RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.21□□□□□ -1.42
SNF8-204ENST00000506104 ZNF485Q8NCK3 441 aa6.21□□□□□ -1.42
SNF8-204ENST00000506104 OR56B1Q8NGI3 324 aa6.21□□□□□ -1.42
SNF8-204ENST00000506104 OR4A4PQ8NGN8 299 aa6.21□□□□□ -1.42
SNF8-204ENST00000506104 PTX4Q96A99 478 aa6.21□□□□□ -1.42
SNF8-204ENST00000506104 MND1Q9BWT6 205 aa6.21□□□□□ -1.42
SNF8-204ENST00000506104 UBQLN2Q9UHD9 624 aa6.21□□□□□ -1.42
SNF8-204ENST00000506104 ZNF230Q9UIE0 474 aaPredicted RBP6.21□□□□□ -1.42
SNF8-204ENST00000506104 SACSQ9NZJ4 4579 aa6.2□□□□□ -1.42
SNF8-204ENST00000506104 TRBV6-6A0A0A6YYG2 114 aa6.2□□□□□ -1.42
SNF8-204ENST00000506104 IGHV3-35A0A0C4DH35 117 aa6.2□□□□□ -1.42
SNF8-204ENST00000506104 DENRO43583 198 aaKnown RBP6.2□□□□□ -1.42
SNF8-204ENST00000506104 CREBL2O60519 120 aaPredicted RBP6.2□□□□□ -1.42
SNF8-204ENST00000506104 DEDDO75618 318 aa6.2□□□□□ -1.42
SNF8-204ENST00000506104 REG1AP05451 166 aa6.2□□□□□ -1.42
SNF8-204ENST00000506104 SAA1P0DJI8 122 aaPredicted RBP6.2□□□□□ -1.42
SNF8-204ENST00000506104 DEFA4P12838 97 aa6.2□□□□□ -1.42
SNF8-204ENST00000506104 RPL35AP18077 110 aaKnown RBP6.2□□□□□ -1.42
SNF8-204ENST00000506104 CBLN1P23435 193 aa6.2□□□□□ -1.42
SNF8-204ENST00000506104 UBE2KP61086 200 aa6.2□□□□□ -1.42
SNF8-204ENST00000506104 ZNF45Q02386 682 aa6.2□□□□□ -1.42
SNF8-204ENST00000506104 DEFB135Q30KP9 77 aa6.2□□□□□ -1.42
SNF8-204ENST00000506104 ANKRD55Q3KP44 614 aa6.2□□□□□ -1.42
SNF8-204ENST00000506104 FAM106AQ4KMX7 169 aa6.2□□□□□ -1.42
SNF8-204ENST00000506104 TMEM177Q53S58 311 aa6.2□□□□□ -1.42
SNF8-204ENST00000506104 LIPKQ5VXJ0 399 aa6.2□□□□□ -1.42
SNF8-204ENST00000506104 BTNL8Q6UX41 500 aa6.2□□□□□ -1.42
SNF8-204ENST00000506104 LINC00322Q6ZN03 302 aaPredicted RBP6.2□□□□□ -1.42
SNF8-204ENST00000506104 TMEM61Q8N0U2 210 aa6.2□□□□□ -1.42
SNF8-204ENST00000506104 VKORC1L1Q8N0U8 176 aa6.2□□□□□ -1.42
SNF8-204ENST00000506104 RPP25LQ8N5L8 163 aaKnown RBP6.2□□□□□ -1.42
SNF8-204ENST00000506104 TEX45Q8NA69 505 aa6.2□□□□□ -1.42
SNF8-204ENST00000506104 UXS1Q8NBZ7 420 aa6.2□□□□□ -1.42
SNF8-204ENST00000506104 NECAP1Q8NC96 275 aa6.2□□□□□ -1.42
SNF8-204ENST00000506104 PHYHIPQ92561 330 aa6.2□□□□□ -1.42
SNF8-204ENST00000506104 UFD1Q92890 307 aa6.2□□□□□ -1.42
SNF8-204ENST00000506104 ADTRPQ96IZ2 230 aa6.2□□□□□ -1.42
SNF8-204ENST00000506104 SPIN2AQ99865 258 aa6.2□□□□□ -1.42
SNF8-204ENST00000506104 SPIN2BQ9BPZ2 258 aa6.2□□□□□ -1.42
SNF8-204ENST00000506104 OVOL2Q9BRP0 275 aa6.2□□□□□ -1.42
SNF8-204ENST00000506104 ZNF430Q9H8G1 570 aaPredicted RBP6.2□□□□□ -1.42
SNF8-204ENST00000506104 FAM53CQ9NYF3 392 aa6.2□□□□□ -1.42
SNF8-204ENST00000506104 TECRQ9NZ01 308 aaKnown RBP6.2□□□□□ -1.42
SNF8-204ENST00000506104 PSORS1C1Q9UIG5 152 aa6.2□□□□□ -1.42
SNF8-204ENST00000506104 KLK5Q9Y337 293 aaPredicted RBP6.2□□□□□ -1.42
SNF8-204ENST00000506104 DNAH7Q8WXX0 4024 aa6.19□□□□□ -1.42
SNF8-204ENST00000506104 SPRY2O43597 315 aa6.19□□□□□ -1.42
SNF8-204ENST00000506104 NDUFB8O95169 186 aa6.19□□□□□ -1.42
SNF8-204ENST00000506104 CD1AP06126 327 aa6.19□□□□□ -1.42
SNF8-204ENST00000506104 FCGR3AP08637 254 aa6.19□□□□□ -1.42
SNF8-204ENST00000506104 GNAO1P09471 354 aa6.19□□□□□ -1.42
SNF8-204ENST00000506104 GNB3P16520 340 aa6.19□□□□□ -1.42
SNF8-204ENST00000506104 GADD45AP24522 165 aa6.19□□□□□ -1.42
SNF8-204ENST00000506104 MECP2P51608 486 aaKnown RBP6.19□□□□□ -1.42
SNF8-204ENST00000506104 PSMD7P51665 324 aa6.19□□□□□ -1.42
SNF8-204ENST00000506104 TMEM50BP56557 158 aa6.19□□□□□ -1.42
SNF8-204ENST00000506104 RPS25P62851 125 aaKnown RBP6.19□□□□□ -1.42
SNF8-204ENST00000506104 QRFPP83859 136 aa6.19□□□□□ -1.42
SNF8-204ENST00000506104 CDK10Q15131 360 aa6.19□□□□□ -1.42
SNF8-204ENST00000506104 C2orf76Q3KRA6 126 aa6.19□□□□□ -1.42
SNF8-204ENST00000506104 ZNF585BQ52M93 769 aa6.19□□□□□ -1.42
SNF8-204ENST00000506104 PLAC9Q5JTB6 97 aa6.19□□□□□ -1.42
SNF8-204ENST00000506104 SSX9Q7RTT3 188 aa6.19□□□□□ -1.42
SNF8-204ENST00000506104 LYG2Q86SG7 212 aa6.19□□□□□ -1.42
SNF8-204ENST00000506104 SLC25A42Q86VD7 318 aa6.19□□□□□ -1.42
SNF8-204ENST00000506104 MMD2Q8IY49 270 aa6.19□□□□□ -1.42
SNF8-204ENST00000506104 SLC38A6Q8IZM9 456 aa6.19□□□□□ -1.42
SNF8-204ENST00000506104 EEF1AKMT3Q96AZ1 226 aa6.19□□□□□ -1.42
SNF8-204ENST00000506104 FAM3DQ96BQ1 224 aa6.19□□□□□ -1.42
SNF8-204ENST00000506104 RAB3CQ96E17 227 aa6.19□□□□□ -1.42
SNF8-204ENST00000506104 C5orf30Q96GV9 206 aa6.19□□□□□ -1.42
SNF8-204ENST00000506104 CCDC90BQ9GZT6 254 aa6.19□□□□□ -1.42
SNF8-204ENST00000506104 HSF4Q9ULV5 492 aa6.19□□□□□ -1.42
SNF8-204ENST00000506104 MRPS7Q9Y2R9 242 aaKnown RBP6.19□□□□□ -1.42
SNF8-204ENST00000506104 PRELID3BQ9Y3B1 194 aa6.19□□□□□ -1.42
SNF8-204ENST00000506104 HYDINQ4G0P3 5121 aa6.19□□□□□ -1.42
SNF8-204ENST00000506104 TMEM272A0A1B0GTI8 110 aa6.18□□□□□ -1.42
SNF8-204ENST00000506104 LINC00473A8K010 186 aa6.18□□□□□ -1.42
SNF8-204ENST00000506104 SLC17A2O00624 439 aa6.18□□□□□ -1.42
SNF8-204ENST00000506104 RPA2P15927 270 aa6.18□□□□□ -1.42
SNF8-204ENST00000506104 CALRP27797 417 aaKnown RBP6.18□□□□□ -1.42
SNF8-204ENST00000506104 MAP2K4P45985 399 aa6.18□□□□□ -1.42
SNF8-204ENST00000506104 RPL27AP46776 148 aaKnown RBP6.18□□□□□ -1.42
SNF8-204ENST00000506104 APOC4P55056 127 aa6.18□□□□□ -1.42
SNF8-204ENST00000506104 PRR20EP86478 221 aa6.18□□□□□ -1.42
SNF8-204ENST00000506104 PRR20CP86479 221 aa6.18□□□□□ -1.42
SNF8-204ENST00000506104 PRR20DP86480 221 aa6.18□□□□□ -1.42
SNF8-204ENST00000506104 PRR20BP86481 221 aa6.18□□□□□ -1.42
SNF8-204ENST00000506104 PRR20AP86496 221 aa6.18□□□□□ -1.42
SNF8-204ENST00000506104 EWSR1Q01844 656 aaKnown RBP eCLIP6.18□□□□□ -1.42
SNF8-204ENST00000506104 PLA2G7Q13093 441 aa6.18□□□□□ -1.42
SNF8-204ENST00000506104 SPHARQ15513 63 aa6.18□□□□□ -1.42
SNF8-204ENST00000506104 CEMP1Q6PRD7 247 aaPredicted RBP6.18□□□□□ -1.42
SNF8-204ENST00000506104 KCTD9Q7L273 389 aa6.18□□□□□ -1.42
SNF8-204ENST00000506104 TTC9CQ8N5M4 171 aa6.18□□□□□ -1.42
SNF8-204ENST00000506104 OR1L6Q8NGR2 347 aa6.18□□□□□ -1.42
SNF8-204ENST00000506104 OSR1Q8TAX0 266 aaPredicted RBP6.18□□□□□ -1.42
SNF8-204ENST00000506104 TCTEX1D2Q8WW35 142 aa6.18□□□□□ -1.42
SNF8-204ENST00000506104 CLUHP3Q96NS8 147 aa6.18□□□□□ -1.42
SNF8-204ENST00000506104 SCN3BQ9NY72 215 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms