RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 OR4A5Q8NH83 315 aa8.42□□□□□ -1.06
PDGFRA-207ENST00000509092 OR1L1Q8NH94 360 aa8.42□□□□□ -1.06
PDGFRA-207ENST00000509092 OR1F12Q8NHA8 337 aa8.42□□□□□ -1.06
PDGFRA-207ENST00000509092 ZNF835Q9Y2P0 537 aa8.42□□□□□ -1.06
PDGFRA-207ENST00000509092 IGKV1-12A0A0C4DH73 117 aa8.42□□□□□ -1.06
PDGFRA-207ENST00000509092 A0A0J9YY10 115 aa8.42□□□□□ -1.06
PDGFRA-207ENST00000509092 CLDN1O95832 211 aa8.42□□□□□ -1.06
PDGFRA-207ENST00000509092 IGKV1-5P01602 117 aa8.42□□□□□ -1.06
PDGFRA-207ENST00000509092 IGKV1D-12P01611 117 aa8.42□□□□□ -1.06
PDGFRA-207ENST00000509092 SCTP09683 121 aa8.42□□□□□ -1.06
PDGFRA-207ENST00000509092 ADH5P11766 374 aa8.42□□□□□ -1.06
PDGFRA-207ENST00000509092 DRD3P35462 400 aa8.42□□□□□ -1.06
PDGFRA-207ENST00000509092 RBM11P57052 281 aaKnown RBP8.42□□□□□ -1.06
PDGFRA-207ENST00000509092 KLF5Q13887 457 aaPredicted RBP8.42□□□□□ -1.06
PDGFRA-207ENST00000509092 CD300EQ496F6 205 aaPredicted RBP8.42□□□□□ -1.06
PDGFRA-207ENST00000509092 CT55Q8WUE5 264 aa8.42□□□□□ -1.06
PDGFRA-207ENST00000509092 NUDT22Q9BRQ3 303 aa8.42□□□□□ -1.06
PDGFRA-207ENST00000509092 TMEM204Q9BSN7 226 aa8.42□□□□□ -1.06
PDGFRA-207ENST00000509092 MS4A6AQ9H2W1 248 aa8.42□□□□□ -1.06
PDGFRA-207ENST00000509092 F2RL2O00254 374 aa8.41□□□□□ -1.06
PDGFRA-207ENST00000509092 HTR1DP28221 377 aa8.41□□□□□ -1.06
PDGFRA-207ENST00000509092 PDCD1Q15116 288 aa8.41□□□□□ -1.06
PDGFRA-207ENST00000509092 VWC2Q2TAL6 325 aa8.41□□□□□ -1.06
PDGFRA-207ENST00000509092 KIR3DL3Q8N743 410 aa8.41□□□□□ -1.06
PDGFRA-207ENST00000509092 PMCHL2Q9BQD1 86 aa8.41□□□□□ -1.06
PDGFRA-207ENST00000509092 COL5A1P20908 1838 aaPredicted RBP8.41□□□□□ -1.06
PDGFRA-207ENST00000509092 TRGV10A0A0A0MS01 117 aa8.41□□□□□ -1.06
PDGFRA-207ENST00000509092 TMEM189A5PLL7 270 aa8.41□□□□□ -1.06
PDGFRA-207ENST00000509092 A6NDN8 102 aa8.41□□□□□ -1.06
PDGFRA-207ENST00000509092 F5H5K5 113 aa8.41□□□□□ -1.06
PDGFRA-207ENST00000509092 FTH1P19P0C7X4 201 aa8.41□□□□□ -1.06
PDGFRA-207ENST00000509092 RAC3P60763 192 aa8.41□□□□□ -1.06
PDGFRA-207ENST00000509092 SLAQ13239 276 aa8.41□□□□□ -1.06
PDGFRA-207ENST00000509092 TMEM97Q5BJF2 176 aa8.41□□□□□ -1.06
PDGFRA-207ENST00000509092 CCDC144NLQ6NUI1 221 aa8.41□□□□□ -1.06
PDGFRA-207ENST00000509092 MRPL21Q7Z2W9 205 aaKnown RBP8.41□□□□□ -1.06
PDGFRA-207ENST00000509092 OR10AG1Q8NH19 301 aa8.41□□□□□ -1.06
PDGFRA-207ENST00000509092 C11orf52Q96A22 123 aa8.41□□□□□ -1.06
PDGFRA-207ENST00000509092 BORCS8Q96FH0 119 aa8.41□□□□□ -1.06
PDGFRA-207ENST00000509092 MRAP2Q96G30 205 aa8.41□□□□□ -1.06
PDGFRA-207ENST00000509092 FER1L6-AS2Q96M78 137 aa8.41□□□□□ -1.06
PDGFRA-207ENST00000509092 FGF22Q9HCT0 170 aa8.41□□□□□ -1.06
PDGFRA-207ENST00000509092 TNFRSF19Q9NS68 423 aa8.41□□□□□ -1.06
PDGFRA-207ENST00000509092 HCFC1R1Q9NWW0 138 aa8.41□□□□□ -1.06
PDGFRA-207ENST00000509092 ALKBH4Q9NXW9 302 aa8.41□□□□□ -1.06
PDGFRA-207ENST00000509092 TRIOBPQ9H2D6 2365 aa8.4□□□□□ -1.06
PDGFRA-207ENST00000509092 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.4□□□□□ -1.06
PDGFRA-207ENST00000509092 TRAV38-1A0A0B4J264 116 aa8.4□□□□□ -1.06
PDGFRA-207ENST00000509092 A0A1W2PPV4 95 aa8.4□□□□□ -1.06
PDGFRA-207ENST00000509092 GAGE12HA6NDE8 117 aa8.4□□□□□ -1.06
PDGFRA-207ENST00000509092 PMS2P5A8MQ11 134 aa8.4□□□□□ -1.06
PDGFRA-207ENST00000509092 H3BUT2 72 aa8.4□□□□□ -1.06
PDGFRA-207ENST00000509092 CA3P07451 260 aa8.4□□□□□ -1.06
PDGFRA-207ENST00000509092 ZNF718Q3SXZ3 478 aa8.4□□□□□ -1.06
PDGFRA-207ENST00000509092 RNASEKQ6P5S7 137 aaKnown RBP8.4□□□□□ -1.06
PDGFRA-207ENST00000509092 MTURNQ8N3F0 131 aa8.4□□□□□ -1.06
PDGFRA-207ENST00000509092 OR2Z1Q8NG97 314 aa8.4□□□□□ -1.06
PDGFRA-207ENST00000509092 PHF7Q9BWX1 381 aaPredicted RBP8.4□□□□□ -1.06
PDGFRA-207ENST00000509092 TMEM191AQ9H0A3 160 aa8.4□□□□□ -1.06
PDGFRA-207ENST00000509092 SAP30LQ9HAJ7 183 aa8.4□□□□□ -1.06
PDGFRA-207ENST00000509092 KIR2DS1A0A191URI9 304 aa8.4□□□□□ -1.07
PDGFRA-207ENST00000509092 TEX48A0A1B0GUV7 120 aa8.4□□□□□ -1.07
PDGFRA-207ENST00000509092 PRSS38A1L453 326 aa8.4□□□□□ -1.07
PDGFRA-207ENST00000509092 K7EQM0 130 aa8.4□□□□□ -1.07
PDGFRA-207ENST00000509092 RHBDL1O75783 438 aa8.4□□□□□ -1.07
PDGFRA-207ENST00000509092 OR7C1O76099 320 aaPredicted RBP8.4□□□□□ -1.07
PDGFRA-207ENST00000509092 ARL14EPLP0DKL9 152 aa8.4□□□□□ -1.07
PDGFRA-207ENST00000509092 USF1P22415 310 aaPredicted RBP8.4□□□□□ -1.07
PDGFRA-207ENST00000509092 KIR2DS4P43632 304 aa8.4□□□□□ -1.07
PDGFRA-207ENST00000509092 RPL31P62899 125 aaKnown RBP8.4□□□□□ -1.07
PDGFRA-207ENST00000509092 KIR2DS1Q14954 304 aa8.4□□□□□ -1.07
PDGFRA-207ENST00000509092 SLC35E4Q6ICL7 350 aa8.4□□□□□ -1.07
PDGFRA-207ENST00000509092 VSTM2AQ8TAG5 236 aa8.4□□□□□ -1.07
PDGFRA-207ENST00000509092 ZNF479Q96JC4 524 aa8.4□□□□□ -1.07
PDGFRA-207ENST00000509092 SPATA25Q9BR10 227 aa8.4□□□□□ -1.07
PDGFRA-207ENST00000509092 OR2D2Q9H210 308 aa8.4□□□□□ -1.07
PDGFRA-207ENST00000509092 OSTCQ9NRP0 149 aa8.4□□□□□ -1.07
PDGFRA-207ENST00000509092 TECRQ9NZ01 308 aaKnown RBP8.4□□□□□ -1.07
PDGFRA-207ENST00000509092 IGKV1-6A0A0C4DH72 117 aa8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 A0A0G2JLM5 398 aa8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 SYS1-DBNDD2H3BUS1 97 aa8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 CCL16O15467 120 aa8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 CXorf1O96002 111 aa8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 HIST1H1EP10412 219 aaKnown RBP8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 SLC35B1P78383 322 aa8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 RPL24P83731 157 aaKnown RBP8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 DEFB110Q30KQ9 67 aa8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 FAM120AOSQ5T036 256 aa8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 C2orf91Q6ZV80 131 aa8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 OR2T6Q8NHC8 308 aa8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 GEMIN7Q9H840 131 aaKnown RBP8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 WDR54Q9H977 334 aa8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 C19orf25Q9UFG5 118 aaPredicted RBP8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 PPP1R3CQ9UQK1 317 aa8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 TSSC4Q9Y5U2 329 aaPredicted RBP8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 SMIM27A0A1W2PRY6 76 aa8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 PLCXD2Q0VAA5 305 aa8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 DAZAP2Q15038 168 aaPredicted RBP8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 FAM162BQ5T6X4 162 aa8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 CARD17Q5XLA6 110 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms