RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 SNAPC3Q92966 411 aa8.77□□□□□ -1.01
HMGCS1-204ENST00000507293 ZNF430Q9H8G1 570 aaPredicted RBP8.77□□□□□ -1.01
HMGCS1-204ENST00000507293 AKIP1Q9NQ31 210 aa8.77□□□□□ -1.01
HMGCS1-204ENST00000507293 SIGLEC8Q9NYZ4 499 aa8.77□□□□□ -1.01
HMGCS1-204ENST00000507293 RYR2Q92736 4967 aa8.77□□□□□ -1.01
HMGCS1-204ENST00000507293 TENM2Q9NT68 2774 aa8.76□□□□□ -1.01
HMGCS1-204ENST00000507293 FAM223BA6NKX1 122 aa8.76□□□□□ -1.01
HMGCS1-204ENST00000507293 BMPR1BO00238 502 aa8.76□□□□□ -1.01
HMGCS1-204ENST00000507293 CREBL2O60519 120 aaPredicted RBP8.76□□□□□ -1.01
HMGCS1-204ENST00000507293 ACTL6BO94805 426 aa8.76□□□□□ -1.01
HMGCS1-204ENST00000507293 DTYMKP23919 212 aa8.76□□□□□ -1.01
HMGCS1-204ENST00000507293 ATP5G2Q06055 141 aa8.76□□□□□ -1.01
HMGCS1-204ENST00000507293 CDK10Q15131 360 aa8.76□□□□□ -1.01
HMGCS1-204ENST00000507293 C22orf42Q6IC83 251 aa8.76□□□□□ -1.01
HMGCS1-204ENST00000507293 KCTD9Q7L273 389 aa8.76□□□□□ -1.01
HMGCS1-204ENST00000507293 FAM223AQ8IWN6 122 aa8.76□□□□□ -1.01
HMGCS1-204ENST00000507293 ZNF645Q8N7E2 425 aa8.76□□□□□ -1.01
HMGCS1-204ENST00000507293 DCUN1D5Q9BTE7 237 aa8.76□□□□□ -1.01
HMGCS1-204ENST00000507293 CENPOQ9BU64 300 aa8.76□□□□□ -1.01
HMGCS1-204ENST00000507293 ST6GALNAC5Q9BVH7 336 aa8.76□□□□□ -1.01
HMGCS1-204ENST00000507293 TUBA4BQ9H853 241 aa8.76□□□□□ -1.01
HMGCS1-204ENST00000507293 PEMTQ9UBM1 199 aa8.76□□□□□ -1.01
HMGCS1-204ENST00000507293 BLOC1S6Q9UL45 172 aa8.76□□□□□ -1.01
HMGCS1-204ENST00000507293 TRBV9A0A0B4J1U6 114 aa8.75□□□□□ -1.01
HMGCS1-204ENST00000507293 TUSC2O75896 110 aa8.75□□□□□ -1.01
HMGCS1-204ENST00000507293 NFYAP23511 347 aaPredicted RBP8.75□□□□□ -1.01
HMGCS1-204ENST00000507293 MECP2P51608 486 aaKnown RBP8.75□□□□□ -1.01
HMGCS1-204ENST00000507293 RPL30P62888 115 aaKnown RBP8.75□□□□□ -1.01
HMGCS1-204ENST00000507293 ARL6IP1Q15041 203 aa8.75□□□□□ -1.01
HMGCS1-204ENST00000507293 CDNFQ49AH0 187 aa8.75□□□□□ -1.01
HMGCS1-204ENST00000507293 ADAMTSL5Q6ZMM2 481 aa8.75□□□□□ -1.01
HMGCS1-204ENST00000507293 MMD2Q8IY49 270 aa8.75□□□□□ -1.01
HMGCS1-204ENST00000507293 NUDCD2Q8WVJ2 157 aa8.75□□□□□ -1.01
HMGCS1-204ENST00000507293 SPIN2AQ99865 258 aa8.75□□□□□ -1.01
HMGCS1-204ENST00000507293 SPIN2BQ9BPZ2 258 aa8.75□□□□□ -1.01
HMGCS1-204ENST00000507293 Q9H521 79 aa8.75□□□□□ -1.01
HMGCS1-204ENST00000507293 PLEKHA3Q9HB20 300 aa8.75□□□□□ -1.01
HMGCS1-204ENST00000507293 RETNQ9HD89 108 aa8.75□□□□□ -1.01
HMGCS1-204ENST00000507293 RAB26Q9ULW5 256 aa8.75□□□□□ -1.01
HMGCS1-204ENST00000507293 MRPS7Q9Y2R9 242 aaKnown RBP8.75□□□□□ -1.01
HMGCS1-204ENST00000507293 RBMX2Q9Y388 322 aaKnown RBP8.75□□□□□ -1.01
HMGCS1-204ENST00000507293 OR2W1Q9Y3N9 320 aa8.75□□□□□ -1.01
HMGCS1-204ENST00000507293 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.74□□□□□ -1.01
HMGCS1-204ENST00000507293 IGKV1D-13A0A0B4J2D9 117 aa8.74□□□□□ -1.01
HMGCS1-204ENST00000507293 TMEM235A6NFC5 223 aa8.74□□□□□ -1.01
HMGCS1-204ENST00000507293 HMX3A6NHT5 357 aa8.74□□□□□ -1.01
HMGCS1-204ENST00000507293 AIREO43918 545 aa8.74□□□□□ -1.01
HMGCS1-204ENST00000507293 OR2J3O76001 311 aa8.74□□□□□ -1.01
HMGCS1-204ENST00000507293 IGLV2-14P01704 120 aa8.74□□□□□ -1.01
HMGCS1-204ENST00000507293 HLA-DQB1P01920 261 aa8.74□□□□□ -1.01
HMGCS1-204ENST00000507293 IGKV1-13P0DP09 117 aa8.74□□□□□ -1.01
HMGCS1-204ENST00000507293 CD36P16671 472 aa8.74□□□□□ -1.01
HMGCS1-204ENST00000507293 GALP22466 123 aa8.74□□□□□ -1.01
HMGCS1-204ENST00000507293 CD81P60033 236 aa8.74□□□□□ -1.01
HMGCS1-204ENST00000507293 CD300EQ496F6 205 aaPredicted RBP8.74□□□□□ -1.01
HMGCS1-204ENST00000507293 HACD4Q5VWC8 232 aa8.74□□□□□ -1.01
HMGCS1-204ENST00000507293 VKORC1L1Q8N0U8 176 aa8.74□□□□□ -1.01
HMGCS1-204ENST00000507293 TTC9CQ8N5M4 171 aa8.74□□□□□ -1.01
HMGCS1-204ENST00000507293 NECAP1Q8NC96 275 aa8.74□□□□□ -1.01
HMGCS1-204ENST00000507293 OR2K2Q8NGT1 345 aa8.74□□□□□ -1.01
HMGCS1-204ENST00000507293 DYNLRB2Q8TF09 96 aa8.74□□□□□ -1.01
HMGCS1-204ENST00000507293 PRELID3BQ9Y3B1 194 aa8.74□□□□□ -1.01
HMGCS1-204ENST00000507293 SACSQ9NZJ4 4579 aa8.74□□□□□ -1.01
HMGCS1-204ENST00000507293 NOTOA8MTQ0 251 aa8.73□□□□□ -1.01
HMGCS1-204ENST00000507293 PPP5D1E7EU14 171 aa8.73□□□□□ -1.01
HMGCS1-204ENST00000507293 TPPPO94811 219 aa8.73□□□□□ -1.01
HMGCS1-204ENST00000507293 KBTBD11O94819 623 aa8.73□□□□□ -1.01
HMGCS1-204ENST00000507293 IFNA6P05013 189 aa8.73□□□□□ -1.01
HMGCS1-204ENST00000507293 CTXN2P0C2S0 81 aa8.73□□□□□ -1.01
HMGCS1-204ENST00000507293 EDN2P20800 178 aa8.73□□□□□ -1.01
HMGCS1-204ENST00000507293 GNG2P59768 71 aa8.73□□□□□ -1.01
HMGCS1-204ENST00000507293 C15orf32Q32M92 178 aa8.73□□□□□ -1.01
HMGCS1-204ENST00000507293 CNIH2Q6PI25 160 aa8.73□□□□□ -1.01
HMGCS1-204ENST00000507293 C19orf35Q6ZS72 473 aa8.73□□□□□ -1.01
HMGCS1-204ENST00000507293 SLC25A42Q86VD7 318 aa8.73□□□□□ -1.01
HMGCS1-204ENST00000507293 OR4S2Q8NH73 311 aa8.73□□□□□ -1.01
HMGCS1-204ENST00000507293 TCTEX1D2Q8WW35 142 aa8.73□□□□□ -1.01
HMGCS1-204ENST00000507293 NEURL2Q9BR09 285 aa8.73□□□□□ -1.01
HMGCS1-204ENST00000507293 OR51E2Q9H255 320 aa8.73□□□□□ -1.01
HMGCS1-204ENST00000507293 DCSTAMPQ9H295 470 aa8.73□□□□□ -1.01
HMGCS1-204ENST00000507293 ZNF257Q9Y2Q1 563 aa8.73□□□□□ -1.01
HMGCS1-204ENST00000507293 CEPT1Q9Y6K0 416 aa8.73□□□□□ -1.01
HMGCS1-204ENST00000507293 DNAH7Q8WXX0 4024 aa8.72□□□□□ -1.01
HMGCS1-204ENST00000507293 TEX22C9J3V5 150 aa8.72□□□□□ -1.01
HMGCS1-204ENST00000507293 SSX5O60225 188 aa8.72□□□□□ -1.01
HMGCS1-204ENST00000507293 SLC22A5O76082 557 aa8.72□□□□□ -1.01
HMGCS1-204ENST00000507293 IGHV3-23P01764 117 aa8.72□□□□□ -1.01
HMGCS1-204ENST00000507293 HLA-AP01891 365 aaKnown RBP8.72□□□□□ -1.01
HMGCS1-204ENST00000507293 CD7P09564 240 aa8.72□□□□□ -1.01
HMGCS1-204ENST00000507293 PSMB9P28065 219 aa8.72□□□□□ -1.01
HMGCS1-204ENST00000507293 RPL27AP46776 148 aaKnown RBP8.72□□□□□ -1.01
HMGCS1-204ENST00000507293 GABARAPL2P60520 117 aa8.72□□□□□ -1.01
HMGCS1-204ENST00000507293 EIF4EBP1Q13541 118 aaPredicted RBP8.72□□□□□ -1.01
HMGCS1-204ENST00000507293 LINC00322Q6ZN03 302 aaPredicted RBP8.72□□□□□ -1.01
HMGCS1-204ENST00000507293 LAX1Q8IWV1 398 aa8.72□□□□□ -1.01
HMGCS1-204ENST00000507293 PUSL1Q8N0Z8 303 aaKnown RBP8.72□□□□□ -1.01
HMGCS1-204ENST00000507293 VSTM2AQ8TAG5 236 aa8.72□□□□□ -1.01
HMGCS1-204ENST00000507293 TMEM167AQ8TBQ9 72 aa8.72□□□□□ -1.01
HMGCS1-204ENST00000507293 LGALS14Q8TCE9 139 aa8.72□□□□□ -1.01
HMGCS1-204ENST00000507293 KCTD12Q96CX2 325 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms