RNA–Protein interactions for RNA: ENST00000502221.2

AC055717.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC055717.1, Length 1,986 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.1-201ENST00000502221 PMS2P5A8MQ11 134 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 S1PR2O95136 353 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 NDUFB8O95169 186 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 ATXN8OSP0DMR3 200 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 TNFSF4P23510 183 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 CDKN1AP38936 164 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 LINC00310P59036 64 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 KRTDAPP60985 99 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 RAC1P63000 192 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 HTD2P86397 168 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 PSG4Q00888 419 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 PDCD1Q15116 288 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 WDR74Q6RFH5 385 aaPredicted RBP9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 STPG4Q8N801 248 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 OR5T1Q8NG75 326 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 RNASE8Q8TDE3 154 aaKnown RBP9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 THAP3Q8WTV1 239 aaPredicted RBP9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 BORCS7Q96B45 105 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 APH1AQ96BI3 265 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 UHRF2Q96PU4 802 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 OR6C1Q96RD1 312 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 SFXN3Q9BWM7 321 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 NRN1Q9NPD7 142 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 KCNIP1Q9NZI2 227 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 TBL2Q9Y4P3 447 aaKnown RBP9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 IGHV2-26A0A0B4J1V2 119 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 IGHV3-20A0A0C4DH32 117 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 DPRXA6NFQ7 191 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 RAB29O14966 203 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 OPRK1P41145 380 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 TFPI2P48307 235 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 RAC3P60763 192 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 RHOBP62745 196 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 CATR1Q13166 79 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 FAM162BQ5T6X4 162 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 OR4C5Q8NGB2 326 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 GATAD1Q8WUU5 269 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 C11orf52Q96A22 123 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 ZNF501Q96CX3 271 aaPredicted RBP9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 MRPL27Q9P0M9 148 aaKnown RBP9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 FBXL7Q9UJT9 491 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 WDR83OSQ9Y284 106 aa9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 RBM7Q9Y580 266 aaKnown RBP9.26□□□□□ -0.93
AC055717.1-201ENST00000502221 TRGV10A0A0A0MS01 117 aa9.25□□□□□ -0.93
AC055717.1-201ENST00000502221 HLA-DQA1P01909 254 aa9.25□□□□□ -0.93
AC055717.1-201ENST00000502221 AREGP15514 252 aa9.25□□□□□ -0.93
AC055717.1-201ENST00000502221 AMTP48728 403 aa9.25□□□□□ -0.93
AC055717.1-201ENST00000502221 DUSP3P51452 185 aaPredicted RBP9.25□□□□□ -0.93
AC055717.1-201ENST00000502221 RASL11AQ6T310 242 aa9.25□□□□□ -0.93
AC055717.1-201ENST00000502221 Q8N976 141 aa9.25□□□□□ -0.93
AC055717.1-201ENST00000502221 CPEB3Q8NE35 698 aaKnown RBP9.25□□□□□ -0.93
AC055717.1-201ENST00000502221 APOBEC3DQ96AK3 386 aaPredicted RBP9.25□□□□□ -0.93
AC055717.1-201ENST00000502221 FOXB1Q99853 325 aa9.25□□□□□ -0.93
AC055717.1-201ENST00000502221 DEFB126Q9BYW3 111 aa9.25□□□□□ -0.93
AC055717.1-201ENST00000502221 FGF21Q9NSA1 209 aa9.25□□□□□ -0.93
AC055717.1-201ENST00000502221 IGSF10Q6WRI0 2623 aa9.25□□□□□ -0.93
AC055717.1-201ENST00000502221 BAHCC1Q9P281 2608 aa9.25□□□□□ -0.93
AC055717.1-201ENST00000502221 UNC13CQ8NB66 2214 aa9.25□□□□□ -0.93
AC055717.1-201ENST00000502221 OR5B21A6NL26 309 aa9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 SNURFLB1AK76 121 aa9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 ZNF324O75467 553 aaPredicted RBP9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 P0C879 139 aa9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 CBLN1P23435 193 aa9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 TSPOP30536 169 aa9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 PMP22Q01453 160 aa9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 FBLN7Q53RD9 439 aa9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 STUMQ69YW2 141 aa9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 TCF23Q7RTU1 214 aa9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 GPHA2Q96T91 129 aa9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 PKIBQ9C010 78 aa9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 FAM90A9PA6NNJ1 464 aa9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 CDIPTO14735 213 aa9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 HMGB3O15347 200 aaKnown RBP9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 RBFOX2O43251 390 aaKnown RBP eCLIP9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 NXPH2O95156 264 aa9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 IGLV2-14P01704 120 aa9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 STAG3L2P0CL84 134 aa9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 STAG3L3P0CL85 134 aa9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 RPS19BP1Q86WX3 136 aaKnown RBP9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 MCEMP1Q8IX19 187 aa9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 Q8IYB0 196 aa9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 OR4P4Q8NGL7 312 aa9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 OCC1Q8TAD7 63 aa9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 MTCH1Q9NZJ7 389 aa9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 PPP1R3CQ9UQK1 317 aa9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 MPC1Q9Y5U8 109 aa9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 CHCHD2Q9Y6H1 151 aaPredicted RBP9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 SHANK1Q9Y566 2161 aa9.24□□□□□ -0.93
AC055717.1-201ENST00000502221 IGHV5-10-1A0A0J9YXX1 117 aa9.23□□□□□ -0.93
AC055717.1-201ENST00000502221 A0A1B0GUS0 222 aa9.23□□□□□ -0.93
AC055717.1-201ENST00000502221 J3QR06 171 aa9.23□□□□□ -0.93
AC055717.1-201ENST00000502221 NTN3O00634 580 aaPredicted RBP9.23□□□□□ -0.93
AC055717.1-201ENST00000502221 TRAPPC6AO75865 159 aa9.23□□□□□ -0.93
AC055717.1-201ENST00000502221 TOX4O94842 621 aa9.23□□□□□ -0.93
AC055717.1-201ENST00000502221 CLDN14O95500 239 aa9.23□□□□□ -0.93
AC055717.1-201ENST00000502221 LIFP15018 202 aa9.23□□□□□ -0.93
AC055717.1-201ENST00000502221 ATP5G3P48201 142 aa9.23□□□□□ -0.93
AC055717.1-201ENST00000502221 CX3CL1P78423 397 aa9.23□□□□□ -0.93
AC055717.1-201ENST00000502221 RHOGP84095 191 aa9.23□□□□□ -0.93
AC055717.1-201ENST00000502221 AAED1Q7RTV5 226 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms