RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 A0A1W2PPK0 400 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 A8MWP6 167 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 F8W735 103 aaPredicted RBP2.31□□□□□ -2.04
TCOF1-208ENST00000506063 H3BUA1 57 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 SDCBPO00560 298 aaPredicted RBP2.31□□□□□ -2.04
TCOF1-208ENST00000506063 GEMIN2O14893 280 aaKnown RBP2.31□□□□□ -2.04
TCOF1-208ENST00000506063 SLC31A2O15432 143 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 NBR2O15453 112 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 OGG1O15527 345 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 NOL3O60936 208 aaKnown RBP2.31□□□□□ -2.04
TCOF1-208ENST00000506063 PDCD6O75340 191 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 CA11O75493 328 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 SCGNO76038 276 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 CDRT1O95170 752 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 TNFAIP8O95379 198 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 LALBAP00709 142 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 IGKV1D-12P01611 117 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 UCHL1P09936 223 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 C8orf88P0DMB2 117 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 CALCBP10092 127 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 MIFP14174 115 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 IGFBP3P17936 291 aaPredicted RBP2.31□□□□□ -2.04
TCOF1-208ENST00000506063 CRHBPP24387 322 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 HTR2CP28335 458 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 SSTR5P35346 364 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 PSMD7P51665 324 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 RPS25P62851 125 aaKnown RBP2.31□□□□□ -2.04
TCOF1-208ENST00000506063 PAX5Q02548 391 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 AESQ08117 197 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 CBX3Q13185 183 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 LTC4SQ16873 150 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 TATDN3Q17R31 274 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 ANKRD55Q3KP44 614 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 KCTD21Q4G0X4 260 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 ACSM3Q53FZ2 586 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 RAB12Q6IQ22 244 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 ZNF529Q6P280 563 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 ZNF773Q6PK81 442 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 UNQ5815/PRO19632Q6UWF5 114 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 BTNL8Q6UX41 500 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 CEACAM19Q7Z692 300 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 PPP1R27Q86WC6 154 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 APRG1Q8IVJ8 170 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 CDH26Q8IXH8 852 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 PRR18Q8N4B5 295 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 LINC00311Q8N616 119 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 OR2C3Q8N628 320 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 NANOGP1Q8N7R0 232 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 POC5Q8NA72 575 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 SUMF2Q8NBJ7 301 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 BVESQ8NE79 360 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 OR2AK2Q8NG84 335 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 OR51T1Q8NGJ9 327 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 OR1L6Q8NGR2 347 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 OR5B3Q8NH48 314 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 SETD6Q8TBK2 473 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 MRGPRDQ8TDS7 321 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 NRG4Q8WWG1 115 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 TMEM203Q969S6 136 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 DAZAP1Q96EP5 407 aaKnown RBP2.31□□□□□ -2.04
TCOF1-208ENST00000506063 RNF125Q96EQ8 232 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 Q96M66 194 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 MGLLQ99685 303 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 NICN1Q9BSH3 213 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 ABHD14AQ9BUJ0 271 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 Q9H3A6 140 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 IFT22Q9H7X7 185 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 C12orf4Q9NQ89 552 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 IDI2-AS1Q9NZ38 188 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 STEAP1Q9UHE8 339 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 KIF25Q9UIL4 384 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 JPT1Q9UK76 154 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 MGAT4AQ9UM21 535 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 LINC00588Q9Y4M8 146 aa2.31□□□□□ -2.04
TCOF1-208ENST00000506063 A0A087WTM6 91 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 TRAV24A0A0B4J272 114 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 TRAV25A0A0B4J276 109 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 LOC100506127A0A0U1RQW1 187 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 A0A1W2PP11 408 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 METTL21EPA6NDL7 271 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 C15orf61A6NNL5 157 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 SLC17A2O00624 439 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 SLC22A1O15245 554 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 GPX5O75715 221 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 IFNA5P01569 189 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 HLA-AP01891 365 aaKnown RBP2.3□□□□□ -2.04
TCOF1-208ENST00000506063 GLAP06280 429 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 CD3GP09693 182 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 CPEP16870 476 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 RAB3BP20337 219 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 GALP22466 123 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 TALDO1P37837 337 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 MAP2K4P45985 399 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 ELLP55199 621 aaPredicted RBP2.3□□□□□ -2.04
TCOF1-208ENST00000506063 LINC00315P59091 139 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 RPS16P62249 146 aaKnown RBP2.3□□□□□ -2.04
TCOF1-208ENST00000506063 RPS11P62280 158 aaKnown RBP eCLIP2.3□□□□□ -2.04
TCOF1-208ENST00000506063 HLA-DRB3P79483 266 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 TPBGQ13641 420 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 IRF3Q14653 427 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms