RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 ELOVL5Q9NYP7 299 aa12.44□□□□□ -0.42
SNF8-203ENST00000504000 A0A0U1RQK1 487 aa12.44□□□□□ -0.42
SNF8-203ENST00000504000 ZNF320A2RRD8 509 aa12.44□□□□□ -0.42
SNF8-203ENST00000504000 ITGB1BP1O14713 200 aa12.44□□□□□ -0.42
SNF8-203ENST00000504000 ST8SIA5O15466 376 aa12.44□□□□□ -0.42
SNF8-203ENST00000504000 PROP1O75360 226 aa12.44□□□□□ -0.42
SNF8-203ENST00000504000 PLA2G5P39877 138 aa12.44□□□□□ -0.42
SNF8-203ENST00000504000 GPR12P47775 334 aa12.44□□□□□ -0.42
SNF8-203ENST00000504000 RNFT1Q5M7Z0 435 aa12.44□□□□□ -0.42
SNF8-203ENST00000504000 CST9LP1Q5W188 147 aa12.44□□□□□ -0.42
SNF8-203ENST00000504000 MRPL41Q8IXM3 137 aaKnown RBP12.44□□□□□ -0.42
SNF8-203ENST00000504000 OR4A16Q8NH70 328 aa12.44□□□□□ -0.42
SNF8-203ENST00000504000 LSM4Q9Y4Z0 139 aaKnown RBP12.44□□□□□ -0.42
SNF8-203ENST00000504000 TRAV38-1A0A0B4J264 116 aa12.43□□□□□ -0.42
SNF8-203ENST00000504000 ZNF705GA8MUZ8 300 aaPredicted RBP12.43□□□□□ -0.42
SNF8-203ENST00000504000 GFRA3O60609 400 aa12.43□□□□□ -0.42
SNF8-203ENST00000504000 IGHG3P01860 377 aa12.43□□□□□ -0.42
SNF8-203ENST00000504000 SELENOTP62341 195 aa12.43□□□□□ -0.42
SNF8-203ENST00000504000 MBNL2Q5VZF2 373 aaKnown RBP12.43□□□□□ -0.42
SNF8-203ENST00000504000 MISP3Q96FF7 219 aa12.43□□□□□ -0.42
SNF8-203ENST00000504000 GGTLC1Q9BX51 225 aa12.43□□□□□ -0.42
SNF8-203ENST00000504000 NCOR1P1Q9H4R4 102 aa12.43□□□□□ -0.42
SNF8-203ENST00000504000 ARL2-SNX15V9GYD0 113 aa12.43□□□□□ -0.42
SNF8-203ENST00000504000 DOCK7Q96N67 2140 aa12.43□□□□□ -0.42
SNF8-203ENST00000504000 MDFIC2A0A1B0GVS7 189 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 FNDC10F2Z333 226 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 LYZL6O75951 148 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 ESDP10768 282 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 CFHR2P36980 270 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 EDDM3BP56851 147 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 CLEC12BQ2HXU8 276 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 MORN2Q502X0 79 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 GCSAMLQ5JQS6 135 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 PRAMEF5Q5TYX0 476 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 PRAMEF6Q5VXH4 476 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 SGMS2Q8NHU3 365 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 PPP1R35Q8TAP8 253 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 MGST2Q99735 147 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 NPVFQ9HCQ7 196 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 IL17BQ9UHF5 180 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 PTPRBP23467 1997 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 IGHV3-64DA0A0J9YX35 117 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 C9JCJ5 164 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 F2RL2O00254 374 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 CRYAAP02489 173 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 ARL14EPLP0DKL9 152 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 HOXC12P31275 282 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 PRDX2P32119 198 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 TIMP3P35625 211 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 ERVK-16P61578 105 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 RELBQ01201 579 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 SSX2Q16385 188 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 ZNF718Q3SXZ3 478 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 C1orf194Q5T5A4 169 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 CXorf67Q86X51 503 aaPredicted RBP12.42□□□□□ -0.42
SNF8-203ENST00000504000 C11orf52Q96A22 123 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 HEYLQ9NQ87 328 aaPredicted RBP12.42□□□□□ -0.42
SNF8-203ENST00000504000 FKBP11Q9NYL4 201 aa12.42□□□□□ -0.42
SNF8-203ENST00000504000 TRBV20OR9-2A0A075B6H5 130 aa12.41□□□□□ -0.42
SNF8-203ENST00000504000 TIMM8AO60220 97 aaPredicted RBP12.41□□□□□ -0.42
SNF8-203ENST00000504000 FCGR3BO75015 233 aa12.41□□□□□ -0.42
SNF8-203ENST00000504000 IGLV1-44P01699 117 aa12.41□□□□□ -0.42
SNF8-203ENST00000504000 C1QTNF9P0C862 333 aa12.41□□□□□ -0.42
SNF8-203ENST00000504000 DEFA4P12838 97 aa12.41□□□□□ -0.42
SNF8-203ENST00000504000 ERVFC1-1P60608 527 aa12.41□□□□□ -0.42
SNF8-203ENST00000504000 RPS16P62249 146 aaKnown RBP12.41□□□□□ -0.42
SNF8-203ENST00000504000 PAFAH1B2P68402 229 aa12.41□□□□□ -0.42
SNF8-203ENST00000504000 SPINK9Q5DT21 86 aa12.41□□□□□ -0.42
SNF8-203ENST00000504000 TEX38Q6PEX7 206 aa12.41□□□□□ -0.42
SNF8-203ENST00000504000 MRPL52Q86TS9 123 aaKnown RBP12.41□□□□□ -0.42
SNF8-203ENST00000504000 CD177Q8N6Q3 437 aa12.41□□□□□ -0.42
SNF8-203ENST00000504000 FAM169BQ8N8A8 192 aa12.41□□□□□ -0.42
SNF8-203ENST00000504000 CDX2Q99626 313 aaPredicted RBP12.41□□□□□ -0.42
SNF8-203ENST00000504000 DERL1Q9BUN8 251 aa12.41□□□□□ -0.42
SNF8-203ENST00000504000 METRNQ9UJH8 293 aa12.41□□□□□ -0.42
SNF8-203ENST00000504000 GTF3C1Q12789 2109 aa12.41□□□□□ -0.42
SNF8-203ENST00000504000 IGHV3-43A0A0B4J1X8 118 aa12.4□□□□□ -0.42
SNF8-203ENST00000504000 KIR2DL5BA0A0G2JN68 375 aa12.4□□□□□ -0.42
SNF8-203ENST00000504000 KIR2DL5BA0A0G2JPC4 375 aa12.4□□□□□ -0.42
SNF8-203ENST00000504000 MGST3O14880 152 aa12.4□□□□□ -0.42
SNF8-203ENST00000504000 MT-CO2P00403 227 aa12.4□□□□□ -0.42
SNF8-203ENST00000504000 IGHV3-43DP0DP04 118 aa12.4□□□□□ -0.42
SNF8-203ENST00000504000 AREGP15514 252 aa12.4□□□□□ -0.42
SNF8-203ENST00000504000 OR10J1P30954 320 aa12.4□□□□□ -0.42
SNF8-203ENST00000504000 LINC00205P59089 165 aa12.4□□□□□ -0.42
SNF8-203ENST00000504000 UBE2G2P60604 165 aa12.4□□□□□ -0.42
SNF8-203ENST00000504000 ARG2P78540 354 aa12.4□□□□□ -0.42
SNF8-203ENST00000504000 KIR2DL5AQ8N109 375 aa12.4□□□□□ -0.42
SNF8-203ENST00000504000 ZNF114Q8NC26 417 aa12.4□□□□□ -0.42
SNF8-203ENST00000504000 OR10G8Q8NGN5 311 aa12.4□□□□□ -0.42
SNF8-203ENST00000504000 RFESDQ8TAC1 157 aa12.4□□□□□ -0.42
SNF8-203ENST00000504000 MS4A5Q9H3V2 200 aa12.4□□□□□ -0.42
SNF8-203ENST00000504000 AHCTF1Q8WYP5 2266 aa12.4□□□□□ -0.42
SNF8-203ENST00000504000 SRRM5B3KS81 715 aa12.4□□□□□ -0.42
SNF8-203ENST00000504000 RRHO14718 337 aa12.4□□□□□ -0.42
SNF8-203ENST00000504000 RNF224P0DH78 156 aa12.4□□□□□ -0.42
SNF8-203ENST00000504000 NDUFB7P17568 137 aa12.4□□□□□ -0.42
SNF8-203ENST00000504000 GCH1P30793 250 aa12.4□□□□□ -0.42
SNF8-203ENST00000504000 RPL29P47914 159 aaKnown RBP12.4□□□□□ -0.42
SNF8-203ENST00000504000 LOXL3P58215 753 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms