RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 HSPA13P48723 471 aa11.95□□□□□ -0.5
CXCL1-202ENST00000509101 TAGLNQ01995 201 aaKnown RBP11.95□□□□□ -0.5
CXCL1-202ENST00000509101 HSD17B12Q53GQ0 312 aa11.95□□□□□ -0.5
CXCL1-202ENST00000509101 IGSF11Q5DX21 431 aa11.95□□□□□ -0.5
CXCL1-202ENST00000509101 ZNF57Q68EA5 555 aaPredicted RBP11.95□□□□□ -0.5
CXCL1-202ENST00000509101 C19orf35Q6ZS72 473 aa11.95□□□□□ -0.5
CXCL1-202ENST00000509101 LYG2Q86SG7 212 aa11.95□□□□□ -0.5
CXCL1-202ENST00000509101 FAM89BQ8N5H3 189 aa11.95□□□□□ -0.5
CXCL1-202ENST00000509101 MND1Q9BWT6 205 aa11.95□□□□□ -0.5
CXCL1-202ENST00000509101 ZNF430Q9H8G1 570 aaPredicted RBP11.95□□□□□ -0.5
CXCL1-202ENST00000509101 MLXQ9UH92 298 aa11.95□□□□□ -0.5
CXCL1-202ENST00000509101 RAB26Q9ULW5 256 aa11.95□□□□□ -0.5
CXCL1-202ENST00000509101 TPRKBQ9Y3C4 175 aa11.95□□□□□ -0.5
CXCL1-202ENST00000509101 ACTL6BO94805 426 aa11.94□□□□□ -0.5
CXCL1-202ENST00000509101 NDUFB8O95169 186 aa11.94□□□□□ -0.5
CXCL1-202ENST00000509101 IGHV3-23P01764 117 aa11.94□□□□□ -0.5
CXCL1-202ENST00000509101 SAA1P0DJI8 122 aaPredicted RBP11.94□□□□□ -0.5
CXCL1-202ENST00000509101 CBLN1P23435 193 aa11.94□□□□□ -0.5
CXCL1-202ENST00000509101 TNFRSF9Q07011 255 aa11.94□□□□□ -0.5
CXCL1-202ENST00000509101 SPHARQ15513 63 aa11.94□□□□□ -0.5
CXCL1-202ENST00000509101 MED22Q15528 200 aa11.94□□□□□ -0.5
CXCL1-202ENST00000509101 TTC9CQ8N5M4 171 aa11.94□□□□□ -0.5
CXCL1-202ENST00000509101 OR10J5Q8NHC4 309 aa11.94□□□□□ -0.5
CXCL1-202ENST00000509101 SPIN2AQ99865 258 aa11.94□□□□□ -0.5
CXCL1-202ENST00000509101 SPIN2BQ9BPZ2 258 aa11.94□□□□□ -0.5
CXCL1-202ENST00000509101 CABLES2Q9BTV7 478 aa11.94□□□□□ -0.5
CXCL1-202ENST00000509101 PLGRKTQ9HBL7 147 aa11.94□□□□□ -0.5
CXCL1-202ENST00000509101 KLK5Q9Y337 293 aaPredicted RBP11.94□□□□□ -0.5
CXCL1-202ENST00000509101 RRP15Q9Y3B9 282 aaKnown RBP11.94□□□□□ -0.5
CXCL1-202ENST00000509101 RBM7Q9Y580 266 aaKnown RBP11.94□□□□□ -0.5
CXCL1-202ENST00000509101 TMEM213A2RRL7 107 aa11.93□□□□□ -0.5
CXCL1-202ENST00000509101 LINC00473A8K010 186 aa11.93□□□□□ -0.5
CXCL1-202ENST00000509101 RGS10O43665 173 aa11.93□□□□□ -0.5
CXCL1-202ENST00000509101 DUTP33316 252 aaKnown RBP11.93□□□□□ -0.5
CXCL1-202ENST00000509101 ARL3P36405 182 aa11.93□□□□□ -0.5
CXCL1-202ENST00000509101 MAP2K4P45985 399 aa11.93□□□□□ -0.5
CXCL1-202ENST00000509101 DEFB135Q30KP9 77 aa11.93□□□□□ -0.5
CXCL1-202ENST00000509101 PLAC9Q5JTB6 97 aa11.93□□□□□ -0.5
CXCL1-202ENST00000509101 FAM209BQ5JX69 171 aa11.93□□□□□ -0.5
CXCL1-202ENST00000509101 BTNL8Q6UX41 500 aa11.93□□□□□ -0.5
CXCL1-202ENST00000509101 MS4A15Q8N5U1 240 aa11.93□□□□□ -0.5
CXCL1-202ENST00000509101 GFI1Q99684 422 aa11.93□□□□□ -0.5
CXCL1-202ENST00000509101 FBXL7Q9UJT9 491 aa11.93□□□□□ -0.5
CXCL1-202ENST00000509101 S4R3C0 116 aa11.93□□□□□ -0.5
CXCL1-202ENST00000509101 KIAA1109Q2LD37 5005 aa11.93□□□□□ -0.5
CXCL1-202ENST00000509101 TRBV6-7A0A0A0MS04 114 aa11.92□□□□□ -0.5
CXCL1-202ENST00000509101 ZNF320A2RRD8 509 aa11.92□□□□□ -0.5
CXCL1-202ENST00000509101 HMX3A6NHT5 357 aa11.92□□□□□ -0.5
CXCL1-202ENST00000509101 CREBL2O60519 120 aaPredicted RBP11.92□□□□□ -0.5
CXCL1-202ENST00000509101 FCGR3AP08637 254 aa11.92□□□□□ -0.5
CXCL1-202ENST00000509101 GSTT2P0CG29 244 aa11.92□□□□□ -0.5
CXCL1-202ENST00000509101 GSTT2BP0CG30 244 aa11.92□□□□□ -0.5
CXCL1-202ENST00000509101 CD37P11049 281 aa11.92□□□□□ -0.5
CXCL1-202ENST00000509101 MRPS15P82914 257 aaKnown RBP11.92□□□□□ -0.5
CXCL1-202ENST00000509101 TPBGQ13641 420 aa11.92□□□□□ -0.5
CXCL1-202ENST00000509101 CDK10Q15131 360 aa11.92□□□□□ -0.5
CXCL1-202ENST00000509101 TM4SF20Q53R12 229 aa11.92□□□□□ -0.5
CXCL1-202ENST00000509101 GPHB5Q86YW7 130 aa11.92□□□□□ -0.5
CXCL1-202ENST00000509101 WFDC3Q8IUB2 231 aa11.92□□□□□ -0.5
CXCL1-202ENST00000509101 MMD2Q8IY49 270 aa11.92□□□□□ -0.5
CXCL1-202ENST00000509101 UXS1Q8NBZ7 420 aa11.92□□□□□ -0.5
CXCL1-202ENST00000509101 OSR1Q8TAX0 266 aaPredicted RBP11.92□□□□□ -0.5
CXCL1-202ENST00000509101 MAFIPQ8WZ33 124 aa11.92□□□□□ -0.5
CXCL1-202ENST00000509101 ADTRPQ96IZ2 230 aa11.92□□□□□ -0.5
CXCL1-202ENST00000509101 CCDC140Q96MF4 163 aa11.92□□□□□ -0.5
CXCL1-202ENST00000509101 CCDC90BQ9GZT6 254 aa11.92□□□□□ -0.5
CXCL1-202ENST00000509101 ZNF257Q9Y2Q1 563 aa11.92□□□□□ -0.5
CXCL1-202ENST00000509101 A8MWP6 167 aa11.91□□□□□ -0.5
CXCL1-202ENST00000509101 SLC17A2O00624 439 aa11.91□□□□□ -0.5
CXCL1-202ENST00000509101 SPRY2O43597 315 aa11.91□□□□□ -0.5
CXCL1-202ENST00000509101 UCHL1P09936 223 aa11.91□□□□□ -0.5
CXCL1-202ENST00000509101 BMI1P35226 326 aa11.91□□□□□ -0.5
CXCL1-202ENST00000509101 CLDN12P56749 244 aa11.91□□□□□ -0.5
CXCL1-202ENST00000509101 RAB11BQ15907 218 aa11.91□□□□□ -0.5
CXCL1-202ENST00000509101 ANKRD55Q3KP44 614 aa11.91□□□□□ -0.5
CXCL1-202ENST00000509101 LIPKQ5VXJ0 399 aa11.91□□□□□ -0.5
CXCL1-202ENST00000509101 CLEC19AQ6UXS0 136 aa11.91□□□□□ -0.5
CXCL1-202ENST00000509101 PRSS48Q7RTY5 328 aa11.91□□□□□ -0.5
CXCL1-202ENST00000509101 SLC25A42Q86VD7 318 aa11.91□□□□□ -0.5
CXCL1-202ENST00000509101 OR56B1Q8NGI3 324 aa11.91□□□□□ -0.5
CXCL1-202ENST00000509101 GINS4Q9BRT9 223 aa11.91□□□□□ -0.5
CXCL1-202ENST00000509101 TP53TG1Q9Y2A0 90 aa11.91□□□□□ -0.5
CXCL1-202ENST00000509101 TEX22C9J3V5 150 aa11.9□□□□□ -0.5
CXCL1-202ENST00000509101 OR1L6Q8NGR2 347 aa11.9□□□□□ -0.5
CXCL1-202ENST00000509101 DCUN1D5Q9BTE7 237 aa11.9□□□□□ -0.5
CXCL1-202ENST00000509101 AK6Q9Y3D8 172 aaKnown RBP11.9□□□□□ -0.5
CXCL1-202ENST00000509101 DNAH6Q9C0G6 4158 aa11.9□□□□□ -0.5
CXCL1-202ENST00000509101 VPS13DQ5THJ4 4388 aa11.9□□□□□ -0.51
CXCL1-202ENST00000509101 DPPA5A6NC42 116 aa11.89□□□□□ -0.51
CXCL1-202ENST00000509101 DENRO43583 198 aaKnown RBP11.89□□□□□ -0.51
CXCL1-202ENST00000509101 FCGR3BO75015 233 aa11.89□□□□□ -0.51
CXCL1-202ENST00000509101 HSMCR30P0CW71 290 aa11.89□□□□□ -0.51
CXCL1-202ENST00000509101 APOC4P55056 127 aa11.89□□□□□ -0.51
CXCL1-202ENST00000509101 RPS25P62851 125 aaKnown RBP11.89□□□□□ -0.51
CXCL1-202ENST00000509101 PLA2G7Q13093 441 aa11.89□□□□□ -0.51
CXCL1-202ENST00000509101 FAM106AQ4KMX7 169 aa11.89□□□□□ -0.51
CXCL1-202ENST00000509101 OR2B11Q5JQS5 317 aa11.89□□□□□ -0.51
CXCL1-202ENST00000509101 Q6ZWC4 215 aa11.89□□□□□ -0.51
CXCL1-202ENST00000509101 TMEM203Q969S6 136 aa11.89□□□□□ -0.51
CXCL1-202ENST00000509101 UBQLN2Q9UHD9 624 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms