RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 LINC00614P0C842 121 aa6.4□□□□□ -1.38
NEDD9-208ENST00000504387 FOLR3P41439 243 aa6.4□□□□□ -1.38
NEDD9-208ENST00000504387 RPL31P62899 125 aaKnown RBP6.4□□□□□ -1.38
NEDD9-208ENST00000504387 ABHD12Q8N2K0 398 aa6.4□□□□□ -1.38
NEDD9-208ENST00000504387 OR10D3Q8NH80 312 aa6.4□□□□□ -1.38
NEDD9-208ENST00000504387 TMEM54Q969K7 222 aa6.4□□□□□ -1.38
NEDD9-208ENST00000504387 AGMATQ9BSE5 352 aa6.4□□□□□ -1.38
NEDD9-208ENST00000504387 ALKBH7Q9BT30 221 aaPredicted RBP6.4□□□□□ -1.38
NEDD9-208ENST00000504387 PSMG3Q9BT73 122 aaPredicted RBP6.4□□□□□ -1.38
NEDD9-208ENST00000504387 SMG1Q96Q15 3661 aaKnown RBP6.4□□□□□ -1.38
NEDD9-208ENST00000504387 DYSFO75923 2080 aa6.4□□□□□ -1.38
NEDD9-208ENST00000504387 ZNF503-AS2A6NEH8 195 aa6.4□□□□□ -1.38
NEDD9-208ENST00000504387 GATA2P23769 480 aaPredicted RBP6.4□□□□□ -1.38
NEDD9-208ENST00000504387 FGF12P61328 243 aa6.4□□□□□ -1.38
NEDD9-208ENST00000504387 RBX1P62877 108 aa6.4□□□□□ -1.38
NEDD9-208ENST00000504387 PSG7Q13046 419 aa6.4□□□□□ -1.38
NEDD9-208ENST00000504387 LHFPL4Q7Z7J7 247 aa6.4□□□□□ -1.38
NEDD9-208ENST00000504387 STPG3Q8N7X2 389 aa6.4□□□□□ -1.38
NEDD9-208ENST00000504387 DCTN5Q9BTE1 182 aa6.4□□□□□ -1.38
NEDD9-208ENST00000504387 HES7Q9BYE0 225 aa6.4□□□□□ -1.38
NEDD9-208ENST00000504387 PARD6GQ9BYG4 376 aaPredicted RBP6.4□□□□□ -1.38
NEDD9-208ENST00000504387 UBE2ZQ9H832 354 aaPredicted RBP6.4□□□□□ -1.38
NEDD9-208ENST00000504387 TECRQ9NZ01 308 aaKnown RBP6.4□□□□□ -1.38
NEDD9-208ENST00000504387 SIT1Q9Y3P8 196 aa6.4□□□□□ -1.38
NEDD9-208ENST00000504387 SH2D7A6NKC9 451 aaPredicted RBP6.4□□□□□ -1.39
NEDD9-208ENST00000504387 CDIPTO14735 213 aa6.4□□□□□ -1.39
NEDD9-208ENST00000504387 IGLV2-14P01704 120 aa6.4□□□□□ -1.39
NEDD9-208ENST00000504387 OR10J4P0C629 311 aa6.4□□□□□ -1.39
NEDD9-208ENST00000504387 GFRA1P56159 465 aa6.4□□□□□ -1.39
NEDD9-208ENST00000504387 LDLRAD2Q5SZI1 272 aa6.4□□□□□ -1.39
NEDD9-208ENST00000504387 C10orf128Q5T292 105 aa6.4□□□□□ -1.39
NEDD9-208ENST00000504387 PRR27Q6MZM9 219 aa6.4□□□□□ -1.39
NEDD9-208ENST00000504387 WDR74Q6RFH5 385 aaPredicted RBP6.4□□□□□ -1.39
NEDD9-208ENST00000504387 MAFAQ8NHW3 353 aaPredicted RBP6.4□□□□□ -1.39
NEDD9-208ENST00000504387 ZNF596Q8TC21 504 aa6.4□□□□□ -1.39
NEDD9-208ENST00000504387 PMCHL2Q9BQD1 86 aa6.4□□□□□ -1.39
NEDD9-208ENST00000504387 NAA38Q9BRA0 125 aaKnown RBP6.4□□□□□ -1.39
NEDD9-208ENST00000504387 QTRT1Q9BXR0 403 aaKnown RBP6.4□□□□□ -1.39
NEDD9-208ENST00000504387 K7EN84 100 aa6.39□□□□□ -1.39
NEDD9-208ENST00000504387 C3orf79P0CE67 100 aa6.39□□□□□ -1.39
NEDD9-208ENST00000504387 LIFP15018 202 aa6.39□□□□□ -1.39
NEDD9-208ENST00000504387 AESQ08117 197 aa6.39□□□□□ -1.39
NEDD9-208ENST00000504387 FBXW9Q5XUX1 488 aa6.39□□□□□ -1.39
NEDD9-208ENST00000504387 TEX43Q6ZNM6 134 aa6.39□□□□□ -1.39
NEDD9-208ENST00000504387 ZNF826PQ6ZT77 177 aa6.39□□□□□ -1.39
NEDD9-208ENST00000504387 H2BFWTQ7Z2G1 175 aa6.39□□□□□ -1.39
NEDD9-208ENST00000504387 FAM58AQ8N1B3 248 aa6.39□□□□□ -1.39
NEDD9-208ENST00000504387 ZNF439Q8NDP4 499 aa6.39□□□□□ -1.39
NEDD9-208ENST00000504387 MRGPRDQ8TDS7 321 aa6.39□□□□□ -1.39
NEDD9-208ENST00000504387 LOXL4Q96JB6 756 aa6.39□□□□□ -1.39
NEDD9-208ENST00000504387 TMEM147Q9BVK8 224 aa6.39□□□□□ -1.39
NEDD9-208ENST00000504387 SSBP4Q9BWG4 385 aaPredicted RBP6.39□□□□□ -1.39
NEDD9-208ENST00000504387 HEYLQ9NQ87 328 aaPredicted RBP6.39□□□□□ -1.39
NEDD9-208ENST00000504387 RIF1Q5UIP0 2472 aaKnown RBP6.39□□□□□ -1.39
NEDD9-208ENST00000504387 COMPP49747 757 aaPredicted RBP6.39□□□□□ -1.39
NEDD9-208ENST00000504387 CAMPP49913 170 aa6.39□□□□□ -1.39
NEDD9-208ENST00000504387 DSCR4P56555 118 aaPredicted RBP6.39□□□□□ -1.39
NEDD9-208ENST00000504387 EDDM3AQ14507 147 aa6.39□□□□□ -1.39
NEDD9-208ENST00000504387 OR8B8Q15620 311 aa6.39□□□□□ -1.39
NEDD9-208ENST00000504387 PQLC2Q6ZP29 291 aa6.39□□□□□ -1.39
NEDD9-208ENST00000504387 MMD2Q8IY49 270 aa6.39□□□□□ -1.39
NEDD9-208ENST00000504387 AGBL5Q8NDL9 886 aa6.39□□□□□ -1.39
NEDD9-208ENST00000504387 OR4P4Q8NGL7 312 aa6.39□□□□□ -1.39
NEDD9-208ENST00000504387 OIT3Q8WWZ8 545 aa6.39□□□□□ -1.39
NEDD9-208ENST00000504387 HIPK2Q9H2X6 1198 aa6.39□□□□□ -1.39
NEDD9-208ENST00000504387 FZR1Q9UM11 496 aa6.39□□□□□ -1.39
NEDD9-208ENST00000504387 YTHDF2Q9Y5A9 579 aaKnown RBP6.39□□□□□ -1.39
NEDD9-208ENST00000504387 DMXL2Q8TDJ6 3036 aa6.39□□□□□ -1.39
NEDD9-208ENST00000504387 ATMQ13315 3056 aa6.39□□□□□ -1.39
NEDD9-208ENST00000504387 A0A1W2PN81 502 aa6.38□□□□□ -1.39
NEDD9-208ENST00000504387 DPRXA6NFQ7 191 aa6.38□□□□□ -1.39
NEDD9-208ENST00000504387 WNT9BO14905 357 aa6.38□□□□□ -1.39
NEDD9-208ENST00000504387 NXPH2O95156 264 aa6.38□□□□□ -1.39
NEDD9-208ENST00000504387 CELA3AP09093 270 aa6.38□□□□□ -1.39
NEDD9-208ENST00000504387 CRYBB3P26998 211 aa6.38□□□□□ -1.39
NEDD9-208ENST00000504387 GABRA2P47869 451 aa6.38□□□□□ -1.39
NEDD9-208ENST00000504387 TTC28Q96AY4 2481 aa6.38□□□□□ -1.39
NEDD9-208ENST00000504387 BORCS7Q96B45 105 aa6.38□□□□□ -1.39
NEDD9-208ENST00000504387 LINC00479Q96M42 142 aa6.38□□□□□ -1.39
NEDD9-208ENST00000504387 C20orf144Q9BQM9 153 aa6.38□□□□□ -1.39
NEDD9-208ENST00000504387 GP6Q9HCN6 339 aa6.38□□□□□ -1.39
NEDD9-208ENST00000504387 SEPSECSQ9HD40 501 aaKnown RBP6.38□□□□□ -1.39
NEDD9-208ENST00000504387 CLEC5AQ9NY25 188 aa6.38□□□□□ -1.39
NEDD9-208ENST00000504387 ARL2-SNX15V9GYD0 113 aa6.38□□□□□ -1.39
NEDD9-208ENST00000504387 RAB29O14966 203 aa6.38□□□□□ -1.39
NEDD9-208ENST00000504387 YPEL1O60688 119 aa6.38□□□□□ -1.39
NEDD9-208ENST00000504387 CER1O95813 267 aa6.38□□□□□ -1.39
NEDD9-208ENST00000504387 CGAP01215 116 aa6.38□□□□□ -1.39
NEDD9-208ENST00000504387 IGLV3-19P01714 112 aa6.38□□□□□ -1.39
NEDD9-208ENST00000504387 IGHV3-48P01763 117 aa6.38□□□□□ -1.39
NEDD9-208ENST00000504387 GPX1P07203 203 aa6.38□□□□□ -1.39
NEDD9-208ENST00000504387 TDGF1P13385 188 aa6.38□□□□□ -1.39
NEDD9-208ENST00000504387 MYOD1P15172 320 aa6.38□□□□□ -1.39
NEDD9-208ENST00000504387 EPHA8P29322 1005 aaPredicted RBP6.38□□□□□ -1.39
NEDD9-208ENST00000504387 ZNF83P51522 516 aa6.38□□□□□ -1.39
NEDD9-208ENST00000504387 RIPPLY3P57055 190 aa6.38□□□□□ -1.39
NEDD9-208ENST00000504387 RANP62826 216 aaKnown RBP6.38□□□□□ -1.39
NEDD9-208ENST00000504387 GAGE1Q13065 139 aa6.38□□□□□ -1.39
NEDD9-208ENST00000504387 TMEM42Q69YG0 159 aa6.38□□□□□ -1.39
NEDD9-208ENST00000504387 RNASEKQ6P5S7 137 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms