RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 ZNF616Q08AN1 781 aa12.06□□□□□ -0.48
MED28-204ENST00000506409 MSMO1Q15800 293 aa12.06□□□□□ -0.48
MED28-204ENST00000506409 TNXAQ16473 311 aa12.06□□□□□ -0.48
MED28-204ENST00000506409 PRSS8Q16651 343 aa12.06□□□□□ -0.48
MED28-204ENST00000506409 MZT2AQ6P582 158 aa12.06□□□□□ -0.48
MED28-204ENST00000506409 MFSD4AQ8N468 514 aa12.06□□□□□ -0.48
MED28-204ENST00000506409 MRAPQ8TCY5 172 aa12.06□□□□□ -0.48
MED28-204ENST00000506409 AP3S1Q92572 193 aa12.06□□□□□ -0.48
MED28-204ENST00000506409 TMEM68Q96MH6 324 aa12.06□□□□□ -0.48
MED28-204ENST00000506409 GPHA2Q96T91 129 aa12.06□□□□□ -0.48
MED28-204ENST00000506409 ZNF355PQ9NSJ1 428 aa12.06□□□□□ -0.48
MED28-204ENST00000506409 TGP01266 2768 aa12.06□□□□□ -0.48
MED28-204ENST00000506409 CREBL2O60519 120 aaPredicted RBP12.05□□□□□ -0.48
MED28-204ENST00000506409 ACTL6BO94805 426 aa12.05□□□□□ -0.48
MED28-204ENST00000506409 TRGV3P03979 118 aa12.05□□□□□ -0.48
MED28-204ENST00000506409 LGALS1P09382 135 aaKnown RBP12.05□□□□□ -0.48
MED28-204ENST00000506409 ELK1P19419 428 aa12.05□□□□□ -0.48
MED28-204ENST00000506409 RFX2P48378 723 aa12.05□□□□□ -0.48
MED28-204ENST00000506409 TAS2R46P59540 309 aa12.05□□□□□ -0.48
MED28-204ENST00000506409 KRTAP10-11P60412 298 aa12.05□□□□□ -0.48
MED28-204ENST00000506409 HERV-K104P61576 105 aa12.05□□□□□ -0.48
MED28-204ENST00000506409 EGFEM1PQ0D2K5 195 aa12.05□□□□□ -0.48
MED28-204ENST00000506409 MRGPRG-AS1Q2M3A8 158 aa12.05□□□□□ -0.48
MED28-204ENST00000506409 TMEM17Q86X19 198 aa12.05□□□□□ -0.48
MED28-204ENST00000506409 POC5Q8NA72 575 aa12.05□□□□□ -0.48
MED28-204ENST00000506409 ZBTB34Q8NCN2 500 aa12.05□□□□□ -0.48
MED28-204ENST00000506409 OR5T1Q8NG75 326 aa12.05□□□□□ -0.48
MED28-204ENST00000506409 OR5H2Q8NGV7 314 aa12.05□□□□□ -0.48
MED28-204ENST00000506409 PHB2Q99623 299 aa12.05□□□□□ -0.48
MED28-204ENST00000506409 ALX4Q9H161 411 aaPredicted RBP12.05□□□□□ -0.48
MED28-204ENST00000506409 H3BUA1 57 aa12.04□□□□□ -0.48
MED28-204ENST00000506409 IGHV3-11P01762 117 aa12.04□□□□□ -0.48
MED28-204ENST00000506409 PMP2P02689 132 aa12.04□□□□□ -0.48
MED28-204ENST00000506409 ZNF182P17025 639 aaPredicted RBP12.04□□□□□ -0.48
MED28-204ENST00000506409 NAT1P18440 290 aa12.04□□□□□ -0.48
MED28-204ENST00000506409 KIR2DS2P43631 304 aa12.04□□□□□ -0.48
MED28-204ENST00000506409 BRWD1-AS2P59051 145 aa12.04□□□□□ -0.48
MED28-204ENST00000506409 DYRK1AQ13627 763 aa12.04□□□□□ -0.48
MED28-204ENST00000506409 ASPHD1Q5U4P2 390 aa12.04□□□□□ -0.48
MED28-204ENST00000506409 SNX29P2Q8IUI4 249 aa12.04□□□□□ -0.48
MED28-204ENST00000506409 MMD2Q8IY49 270 aa12.04□□□□□ -0.48
MED28-204ENST00000506409 VKORC1L1Q8N0U8 176 aa12.04□□□□□ -0.48
MED28-204ENST00000506409 GPX8Q8TED1 209 aa12.04□□□□□ -0.48
MED28-204ENST00000506409 SRSF12Q8WXF0 261 aaKnown RBP12.04□□□□□ -0.48
MED28-204ENST00000506409 ZNF430Q9H8G1 570 aaPredicted RBP12.04□□□□□ -0.48
MED28-204ENST00000506409 SCPEP1Q9HB40 452 aa12.04□□□□□ -0.48
MED28-204ENST00000506409 TNCP24821 2201 aa12.04□□□□□ -0.48
MED28-204ENST00000506409 MSGN1A6NI15 193 aa12.03□□□□□ -0.48
MED28-204ENST00000506409 FAM25AB3EWG3 89 aa12.03□□□□□ -0.48
MED28-204ENST00000506409 FAM25CB3EWG5 89 aa12.03□□□□□ -0.48
MED28-204ENST00000506409 FAM25GB3EWG6 89 aa12.03□□□□□ -0.48
MED28-204ENST00000506409 SEC14L6B5MCN3 397 aa12.03□□□□□ -0.48
MED28-204ENST00000506409 APELAP0DMC3 54 aa12.03□□□□□ -0.48
MED28-204ENST00000506409 HLA-DMAP28067 261 aa12.03□□□□□ -0.48
MED28-204ENST00000506409 CATR1Q13166 79 aa12.03□□□□□ -0.48
MED28-204ENST00000506409 C9orf66Q5T8R8 295 aa12.03□□□□□ -0.48
MED28-204ENST00000506409 DHRS11Q6UWP2 260 aa12.03□□□□□ -0.48
MED28-204ENST00000506409 ZNF818PQ6ZRF7 136 aa12.03□□□□□ -0.48
MED28-204ENST00000506409 SPAG16Q8N0X2 631 aa12.03□□□□□ -0.48
MED28-204ENST00000506409 VSTM2AQ8TAG5 236 aa12.03□□□□□ -0.48
MED28-204ENST00000506409 BORCS5Q969J3 196 aa12.03□□□□□ -0.48
MED28-204ENST00000506409 ZNF2Q9BSG1 426 aaPredicted RBP12.03□□□□□ -0.48
MED28-204ENST00000506409 COA4Q9NYJ1 87 aa12.03□□□□□ -0.48
MED28-204ENST00000506409 LINC01619G3V211 115 aa12.02□□□□□ -0.49
MED28-204ENST00000506409 SULT1C2O00338 296 aa12.02□□□□□ -0.49
MED28-204ENST00000506409 MPPED1O15442 326 aa12.02□□□□□ -0.49
MED28-204ENST00000506409 RAMP3O60896 148 aa12.02□□□□□ -0.49
MED28-204ENST00000506409 OR2A4O95047 310 aa12.02□□□□□ -0.49
MED28-204ENST00000506409 HRASP01112 189 aa12.02□□□□□ -0.49
MED28-204ENST00000506409 HRH1P35367 487 aa12.02□□□□□ -0.49
MED28-204ENST00000506409 LYSMD2Q8IV50 215 aa12.02□□□□□ -0.49
MED28-204ENST00000506409 MOB3AQ96BX8 217 aa12.02□□□□□ -0.49
MED28-204ENST00000506409 RHOVQ96L33 236 aa12.02□□□□□ -0.49
MED28-204ENST00000506409 OR2A7Q96R45 310 aa12.02□□□□□ -0.49
MED28-204ENST00000506409 ZMAT5Q9UDW3 170 aaKnown RBP12.02□□□□□ -0.49
MED28-204ENST00000506409 ADAM30Q9UKF2 790 aa12.02□□□□□ -0.49
MED28-204ENST00000506409 IGHV4OR15-8A0A075B7B6 117 aa12.01□□□□□ -0.49
MED28-204ENST00000506409 A0A087WW49 117 aa12.01□□□□□ -0.49
MED28-204ENST00000506409 A0A0G2JLM5 398 aa12.01□□□□□ -0.49
MED28-204ENST00000506409 C13orf42A0A1B0GVH6 325 aa12.01□□□□□ -0.49
MED28-204ENST00000506409 RBFOX2O43251 390 aaKnown RBP eCLIP12.01□□□□□ -0.49
MED28-204ENST00000506409 KBTBD11O94819 623 aa12.01□□□□□ -0.49
MED28-204ENST00000506409 GNRHRP30968 328 aa12.01□□□□□ -0.49
MED28-204ENST00000506409 C10orf55Q5SWW7 151 aa12.01□□□□□ -0.49
MED28-204ENST00000506409 AADACL3Q5VUY0 350 aa12.01□□□□□ -0.49
MED28-204ENST00000506409 SSX9Q7RTT3 188 aa12.01□□□□□ -0.49
MED28-204ENST00000506409 CLVS1Q8IUQ0 354 aaPredicted RBP12.01□□□□□ -0.49
MED28-204ENST00000506409 PUSL1Q8N0Z8 303 aaKnown RBP12.01□□□□□ -0.49
MED28-204ENST00000506409 OR6F1Q8NGZ6 308 aa12.01□□□□□ -0.49
MED28-204ENST00000506409 OR51H1Q8NH63 302 aa12.01□□□□□ -0.49
MED28-204ENST00000506409 DCUN1D4Q92564 292 aa12.01□□□□□ -0.49
MED28-204ENST00000506409 SPIN2AQ99865 258 aa12.01□□□□□ -0.49
MED28-204ENST00000506409 SPIN2BQ9BPZ2 258 aa12.01□□□□□ -0.49
MED28-204ENST00000506409 TINAGL1Q9GZM7 467 aaPredicted RBP12.01□□□□□ -0.49
MED28-204ENST00000506409 WI2-2373I1.2A0A1W2PRP0 233 aa12□□□□□ -0.49
MED28-204ENST00000506409 K7EIL1 84 aa12□□□□□ -0.49
MED28-204ENST00000506409 OVOL1O14753 267 aa12□□□□□ -0.49
MED28-204ENST00000506409 BRI3O95415 125 aa12□□□□□ -0.49
MED28-204ENST00000506409 HSPB1P04792 205 aaKnown RBP12□□□□□ -0.49
MED28-204ENST00000506409 OR9G9P0C7N8 305 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms