RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 OR4S2Q8NH73 311 aa18.49■□□□□ 0.55
PCDH1-204ENST00000503492 RXFP4Q8TDU9 374 aa18.49■□□□□ 0.55
PCDH1-204ENST00000503492 RPUSD1Q9UJJ7 312 aaKnown RBP18.49■□□□□ 0.55
PCDH1-204ENST00000503492 LINC00312Q9Y6C7 94 aa18.49■□□□□ 0.55
PCDH1-204ENST00000503492 PPIAL4EA0A075B759 164 aa18.48■□□□□ 0.55
PCDH1-204ENST00000503492 PPIAL4DF5H284 164 aa18.48■□□□□ 0.55
PCDH1-204ENST00000503492 FBP1P09467 338 aa18.48■□□□□ 0.55
PCDH1-204ENST00000503492 PPIAL4FP0DN26 164 aa18.48■□□□□ 0.55
PCDH1-204ENST00000503492 ERVFRD-1P60508 538 aa18.48■□□□□ 0.55
PCDH1-204ENST00000503492 GNB2P62879 340 aa18.48■□□□□ 0.55
PCDH1-204ENST00000503492 CCL17Q92583 94 aa18.48■□□□□ 0.55
PCDH1-204ENST00000503492 SMCO4Q9NRQ5 59 aa18.48■□□□□ 0.55
PCDH1-204ENST00000503492 PPIAL4AQ9Y536 164 aa18.48■□□□□ 0.55
PCDH1-204ENST00000503492 THBS3P49746 956 aa18.48■□□□□ 0.55
PCDH1-204ENST00000503492 SPCS3P61009 180 aa18.48■□□□□ 0.55
PCDH1-204ENST00000503492 IGKV1D-33P01593 117 aa18.47■□□□□ 0.55
PCDH1-204ENST00000503492 IGKV1-33P01594 117 aa18.47■□□□□ 0.55
PCDH1-204ENST00000503492 PLA2G5P39877 138 aa18.47■□□□□ 0.55
PCDH1-204ENST00000503492 UCNP55089 124 aa18.47■□□□□ 0.55
PCDH1-204ENST00000503492 VWC2Q2TAL6 325 aa18.47■□□□□ 0.55
PCDH1-204ENST00000503492 ZNF787Q6DD87 383 aa18.47■□□□□ 0.55
PCDH1-204ENST00000503492 C1orf87Q8N0U7 546 aa18.47■□□□□ 0.55
PCDH1-204ENST00000503492 TMEM106BQ9NUM4 274 aa18.47■□□□□ 0.55
PCDH1-204ENST00000503492 H7C2Y5 167 aa18.47■□□□□ 0.55
PCDH1-204ENST00000503492 HSPB1P04792 205 aaKnown RBP18.47■□□□□ 0.55
PCDH1-204ENST00000503492 FGF7P21781 194 aa18.47■□□□□ 0.55
PCDH1-204ENST00000503492 FGF8P55075 233 aaPredicted RBP18.47■□□□□ 0.55
PCDH1-204ENST00000503492 TFF3Q07654 80 aa18.47■□□□□ 0.55
PCDH1-204ENST00000503492 TMEM30BQ3MIR4 351 aa18.47■□□□□ 0.55
PCDH1-204ENST00000503492 ACSM6Q6P461 480 aa18.47■□□□□ 0.55
PCDH1-204ENST00000503492 SLC25A48Q6ZT89 311 aaKnown RBP18.47■□□□□ 0.55
PCDH1-204ENST00000503492 OR52E5Q8NH55 327 aa18.47■□□□□ 0.55
PCDH1-204ENST00000503492 CLCC1Q96S66 551 aa18.47■□□□□ 0.55
PCDH1-204ENST00000503492 ZNRD1Q9P1U0 126 aa18.47■□□□□ 0.55
PCDH1-204ENST00000503492 GNG13Q9P2W3 67 aa18.47■□□□□ 0.55
PCDH1-204ENST00000503492 TET2Q6N021 2002 aaPredicted RBP18.47■□□□□ 0.55
PCDH1-204ENST00000503492 LOC102723971A0A1B0GUV8 181 aa18.46■□□□□ 0.55
PCDH1-204ENST00000503492 ZCCHC14Q8WYQ9 949 aaKnown RBP18.46■□□□□ 0.55
PCDH1-204ENST00000503492 PKDREJQ9NTG1 2253 aa18.46■□□□□ 0.55
PCDH1-204ENST00000503492 COLCA2A8K830 154 aa18.46■□□□□ 0.55
PCDH1-204ENST00000503492 ARG1P05089 322 aa18.46■□□□□ 0.55
PCDH1-204ENST00000503492 VDAC2P45880 294 aaPredicted RBP18.46■□□□□ 0.55
PCDH1-204ENST00000503492 RPL31P62899 125 aaKnown RBP18.46■□□□□ 0.55
PCDH1-204ENST00000503492 PDLIM3Q53GG5 364 aaPredicted RBP18.46■□□□□ 0.55
PCDH1-204ENST00000503492 KHDC3LQ587J8 217 aa18.46■□□□□ 0.55
PCDH1-204ENST00000503492 DYNLRB1Q9NP97 96 aa18.46■□□□□ 0.55
PCDH1-204ENST00000503492 TNFRSF13BO14836 293 aaPredicted RBP18.45■□□□□ 0.54
PCDH1-204ENST00000503492 EIF3GO75821 320 aaKnown RBP eCLIP18.45■□□□□ 0.54
PCDH1-204ENST00000503492 DAOP14920 347 aa18.45■□□□□ 0.54
PCDH1-204ENST00000503492 LYPD2Q6UXB3 125 aa18.45■□□□□ 0.54
PCDH1-204ENST00000503492 RPP25LQ8N5L8 163 aaKnown RBP18.45■□□□□ 0.54
PCDH1-204ENST00000503492 CYB561D1Q8N8Q1 229 aa18.45■□□□□ 0.54
PCDH1-204ENST00000503492 ADTRPQ96IZ2 230 aa18.45■□□□□ 0.54
PCDH1-204ENST00000503492 PUS1Q9Y606 427 aaKnown RBP eCLIP18.45■□□□□ 0.54
PCDH1-204ENST00000503492 SMG1Q96Q15 3661 aaKnown RBP18.45■□□□□ 0.54
PCDH1-204ENST00000503492 POLEQ07864 2286 aa18.45■□□□□ 0.54
PCDH1-204ENST00000503492 MDKP21741 143 aaPredicted RBP18.45■□□□□ 0.54
PCDH1-204ENST00000503492 CA7P43166 264 aa18.45■□□□□ 0.54
PCDH1-204ENST00000503492 CEBPGP53567 150 aa18.45■□□□□ 0.54
PCDH1-204ENST00000503492 MEF2CQ06413 473 aaPredicted RBP18.45■□□□□ 0.54
PCDH1-204ENST00000503492 RHOVQ96L33 236 aa18.45■□□□□ 0.54
PCDH1-204ENST00000503492 CCL3L1P16619 93 aa18.44■□□□□ 0.54
PCDH1-204ENST00000503492 ZNF429Q86V71 674 aa18.44■□□□□ 0.54
PCDH1-204ENST00000503492 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.44■□□□□ 0.54
PCDH1-204ENST00000503492 LY86O95711 162 aa18.44■□□□□ 0.54
PCDH1-204ENST00000503492 CASP6P55212 293 aa18.44■□□□□ 0.54
PCDH1-204ENST00000503492 OR4A47Q6IF82 309 aa18.44■□□□□ 0.54
PCDH1-204ENST00000503492 NPCDR1Q9BY65 106 aa18.44■□□□□ 0.54
PCDH1-204ENST00000503492 GAL3ST2Q9H3Q3 398 aa18.44■□□□□ 0.54
PCDH1-204ENST00000503492 UNKLQ9H9P5 680 aaKnown RBP18.44■□□□□ 0.54
PCDH1-204ENST00000503492 HEYLQ9NQ87 328 aaPredicted RBP18.44■□□□□ 0.54
PCDH1-204ENST00000503492 TCF19Q9Y242 345 aa18.44■□□□□ 0.54
PCDH1-204ENST00000503492 MAP1LC3B2A6NCE7 125 aa18.43■□□□□ 0.54
PCDH1-204ENST00000503492 ZFP92A6NM28 416 aa18.43■□□□□ 0.54
PCDH1-204ENST00000503492 CT45A6P0DMU7 189 aa18.43■□□□□ 0.54
PCDH1-204ENST00000503492 CT45A5P0DMU8 189 aa18.43■□□□□ 0.54
PCDH1-204ENST00000503492 CT45A7P0DMV0 189 aa18.43■□□□□ 0.54
PCDH1-204ENST00000503492 TMEM200BQ69YZ2 307 aa18.43■□□□□ 0.54
PCDH1-204ENST00000503492 LINC01560Q8TB33 94 aa18.43■□□□□ 0.54
PCDH1-204ENST00000503492 MAP1LC3BQ9GZQ8 125 aa18.43■□□□□ 0.54
PCDH1-204ENST00000503492 FAM90A27PA6NNH2 459 aa18.42■□□□□ 0.54
PCDH1-204ENST00000503492 C15orf61A6NNL5 157 aa18.42■□□□□ 0.54
PCDH1-204ENST00000503492 PLAUP00749 431 aa18.42■□□□□ 0.54
PCDH1-204ENST00000503492 IFNA10P01566 189 aa18.42■□□□□ 0.54
PCDH1-204ENST00000503492 RHEBQ15382 184 aa18.42■□□□□ 0.54
PCDH1-204ENST00000503492 FAM122CQ6P4D5 195 aa18.42■□□□□ 0.54
PCDH1-204ENST00000503492 MS4A5Q9H3V2 200 aa18.42■□□□□ 0.54
PCDH1-204ENST00000503492 ADGRG4Q8IZF6 3080 aa18.42■□□□□ 0.54
PCDH1-204ENST00000503492 ARFGEF3Q5TH69 2177 aa18.42■□□□□ 0.54
PCDH1-204ENST00000503492 RRHO14718 337 aa18.42■□□□□ 0.54
PCDH1-204ENST00000503492 CD3EP07766 207 aa18.42■□□□□ 0.54
PCDH1-204ENST00000503492 BCL2P10415 239 aa18.42■□□□□ 0.54
PCDH1-204ENST00000503492 APOBEC3AP31941 199 aaPredicted RBP18.42■□□□□ 0.54
PCDH1-204ENST00000503492 OR10A7Q8NGE5 316 aa18.42■□□□□ 0.54
PCDH1-204ENST00000503492 ZNF714Q96N38 554 aa18.42■□□□□ 0.54
PCDH1-204ENST00000503492 CISD1Q9NZ45 108 aaKnown RBP18.42■□□□□ 0.54
PCDH1-204ENST00000503492 PAX6P26367 422 aa18.41■□□□□ 0.54
PCDH1-204ENST00000503492 C15orf54Q8N8G6 183 aa18.41■□□□□ 0.54
PCDH1-204ENST00000503492 SLC39A9Q9NUM3 307 aa18.41■□□□□ 0.54
PCDH1-204ENST00000503492 CTSZQ9UBR2 303 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms