RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 SLC25A6P12236 298 aa8.36□□□□□ -1.07
RFC1-211ENST00000509084 CD99P14209 185 aa8.36□□□□□ -1.07
RFC1-211ENST00000509084 LINC00205P59089 165 aa8.36□□□□□ -1.07
RFC1-211ENST00000509084 RPS16P62249 146 aaKnown RBP8.36□□□□□ -1.07
RFC1-211ENST00000509084 CYCSP99999 105 aaKnown RBP8.36□□□□□ -1.07
RFC1-211ENST00000509084 VMA21Q3ZAQ7 101 aa8.36□□□□□ -1.07
RFC1-211ENST00000509084 NMSQ5H8A3 153 aa8.36□□□□□ -1.07
RFC1-211ENST00000509084 GGNBP1Q5YKI7 109 aa8.36□□□□□ -1.07
RFC1-211ENST00000509084 H2BFWTQ7Z2G1 175 aa8.36□□□□□ -1.07
RFC1-211ENST00000509084 LYZL2Q7Z4W2 148 aa8.36□□□□□ -1.07
RFC1-211ENST00000509084 AKAP14Q86UN6 197 aa8.36□□□□□ -1.07
RFC1-211ENST00000509084 THNSL2Q86YJ6 484 aa8.36□□□□□ -1.07
RFC1-211ENST00000509084 OR11H7Q8NGC8 314 aa8.36□□□□□ -1.07
RFC1-211ENST00000509084 SEC22AQ96IW7 307 aa8.36□□□□□ -1.07
RFC1-211ENST00000509084 RHOVQ96L33 236 aa8.36□□□□□ -1.07
RFC1-211ENST00000509084 YAE1D1Q9NRH1 226 aa8.36□□□□□ -1.07
RFC1-211ENST00000509084 ZFP57Q9NU63 452 aa8.36□□□□□ -1.07
RFC1-211ENST00000509084 IGHV3-72A0A0B4J1Y9 119 aa8.35□□□□□ -1.07
RFC1-211ENST00000509084 A0A0U1RQK1 487 aa8.35□□□□□ -1.07
RFC1-211ENST00000509084 A0A1B0GU03 582 aa8.35□□□□□ -1.07
RFC1-211ENST00000509084 FAM25EA8MYX2 175 aa8.35□□□□□ -1.07
RFC1-211ENST00000509084 ADAP1O75689 374 aa8.35□□□□□ -1.07
RFC1-211ENST00000509084 KRASP01116 189 aa8.35□□□□□ -1.07
RFC1-211ENST00000509084 IGKV1-16P04430 117 aa8.35□□□□□ -1.07
RFC1-211ENST00000509084 FGF2P09038 288 aa8.35□□□□□ -1.07
RFC1-211ENST00000509084 FAM106CPP0CH98 169 aa8.35□□□□□ -1.07
RFC1-211ENST00000509084 G6PCP35575 357 aa8.35□□□□□ -1.07
RFC1-211ENST00000509084 SRP14P37108 136 aaKnown RBP8.35□□□□□ -1.07
RFC1-211ENST00000509084 RAP2BP61225 183 aa8.35□□□□□ -1.07
RFC1-211ENST00000509084 EBI3Q14213 229 aa8.35□□□□□ -1.07
RFC1-211ENST00000509084 HES1Q14469 280 aa8.35□□□□□ -1.07
RFC1-211ENST00000509084 IAH1Q2TAA2 248 aaPredicted RBP8.35□□□□□ -1.07
RFC1-211ENST00000509084 LRRC75BQ2VPJ9 315 aa8.35□□□□□ -1.07
RFC1-211ENST00000509084 OR8H1Q8NGG4 311 aa8.35□□□□□ -1.07
RFC1-211ENST00000509084 OR4A5Q8NH83 315 aa8.35□□□□□ -1.07
RFC1-211ENST00000509084 AJUBAQ96IF1 538 aa8.35□□□□□ -1.07
RFC1-211ENST00000509084 C2orf50Q96LR7 162 aa8.35□□□□□ -1.07
RFC1-211ENST00000509084 NMES1Q9C002 83 aa8.35□□□□□ -1.07
RFC1-211ENST00000509084 ZNF436Q9C0F3 470 aaPredicted RBP8.35□□□□□ -1.07
RFC1-211ENST00000509084 RANBP3Q9H6Z4 567 aaPredicted RBP8.35□□□□□ -1.07
RFC1-211ENST00000509084 COA4Q9NYJ1 87 aa8.35□□□□□ -1.07
RFC1-211ENST00000509084 BET1LQ9NYM9 111 aa8.35□□□□□ -1.07
RFC1-211ENST00000509084 CSMD2Q7Z408 3487 aa8.34□□□□□ -1.07
RFC1-211ENST00000509084 C13orf42A0A1B0GVH6 325 aa8.34□□□□□ -1.07
RFC1-211ENST00000509084 CCSO14618 274 aa8.34□□□□□ -1.07
RFC1-211ENST00000509084 PFDN1O60925 122 aa8.34□□□□□ -1.07
RFC1-211ENST00000509084 CCNKO75909 580 aa8.34□□□□□ -1.07
RFC1-211ENST00000509084 SNAPC5O75971 98 aa8.34□□□□□ -1.07
RFC1-211ENST00000509084 OR2A4O95047 310 aa8.34□□□□□ -1.07
RFC1-211ENST00000509084 IGKV1D-33P01593 117 aa8.34□□□□□ -1.07
RFC1-211ENST00000509084 IGKV1-33P01594 117 aa8.34□□□□□ -1.07
RFC1-211ENST00000509084 IGKV1-5P01602 117 aa8.34□□□□□ -1.07
RFC1-211ENST00000509084 SNRNP70P08621 437 aaKnown RBP8.34□□□□□ -1.07
RFC1-211ENST00000509084 P0C879 139 aa8.34□□□□□ -1.07
RFC1-211ENST00000509084 UBE2KP61086 200 aa8.34□□□□□ -1.07
RFC1-211ENST00000509084 SRSF4Q08170 494 aaKnown RBP8.34□□□□□ -1.07
RFC1-211ENST00000509084 SMCO1Q147U7 214 aa8.34□□□□□ -1.07
RFC1-211ENST00000509084 FAM120AOSQ5T036 256 aa8.34□□□□□ -1.07
RFC1-211ENST00000509084 FOXRED2Q8IWF2 684 aa8.34□□□□□ -1.07
RFC1-211ENST00000509084 DYNAPQ8N1N2 210 aa8.34□□□□□ -1.07
RFC1-211ENST00000509084 TEX45Q8NA69 505 aa8.34□□□□□ -1.07
RFC1-211ENST00000509084 C17orf50Q8WW18 174 aa8.34□□□□□ -1.07
RFC1-211ENST00000509084 OR2A7Q96R45 310 aa8.34□□□□□ -1.07
RFC1-211ENST00000509084 TMEM140Q9NV12 185 aa8.34□□□□□ -1.07
RFC1-211ENST00000509084 C1RLQ9NZP8 487 aa8.34□□□□□ -1.07
RFC1-211ENST00000509084 KIAA1456Q9P272 454 aa8.34□□□□□ -1.07
RFC1-211ENST00000509084 PITPNC1Q9UKF7 332 aa8.34□□□□□ -1.07
RFC1-211ENST00000509084 WNK2Q9Y3S1 2297 aa8.34□□□□□ -1.07
RFC1-211ENST00000509084 BTBD17A6NE02 478 aa8.33□□□□□ -1.08
RFC1-211ENST00000509084 FAM90A26D6RGX4 464 aa8.33□□□□□ -1.08
RFC1-211ENST00000509084 KBTBD11O94819 623 aa8.33□□□□□ -1.08
RFC1-211ENST00000509084 NDUFA3O95167 84 aa8.33□□□□□ -1.08
RFC1-211ENST00000509084 PET100P0DJ07 73 aa8.33□□□□□ -1.08
RFC1-211ENST00000509084 SAA1P0DJI8 122 aaPredicted RBP8.33□□□□□ -1.08
RFC1-211ENST00000509084 TMEM11P17152 192 aa8.33□□□□□ -1.08
RFC1-211ENST00000509084 CXCL3P19876 107 aa8.33□□□□□ -1.08
RFC1-211ENST00000509084 CD83Q01151 205 aa8.33□□□□□ -1.08
RFC1-211ENST00000509084 FGL1Q08830 312 aa8.33□□□□□ -1.08
RFC1-211ENST00000509084 MMDQ15546 238 aa8.33□□□□□ -1.08
RFC1-211ENST00000509084 C2orf68Q2NKX9 166 aa8.33□□□□□ -1.08
RFC1-211ENST00000509084 OR4A47Q6IF82 309 aa8.33□□□□□ -1.08
RFC1-211ENST00000509084 PUSL1Q8N0Z8 303 aaKnown RBP8.33□□□□□ -1.08
RFC1-211ENST00000509084 ZBTB8BQ8NAP8 495 aaPredicted RBP8.33□□□□□ -1.08
RFC1-211ENST00000509084 OR4A16Q8NH70 328 aa8.33□□□□□ -1.08
RFC1-211ENST00000509084 OR5R1Q8NH85 324 aa8.33□□□□□ -1.08
RFC1-211ENST00000509084 OR1S1Q8NH92 325 aa8.33□□□□□ -1.08
RFC1-211ENST00000509084 GPR146Q96CH1 333 aa8.33□□□□□ -1.08
RFC1-211ENST00000509084 EAF1Q96JC9 268 aaPredicted RBP8.33□□□□□ -1.08
RFC1-211ENST00000509084 FKBP11Q9NYL4 201 aa8.33□□□□□ -1.08
RFC1-211ENST00000509084 CACNG5Q9UF02 275 aa8.33□□□□□ -1.08
RFC1-211ENST00000509084 PRNDQ9UKY0 176 aa8.33□□□□□ -1.08
RFC1-211ENST00000509084 ITPR2Q14571 2701 aa8.33□□□□□ -1.08
RFC1-211ENST00000509084 MED13LQ71F56 2210 aa8.32□□□□□ -1.08
RFC1-211ENST00000509084 NBPF19A0A087WUL8 3843 aa8.32□□□□□ -1.08
RFC1-211ENST00000509084 A0A0G2JRQ6 117 aa8.32□□□□□ -1.08
RFC1-211ENST00000509084 RRHO14718 337 aa8.32□□□□□ -1.08
RFC1-211ENST00000509084 NBR2O15453 112 aa8.32□□□□□ -1.08
RFC1-211ENST00000509084 RBMXL2O75526 392 aaKnown RBP8.32□□□□□ -1.08
RFC1-211ENST00000509084 SIX6O95475 246 aa8.32□□□□□ -1.08
RFC1-211ENST00000509084 IGLV2-23P01705 113 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms