RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 TMPRSS7Q7RTY8 843 aa14.29□□□□□ -0.12
SQSTM1-211ENST00000506690 TXN2Q99757 166 aa14.29□□□□□ -0.12
SQSTM1-211ENST00000506690 CLDN14O95500 239 aa14.29□□□□□ -0.12
SQSTM1-211ENST00000506690 CXorf1O96002 111 aa14.29□□□□□ -0.12
SQSTM1-211ENST00000506690 ARF1P84077 181 aaKnown RBP14.29□□□□□ -0.12
SQSTM1-211ENST00000506690 RPEL1Q2QD12 228 aa14.29□□□□□ -0.12
SQSTM1-211ENST00000506690 DCAF12Q5T6F0 453 aa14.29□□□□□ -0.12
SQSTM1-211ENST00000506690 MMD2Q8IY49 270 aa14.29□□□□□ -0.12
SQSTM1-211ENST00000506690 KCNS1Q96KK3 526 aa14.29□□□□□ -0.12
SQSTM1-211ENST00000506690 CDX2Q99626 313 aaPredicted RBP14.29□□□□□ -0.12
SQSTM1-211ENST00000506690 MPC1Q9Y5U8 109 aa14.29□□□□□ -0.12
SQSTM1-211ENST00000506690 LY96Q9Y6Y9 160 aa14.29□□□□□ -0.12
SQSTM1-211ENST00000506690 WDR87Q6ZQQ6 2873 aa14.28□□□□□ -0.12
SQSTM1-211ENST00000506690 C9JCJ5 164 aa14.28□□□□□ -0.12
SQSTM1-211ENST00000506690 SIRPB1O00241 398 aa14.28□□□□□ -0.12
SQSTM1-211ENST00000506690 RRHO14718 337 aa14.28□□□□□ -0.12
SQSTM1-211ENST00000506690 OR2H2O95918 312 aa14.28□□□□□ -0.12
SQSTM1-211ENST00000506690 IGHEP01854 428 aa14.28□□□□□ -0.12
SQSTM1-211ENST00000506690 CDKN1BP46527 198 aa14.28□□□□□ -0.12
SQSTM1-211ENST00000506690 UBE2V1Q13404 147 aa14.28□□□□□ -0.12
SQSTM1-211ENST00000506690 SPINK9Q5DT21 86 aa14.28□□□□□ -0.12
SQSTM1-211ENST00000506690 ST6GALNAC3Q8NDV1 305 aa14.28□□□□□ -0.12
SQSTM1-211ENST00000506690 TMEM45BQ96B21 275 aa14.28□□□□□ -0.12
SQSTM1-211ENST00000506690 OR2D2Q9H210 308 aa14.28□□□□□ -0.12
SQSTM1-211ENST00000506690 YTHDF2Q9Y5A9 579 aaKnown RBP14.28□□□□□ -0.12
SQSTM1-211ENST00000506690 A0A096LPE4 126 aa14.27□□□□□ -0.12
SQSTM1-211ENST00000506690 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.27□□□□□ -0.12
SQSTM1-211ENST00000506690 A0A0G2JMM0 328 aa14.27□□□□□ -0.12
SQSTM1-211ENST00000506690 A0A1W2PPB8 328 aa14.27□□□□□ -0.12
SQSTM1-211ENST00000506690 A0A1W2PPZ6 126 aa14.27□□□□□ -0.12
SQSTM1-211ENST00000506690 A0A1W2PRS3 328 aa14.27□□□□□ -0.12
SQSTM1-211ENST00000506690 A0A1W2PS18 150 aa14.27□□□□□ -0.12
SQSTM1-211ENST00000506690 C17orf98A8MV24 154 aa14.27□□□□□ -0.12
SQSTM1-211ENST00000506690 KIR3DP1A8MWS1 328 aa14.27□□□□□ -0.12
SQSTM1-211ENST00000506690 MPDU1O75352 247 aa14.27□□□□□ -0.12
SQSTM1-211ENST00000506690 REG1AP05451 166 aa14.27□□□□□ -0.12
SQSTM1-211ENST00000506690 COX6A1P12074 109 aa14.27□□□□□ -0.12
SQSTM1-211ENST00000506690 OPRK1P41145 380 aa14.27□□□□□ -0.12
SQSTM1-211ENST00000506690 AMTP48728 403 aa14.27□□□□□ -0.12
SQSTM1-211ENST00000506690 RPL31P62899 125 aaKnown RBP14.27□□□□□ -0.12
SQSTM1-211ENST00000506690 TGFBR3Q03167 851 aa14.27□□□□□ -0.12
SQSTM1-211ENST00000506690 V9GYV3 84 aa14.27□□□□□ -0.12
SQSTM1-211ENST00000506690 ZNF503-AS2A6NEH8 195 aa14.27□□□□□ -0.13
SQSTM1-211ENST00000506690 ANKRD30BLA7E2S9 258 aa14.27□□□□□ -0.13
SQSTM1-211ENST00000506690 A8MXE2 369 aa14.27□□□□□ -0.13
SQSTM1-211ENST00000506690 POM121L2Q96KW2 1035 aa14.27□□□□□ -0.13
SQSTM1-211ENST00000506690 WDR54Q9H977 334 aa14.27□□□□□ -0.13
SQSTM1-211ENST00000506690 MT-ND6P03923 174 aa14.26□□□□□ -0.13
SQSTM1-211ENST00000506690 PRRX1P54821 245 aa14.26□□□□□ -0.13
SQSTM1-211ENST00000506690 CATR1Q13166 79 aa14.26□□□□□ -0.13
SQSTM1-211ENST00000506690 H2BFWTQ7Z2G1 175 aa14.26□□□□□ -0.13
SQSTM1-211ENST00000506690 C11orf52Q96A22 123 aa14.26□□□□□ -0.13
SQSTM1-211ENST00000506690 APH1AQ96BI3 265 aa14.26□□□□□ -0.13
SQSTM1-211ENST00000506690 RCHY1Q96PM5 261 aa14.26□□□□□ -0.13
SQSTM1-211ENST00000506690 FREM1Q5H8C1 2179 aa14.26□□□□□ -0.13
SQSTM1-211ENST00000506690 IGHV5-10-1A0A0J9YXX1 117 aa14.26□□□□□ -0.13
SQSTM1-211ENST00000506690 J3QT63 122 aa14.26□□□□□ -0.13
SQSTM1-211ENST00000506690 NEURL1O76050 574 aa14.26□□□□□ -0.13
SQSTM1-211ENST00000506690 ZNF83P51522 516 aa14.26□□□□□ -0.13
SQSTM1-211ENST00000506690 MORN2Q502X0 79 aa14.26□□□□□ -0.13
SQSTM1-211ENST00000506690 RPS19BP1Q86WX3 136 aaKnown RBP14.26□□□□□ -0.13
SQSTM1-211ENST00000506690 MCEMP1Q8IX19 187 aa14.26□□□□□ -0.13
SQSTM1-211ENST00000506690 EAF1Q96JC9 268 aaPredicted RBP14.26□□□□□ -0.13
SQSTM1-211ENST00000506690 COX11Q9Y6N1 276 aa14.26□□□□□ -0.13
SQSTM1-211ENST00000506690 SDK1Q7Z5N4 2213 aa14.26□□□□□ -0.13
SQSTM1-211ENST00000506690 TRGV10A0A0A0MS01 117 aa14.25□□□□□ -0.13
SQSTM1-211ENST00000506690 SPATA46Q5T0L3 261 aa14.25□□□□□ -0.13
SQSTM1-211ENST00000506690 C9orf135Q5VTT2 229 aa14.25□□□□□ -0.13
SQSTM1-211ENST00000506690 TREML4Q6UXN2 200 aa14.25□□□□□ -0.13
SQSTM1-211ENST00000506690 OR8I2Q8N0Y5 310 aa14.25□□□□□ -0.13
SQSTM1-211ENST00000506690 SPEM1Q8N4L4 309 aa14.25□□□□□ -0.13
SQSTM1-211ENST00000506690 ZNF808Q8N4W9 903 aaPredicted RBP14.25□□□□□ -0.13
SQSTM1-211ENST00000506690 KLHDC1Q8N7A1 406 aa14.25□□□□□ -0.13
SQSTM1-211ENST00000506690 MRPS16Q9Y3D3 137 aaKnown RBP14.25□□□□□ -0.13
SQSTM1-211ENST00000506690 A0A1W2PQM1 296 aa14.25□□□□□ -0.13
SQSTM1-211ENST00000506690 DPRXA6NFQ7 191 aa14.25□□□□□ -0.13
SQSTM1-211ENST00000506690 FAM166BA8MTA8 275 aa14.25□□□□□ -0.13
SQSTM1-211ENST00000506690 ZNF324O75467 553 aaPredicted RBP14.25□□□□□ -0.13
SQSTM1-211ENST00000506690 RBMXL2O75526 392 aaKnown RBP14.25□□□□□ -0.13
SQSTM1-211ENST00000506690 RFPL3SP0C7P2 107 aa14.25□□□□□ -0.13
SQSTM1-211ENST00000506690 C3orf79P0CE67 100 aa14.25□□□□□ -0.13
SQSTM1-211ENST00000506690 WDR73Q6P4I2 378 aa14.25□□□□□ -0.13
SQSTM1-211ENST00000506690 NIT1Q86X76 327 aa14.25□□□□□ -0.13
SQSTM1-211ENST00000506690 LINC00470Q9BZP3 86 aa14.25□□□□□ -0.13
SQSTM1-211ENST00000506690 NAT8BQ9UHF3 227 aa14.25□□□□□ -0.13
SQSTM1-211ENST00000506690 CEP192Q8TEP8 1941 aa14.25□□□□□ -0.13
SQSTM1-211ENST00000506690 LOC105371242A0A075B767 164 aa14.24□□□□□ -0.13
SQSTM1-211ENST00000506690 AQP7O14520 342 aa14.24□□□□□ -0.13
SQSTM1-211ENST00000506690 MRPL33O75394 65 aaKnown RBP14.24□□□□□ -0.13
SQSTM1-211ENST00000506690 TSPOP30536 169 aa14.24□□□□□ -0.13
SQSTM1-211ENST00000506690 CX3CL1P78423 397 aa14.24□□□□□ -0.13
SQSTM1-211ENST00000506690 HTD2P86397 168 aa14.24□□□□□ -0.13
SQSTM1-211ENST00000506690 IGFBP7Q16270 282 aa14.24□□□□□ -0.13
SQSTM1-211ENST00000506690 TMEM136Q6ZRR5 245 aa14.24□□□□□ -0.13
SQSTM1-211ENST00000506690 MED12LQ86YW9 2145 aa14.24□□□□□ -0.13
SQSTM1-211ENST00000506690 LYG1Q8N1E2 194 aa14.24□□□□□ -0.13
SQSTM1-211ENST00000506690 TCTEX1D1Q8N7M0 179 aa14.24□□□□□ -0.13
SQSTM1-211ENST00000506690 MGST2Q99735 147 aa14.24□□□□□ -0.13
SQSTM1-211ENST00000506690 DEPPQ9NTK1 212 aa14.24□□□□□ -0.13
SQSTM1-211ENST00000506690 RAC2P15153 192 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms