□□ -0.55
HMGCL-208ENST00000509389 GLYATL2Q8WU03 294 aa11.59□□□□□ -0.55
HMGCL-208ENST00000509389 TP53RKQ96S44 253 aa11.59□□□□□ -0.55
HMGCL-208ENST00000509389 ZNF251Q9BRH9 671 aa11.59□□□□□ -0.55
HMGCL-208ENST00000509389 SLC25A33Q9BSK2 321 aa11.59□□□□□ -0.55
HMGCL-208ENST00000509389 ABHD14AQ9BUJ0 271 aa11.59□□□□□ -0.55
HMGCL-208ENST00000509389 TCRBV4S1A1TA0A5B7 111 aa11.58□□□□□ -0.56
HMGCL-208ENST00000509389 G3V3Q6 166 aa11.58□□□□□ -0.56
HMGCL-208ENST00000509389 HSD17B6O14756 317 aa11.58□□□□□ -0.56
HMGCL-208ENST00000509389 SLC31A2O15432 143 aa11.58□□□□□ -0.56
HMGCL-208ENST00000509389 ST8SIA5O15466 376 aa11.58□□□□□ -0.56
HMGCL-208ENST00000509389 CCNKO75909 580 aa11.58□□□□□ -0.56
HMGCL-208ENST00000509389 OR2F2O95006 317 aa11.58□□□□□ -0.56
HMGCL-208ENST00000509389 OR5AC1P0C628 307 aa11.58□□□□□ -0.56
HMGCL-208ENST00000509389 ARHGDIBP52566 201 aa11.58□□□□□ -0.56
HMGCL-208ENST00000509389 H2BFSP57053 126 aa11.58□□□□□ -0.56
HMGCL-208ENST00000509389 HLA-DRB5Q30154 266 aa11.58□□□□□ -0.56
HMGCL-208ENST00000509389 TPTE2P1Q5T6R2 138 aa11.58□□□□□ -0.56
HMGCL-208ENST00000509389 COQ8AQ8NI60 647 aa11.58□□□□□ -0.56
HMGCL-208ENST00000509389 TMEM56Q96MV1 263 aa11.58□□□□□ -0.56
HMGCL-208ENST00000509389 RBM14Q96PK6 669 aaKnown RBP11.58□□□□□ -0.56
HMGCL-208ENST00000509389 TMEM222Q9H0R3 208 aa11.58□□□□□ -0.56
HMGCL-208ENST00000509389 SDHAF2Q9NX18 166 aa11.58□□□□□ -0.56
HMGCL-208ENST00000509389 PIPOXQ9P0Z9 390 aa11.58□□□□□ -0.56
HMGCL-208ENST00000509389 TSSC4Q9Y5U2 329 aaPredicted RBP11.58□□□□□ -0.56
HMGCL-208ENST00000509389 TMEM56-RWDD3S4R434 201 aa11.58□□□□□ -0.56
HMGCL-208ENST00000509389 TEX13DA0A0J9YY54 714 aaPredicted RBP11.57□□□□□ -0.56
HMGCL-208ENST00000509389 C3orf85A0A1B0GTC6 90 aa11.57□□□□□ -0.56
HMGCL-208ENST00000509389 DUXBA0A1W2PPF3 345 aa11.57□□□□□ -0.56
HMGCL-208ENST00000509389 SH2D7A6NKC9 451 aaPredicted RBP11.57□□□□□ -0.56
HMGCL-208ENST00000509389 LY6LH3BQJ8 138 aa11.57□□□□□ -0.56
HMGCL-208ENST00000509389 BUB1B-PAK6H3BSN5 160 aa11.57□□□□□ -0.56
HMGCL-208ENST00000509389 TOR1AO14656 332 aa11.57□□□□□ -0.56
HMGCL-208ENST00000509389 AMY1AP04745 511 aa11.57□□□□□ -0.56
HMGCL-208ENST00000509389 GIPP09681 153 aaPredicted RBP11.57□□□□□ -0.56
HMGCL-208ENST00000509389 PF4V1P10720 104 aa11.57□□□□□ -0.56
HMGCL-208ENST00000509389 ANXA3P12429 323 aa11.57□□□□□ -0.56
HMGCL-208ENST00000509389 CEACAM3P40198 252 aa11.57□□□□□ -0.56
HMGCL-208ENST00000509389 PRRX1P54821 245 aa11.57□□□□□ -0.56
HMGCL-208ENST00000509389 SRPXP78539 464 aa11.57□□□□□ -0.56
HMGCL-208ENST00000509389 FAM71F2Q6NXP2 309 aa11.57□□□□□ -0.56
HMGCL-208ENST00000509389 C10orf99Q6UWK7 81 aa11.57□□□□□ -0.56
HMGCL-208ENST00000509389 ZNF66Q6ZN08 573 aa11.57□□□□□ -0.56
HMGCL-208ENST00000509389 TCTEX1D1Q8N7M0 179 aa11.57□□□□□ -0.56
HMGCL-208ENST00000509389 LHFPL5Q8TAF8 219 aa11.57□□□□□ -0.56
HMGCL-208ENST00000509389 IL22RA2Q969J5 263 aa11.57□□□□□ -0.56
HMGCL-208ENST00000509389 RANGRFQ9HD47 186 aaPredicted RBP11.57□□□□□ -0.56
HMGCL-208ENST00000509389 LIN7CQ9NUP9 197 aaKnown RBP11.57□□□□□ -0.56
HMGCL-208ENST00000509389 MGAT4CQ9UBM8 478 aa11.57□□□□□ -0.56
HMGCL-208ENST00000509389 PSG11Q9UQ72 335 aa11.57□□□□□ -0.56
HMGCL-208ENST00000509389 CDS2O95674 445 aa11.56□□□□□ -0.56
HMGCL-208ENST00000509389 S100GP29377 79 aa11.56□□□□□ -0.56
HMGCL-208ENST00000509389 LTC4SQ16873 150 aa11.56□□□□□ -0.56
HMGCL-208ENST00000509389 CASTOR1Q8WTX7 329 aa11.56□□□□□ -0.56
HMGCL-208ENST00000509389 DDB2Q92466 427 aa11.56□□□□□ -0.56
HMGCL-208ENST00000509389 ABHD14BQ96IU4 210 aa11.56□□□□□ -0.56
HMGCL-208ENST00000509389 FYTTD1Q96QD9 318 aaKnown RBP11.56□□□□□ -0.56
HMGCL-208ENST00000509389 HSD17B10Q99714 261 aaKnown RBP11.56□□□□□ -0.56
HMGCL-208ENST00000509389 ZNF436Q9C0F3 470 aaPredicted RBP11.56□□□□□ -0.56
HMGCL-208ENST00000509389 KCNIP3Q9Y2W7 256 aa11.56□□□□□ -0.56
HMGCL-208ENST00000509389 OOSP1A8MZH6 123 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms