RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 H1FOOQ8IZA3 346 aaPredicted RBP3.42□□□□□ -1.86
RFC1-208ENST00000504849 TMEM156Q8N614 296 aa3.42□□□□□ -1.86
RFC1-208ENST00000504849 ZFP62Q8NB50 900 aaPredicted RBP3.42□□□□□ -1.86
RFC1-208ENST00000504849 APCDD1LQ8NCL9 501 aa3.42□□□□□ -1.86
RFC1-208ENST00000504849 OR10A7Q8NGE5 316 aa3.42□□□□□ -1.86
RFC1-208ENST00000504849 OR1L4Q8NGR5 311 aa3.42□□□□□ -1.86
RFC1-208ENST00000504849 OR6X1Q8NH79 312 aa3.42□□□□□ -1.86
RFC1-208ENST00000504849 OR1F12Q8NHA8 337 aa3.42□□□□□ -1.86
RFC1-208ENST00000504849 SCGB1C1Q8TD33 95 aa3.42□□□□□ -1.86
RFC1-208ENST00000504849 RNASEH2CQ8TDP1 164 aaKnown RBP3.42□□□□□ -1.86
RFC1-208ENST00000504849 ZNF721Q8TF20 911 aa3.42□□□□□ -1.86
RFC1-208ENST00000504849 Q8WTZ3 238 aa3.42□□□□□ -1.86
RFC1-208ENST00000504849 HPSE2Q8WWQ2 592 aa3.42□□□□□ -1.86
RFC1-208ENST00000504849 DLX4Q92988 240 aaPredicted RBP3.42□□□□□ -1.86
RFC1-208ENST00000504849 HIST1H2BHQ93079 126 aa3.42□□□□□ -1.86
RFC1-208ENST00000504849 IL22RA2Q969J5 263 aa3.42□□□□□ -1.86
RFC1-208ENST00000504849 TOMM40LQ969M1 308 aa3.42□□□□□ -1.86
RFC1-208ENST00000504849 SPTSSAQ969W0 71 aa3.42□□□□□ -1.86
RFC1-208ENST00000504849 C18orf12Q96KH6 178 aa3.42□□□□□ -1.86
RFC1-208ENST00000504849 C1orf147Q96MC9 270 aaPredicted RBP3.42□□□□□ -1.86
RFC1-208ENST00000504849 TECTBQ96PL2 329 aa3.42□□□□□ -1.86
RFC1-208ENST00000504849 ATP5SQ99766 215 aa3.42□□□□□ -1.86
RFC1-208ENST00000504849 HIST1H2BNQ99877 126 aa3.42□□□□□ -1.86
RFC1-208ENST00000504849 HIST1H2BMQ99879 126 aa3.42□□□□□ -1.86
RFC1-208ENST00000504849 CABLES2Q9BTV7 478 aa3.42□□□□□ -1.86
RFC1-208ENST00000504849 SCRT1Q9BWW7 348 aa3.42□□□□□ -1.86
RFC1-208ENST00000504849 PARP12Q9H0J9 701 aaKnown RBP3.42□□□□□ -1.86
RFC1-208ENST00000504849 SH3BGRL3Q9H299 93 aa3.42□□□□□ -1.86
RFC1-208ENST00000504849 HIPK2Q9H2X6 1198 aa3.42□□□□□ -1.86
RFC1-208ENST00000504849 FAM60AQ9NP50 221 aa3.42□□□□□ -1.86
RFC1-208ENST00000504849 LYRM2Q9NU23 88 aaPredicted RBP3.42□□□□□ -1.86
RFC1-208ENST00000504849 CBY1Q9Y3M2 126 aa3.42□□□□□ -1.86
RFC1-208ENST00000504849 V9GYS6 101 aa3.42□□□□□ -1.86
RFC1-208ENST00000504849 ZFYVE26Q68DK2 2539 aa3.42□□□□□ -1.86
RFC1-208ENST00000504849 DMDP11532 3685 aa3.42□□□□□ -1.86
RFC1-208ENST00000504849 HELZ2Q9BYK8 2649 aaKnown RBP3.41□□□□□ -1.86
RFC1-208ENST00000504849 CACNA1HO95180 2353 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 TRIOO75962 3097 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 GVINP1Q7Z2Y8 2422 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 PLXND1Q9Y4D7 1925 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 TRBV24-1A0A075B6N3 115 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 IGKV3D-11A0A0A0MRZ8 115 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 TGIF2-C20orf24A0A0A6YYL0 155 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 TRAV25A0A0B4J276 109 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 C3orf85A0A1B0GTC6 90 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 A0A1B0GV50 99 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 LRP5LA4QPB2 252 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 CLEC18AA5D8T8 446 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 TRDCB7Z8K6 153 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 C9J4A7 227 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 C5orf67F2Z3F1 127 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 M0R143 59 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 PHOX2AO14813 284 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 XRCC2O43543 280 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 SSSCA1O60232 199 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 PRKNO60260 465 aaPredicted RBP3.41□□□□□ -1.86
RFC1-208ENST00000504849 RAMP1O60894 148 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 KLF8O95600 359 aaPredicted RBP3.41□□□□□ -1.86
RFC1-208ENST00000504849 CRYABP02511 175 aaKnown RBP3.41□□□□□ -1.86
RFC1-208ENST00000504849 TRGC2P03986 189 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 IGKV3-11P04433 115 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 IGF1P05019 195 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 CXCL1P09341 107 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 METTL15P1P0C7V9 234 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 RNF224P0DH78 156 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 BCL2P10415 239 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 RPL35AP18077 110 aaKnown RBP3.41□□□□□ -1.86
RFC1-208ENST00000504849 UCP1P25874 307 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 IL2RGP31785 369 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 RND2P52198 227 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 TAS2R30P59541 319 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 FXYD4P59646 89 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 RND3P61587 244 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 NUTF2P61970 127 aaKnown RBP3.41□□□□□ -1.86
RFC1-208ENST00000504849 SLC10A1Q14973 349 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 MS4A18Q3C1V0 323 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 KCNIP4Q6PIL6 250 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 SLC25A47Q6Q0C1 308 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 COLCA1Q6ZS62 124 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 ZNF100Q8IYN0 542 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 FBXL14Q8N1E6 418 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 METTL27Q8N6F8 245 aaPredicted RBP3.41□□□□□ -1.86
RFC1-208ENST00000504849 CYB561D1Q8N8Q1 229 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 ZNF441Q8N8Z8 693 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 CLEC18CQ8NCF0 446 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 OR10AD1Q8NGE0 317 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 OR5L2Q8NGL0 311 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 OR5L1Q8NGL2 311 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 OR1P1Q8NH06 330 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 CLDND2Q8NHS1 167 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 SSC4DQ8WTU2 575 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 OXGR1Q96P68 337 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 SPACA5Q96QH8 159 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 RARRES2Q99969 163 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 DDA1Q9BW61 102 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 MRPL37Q9BZE1 423 aaKnown RBP3.41□□□□□ -1.86
RFC1-208ENST00000504849 ACTR3CQ9C0K3 210 aaPredicted RBP3.41□□□□□ -1.86
RFC1-208ENST00000504849 WFDC1Q9HC57 220 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 SLC2A9Q9NRM0 540 aa3.41□□□□□ -1.86
RFC1-208ENST00000504849 MED29Q9NX70 200 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms