RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 SPATA46Q5T0L3 261 aa5.24□□□□□ -1.57
LINC02397-201ENST00000504409 FAM231DQ6ZW35 169 aa5.24□□□□□ -1.57
LINC02397-201ENST00000504409 FER1L6-AS1Q8NA97 138 aa5.24□□□□□ -1.57
LINC02397-201ENST00000504409 ARID1AO14497 2285 aa5.24□□□□□ -1.57
LINC02397-201ENST00000504409 A0A0G2JK05 382 aa5.24□□□□□ -1.57
LINC02397-201ENST00000504409 CXCL14O95715 111 aa5.24□□□□□ -1.57
LINC02397-201ENST00000504409 CKS2P33552 79 aa5.24□□□□□ -1.57
LINC02397-201ENST00000504409 TPTE2P1Q5T6R2 138 aa5.24□□□□□ -1.57
LINC02397-201ENST00000504409 OR8A1Q8NGG7 326 aa5.24□□□□□ -1.57
LINC02397-201ENST00000504409 PAXXQ9BUH6 204 aa5.24□□□□□ -1.57
LINC02397-201ENST00000504409 PLPP3O14495 311 aa5.24□□□□□ -1.57
LINC02397-201ENST00000504409 GPX1P07203 203 aa5.24□□□□□ -1.57
LINC02397-201ENST00000504409 FGF12P61328 243 aa5.24□□□□□ -1.57
LINC02397-201ENST00000504409 ZIC1Q15915 447 aa5.24□□□□□ -1.57
LINC02397-201ENST00000504409 WBP2Q969T9 261 aa5.24□□□□□ -1.57
LINC02397-201ENST00000504409 C18orf12Q96KH6 178 aa5.24□□□□□ -1.57
LINC02397-201ENST00000504409 CCL1P22362 96 aa5.24□□□□□ -1.57
LINC02397-201ENST00000504409 RPL23P62829 140 aaKnown RBP5.24□□□□□ -1.57
LINC02397-201ENST00000504409 LAIR2Q6ISS4 152 aa5.24□□□□□ -1.57
LINC02397-201ENST00000504409 Q71RC1 249 aaPredicted RBP5.24□□□□□ -1.57
LINC02397-201ENST00000504409 SP7Q8TDD2 431 aaPredicted RBP5.24□□□□□ -1.57
LINC02397-201ENST00000504409 ANKRD10Q9NXR5 420 aa5.24□□□□□ -1.57
LINC02397-201ENST00000504409 KIAA1671Q9BY89 1806 aa5.24□□□□□ -1.57
LINC02397-201ENST00000504409 TRAV14DV4A0A0A6YYC5 116 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 B4GALNT1Q00973 533 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 Q96M66 194 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 APOOQ9BUR5 198 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 NPCDR1Q9BY65 106 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 GP6Q9HCN6 339 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 HIGD1BQ9P298 99 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 H3BVH4 76 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 DLL1O00548 723 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 FRS3O43559 492 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 SERF1AO75920 110 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 PSG5Q15238 335 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 HMGN2P46Q86SG4 172 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 ZNF664Q8N3J9 261 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 OR5AN1Q8NGI8 311 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 OR1L8Q8NGR8 309 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 SBF1O95248 1867 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 CD38P28907 300 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 PTGDSP41222 190 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 LHX8Q68G74 356 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 AHRRA9YTQ3 701 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 ZFP36L2P47974 494 aaKnown RBP5.23□□□□□ -1.57
LINC02397-201ENST00000504409 DUSP2Q05923 314 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 LY6G6FQ5SQ64 297 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 RPP21Q9H633 154 aaKnown RBP5.23□□□□□ -1.57
LINC02397-201ENST00000504409 TRBV6-6A0A0A6YYG2 114 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 RPL8P62917 257 aaKnown RBP5.23□□□□□ -1.57
LINC02397-201ENST00000504409 GUCA2AQ02747 115 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 FBXO46Q6PJ61 603 aaPredicted RBP5.23□□□□□ -1.57
LINC02397-201ENST00000504409 POLR2AP24928 1970 aaKnown RBP5.23□□□□□ -1.57
LINC02397-201ENST00000504409 DXOO77932 396 aaKnown RBP5.23□□□□□ -1.57
LINC02397-201ENST00000504409 CTSOP43234 321 aaPredicted RBP5.23□□□□□ -1.57
LINC02397-201ENST00000504409 SEC13P55735 322 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 SNHG12Q9BXW3 62 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 PRDM14Q9GZV8 571 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 ZMAT3Q9HA38 289 aaKnown RBP5.23□□□□□ -1.57
LINC02397-201ENST00000504409 GREB1Q4ZG55 1949 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 TRAV5A0A0B4J249 113 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 ZNF865P0CJ78 1059 aaPredicted RBP5.23□□□□□ -1.57
LINC02397-201ENST00000504409 C1QL3Q5VWW1 255 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 CLEC2AQ6UVW9 174 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 OR10AC1Q8NH08 325 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 ATOX1O00244 68 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 FOXH1O75593 365 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 NDUFB4O95168 129 aa5.23□□□□□ -1.57
LINC02397-201ENST00000504409 LOC107984156A0A0G2JMH3 177 aa5.22□□□□□ -1.57
LINC02397-201ENST00000504409 HSPB6O14558 160 aa5.22□□□□□ -1.57
LINC02397-201ENST00000504409 NKX2-8O15522 239 aa5.22□□□□□ -1.57
LINC02397-201ENST00000504409 YRDCQ86U90 279 aaKnown RBP5.22□□□□□ -1.57
LINC02397-201ENST00000504409 TMEM25Q86YD3 366 aa5.22□□□□□ -1.57
LINC02397-201ENST00000504409 ARL17AQ8IVW1 177 aa5.22□□□□□ -1.57
LINC02397-201ENST00000504409 CELA2BP08218 269 aaPredicted RBP5.22□□□□□ -1.57
LINC02397-201ENST00000504409 HOXB2P14652 356 aa5.22□□□□□ -1.57
LINC02397-201ENST00000504409 PAX1P15863 534 aa5.22□□□□□ -1.57
LINC02397-201ENST00000504409 IGFBP3P17936 291 aaPredicted RBP5.22□□□□□ -1.57
LINC02397-201ENST00000504409 IL11P20809 199 aa5.22□□□□□ -1.57
LINC02397-201ENST00000504409 RPS15P62841 145 aaKnown RBP5.22□□□□□ -1.57
LINC02397-201ENST00000504409 BCDIN3DQ7Z5W3 292 aaKnown RBP5.22□□□□□ -1.57
LINC02397-201ENST00000504409 SSPNQ14714 243 aa5.22□□□□□ -1.57
LINC02397-201ENST00000504409 FAM27D1Q5T7N8 215 aa5.22□□□□□ -1.57
LINC02397-201ENST00000504409 TMEM178AQ8NBL3 297 aa5.22□□□□□ -1.57
LINC02397-201ENST00000504409 C1QTNF4Q9BXJ3 329 aa5.22□□□□□ -1.57
LINC02397-201ENST00000504409 LINC00271P0C7V0 271 aa5.22□□□□□ -1.57
LINC02397-201ENST00000504409 SLC25A16P16260 332 aa5.22□□□□□ -1.57
LINC02397-201ENST00000504409 PRDX2P32119 198 aa5.22□□□□□ -1.57
LINC02397-201ENST00000504409 SCAMP4Q969E2 229 aa5.22□□□□□ -1.57
LINC02397-201ENST00000504409 PARP12Q9H0J9 701 aaKnown RBP5.22□□□□□ -1.57
LINC02397-201ENST00000504409 TNFRSF12AQ9NP84 129 aa5.22□□□□□ -1.57
LINC02397-201ENST00000504409 K7ESF4 209 aa5.22□□□□□ -1.57
LINC02397-201ENST00000504409 DEFB125Q8N687 156 aa5.22□□□□□ -1.57
LINC02397-201ENST00000504409 SSMEM1Q8WWF3 244 aa5.22□□□□□ -1.57
LINC02397-201ENST00000504409 NEUROG3Q9Y4Z2 214 aa5.22□□□□□ -1.57
LINC02397-201ENST00000504409 MAGEA5P43359 124 aa5.22□□□□□ -1.57
LINC02397-201ENST00000504409 ADIPOQQ15848 244 aa5.22□□□□□ -1.57
LINC02397-201ENST00000504409 TRGV8A0A0C4DH27 118 aa5.22□□□□□ -1.57
LINC02397-201ENST00000504409 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.22□□□□□ -1.57
LINC02397-201ENST00000504409 OTPQ5XKR4 325 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms