RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 SOCS1O15524 211 aa11.49□□□□□ -0.57
HDAC6-236ENST00000498808 XRCC3O43542 346 aa11.49□□□□□ -0.57
HDAC6-236ENST00000498808 CRYZL1O95825 349 aa11.49□□□□□ -0.57
HDAC6-236ENST00000498808 IFNA4P05014 189 aa11.49□□□□□ -0.57
HDAC6-236ENST00000498808 CD3GP09693 182 aa11.49□□□□□ -0.57
HDAC6-236ENST00000498808 TAGLNQ01995 201 aaKnown RBP11.49□□□□□ -0.57
HDAC6-236ENST00000498808 GLT8D1Q68CQ7 371 aa11.49□□□□□ -0.57
HDAC6-236ENST00000498808 SLC38A6Q8IZM9 456 aa11.49□□□□□ -0.57
HDAC6-236ENST00000498808 CBR4Q8N4T8 237 aa11.49□□□□□ -0.57
HDAC6-236ENST00000498808 GVQW1Q8N7I0 195 aa11.49□□□□□ -0.57
HDAC6-236ENST00000498808 FANCD2OSQ96PS1 177 aa11.49□□□□□ -0.57
HDAC6-236ENST00000498808 MFFQ9GZY8 342 aa11.49□□□□□ -0.57
HDAC6-236ENST00000498808 MAP6D1Q9H9H5 199 aa11.49□□□□□ -0.57
HDAC6-236ENST00000498808 ZNF257Q9Y2Q1 563 aa11.49□□□□□ -0.57
HDAC6-236ENST00000498808 LOC100130705A0A1B0GUX0 176 aa11.48□□□□□ -0.57
HDAC6-236ENST00000498808 TMEM14DPA8MWL7 114 aa11.48□□□□□ -0.57
HDAC6-236ENST00000498808 TEX22C9J3V5 150 aa11.48□□□□□ -0.57
HDAC6-236ENST00000498808 SAA1P0DJI8 122 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-236ENST00000498808 RRASP10301 218 aa11.48□□□□□ -0.57
HDAC6-236ENST00000498808 SRMP19623 302 aa11.48□□□□□ -0.57
HDAC6-236ENST00000498808 QRFPP83859 136 aa11.48□□□□□ -0.57
HDAC6-236ENST00000498808 ZNF585BQ52M93 769 aa11.48□□□□□ -0.57
HDAC6-236ENST00000498808 C1orf100Q5SVJ3 147 aa11.48□□□□□ -0.57
HDAC6-236ENST00000498808 SLC25A42Q86VD7 318 aa11.48□□□□□ -0.57
HDAC6-236ENST00000498808 MARC2Q969Z3 335 aa11.48□□□□□ -0.57
HDAC6-236ENST00000498808 SPAG8Q99932 426 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-236ENST00000498808 C12orf4Q9NQ89 552 aa11.48□□□□□ -0.57
HDAC6-236ENST00000498808 DIMT1Q9UNQ2 313 aaKnown RBP11.48□□□□□ -0.57
HDAC6-236ENST00000498808 HSPG2P98160 4391 aa11.48□□□□□ -0.57
HDAC6-236ENST00000498808 ACTL6BO94805 426 aa11.47□□□□□ -0.57
HDAC6-236ENST00000498808 MYL12AP19105 171 aa11.47□□□□□ -0.57
HDAC6-236ENST00000498808 CDK10Q15131 360 aa11.47□□□□□ -0.57
HDAC6-236ENST00000498808 PYDC1Q8WXC3 89 aa11.47□□□□□ -0.57
HDAC6-236ENST00000498808 LPAR5Q9H1C0 372 aa11.47□□□□□ -0.57
HDAC6-236ENST00000498808 C11orf68Q9H3H3 251 aaKnown RBP11.47□□□□□ -0.57
HDAC6-236ENST00000498808 MRPL27Q9P0M9 148 aaKnown RBP11.47□□□□□ -0.57
HDAC6-236ENST00000498808 LINC00473A8K010 186 aa11.46□□□□□ -0.57
HDAC6-236ENST00000498808 NPIPB5A8MRT5 1133 aa11.46□□□□□ -0.57
HDAC6-236ENST00000498808 FOXI3A8MTJ6 420 aaPredicted RBP11.46□□□□□ -0.57
HDAC6-236ENST00000498808 TRDCB7Z8K6 153 aa11.46□□□□□ -0.57
HDAC6-236ENST00000498808 E7EUB6 86 aa11.46□□□□□ -0.57
HDAC6-236ENST00000498808 TSPAN4O14817 238 aa11.46□□□□□ -0.57
HDAC6-236ENST00000498808 DUTP33316 252 aaKnown RBP11.46□□□□□ -0.57
HDAC6-236ENST00000498808 INSL4Q14641 139 aa11.46□□□□□ -0.57
HDAC6-236ENST00000498808 LRRTM1Q86UE6 522 aa11.46□□□□□ -0.57
HDAC6-236ENST00000498808 MMD2Q8IY49 270 aa11.46□□□□□ -0.57
HDAC6-236ENST00000498808 OSR1Q8TAX0 266 aaPredicted RBP11.46□□□□□ -0.57
HDAC6-236ENST00000498808 GALNT14Q96FL9 552 aa11.46□□□□□ -0.57
HDAC6-236ENST00000498808 RARRES2Q99969 163 aa11.46□□□□□ -0.57
HDAC6-236ENST00000498808 C5orf66Q9H5L9 145 aa11.46□□□□□ -0.57
HDAC6-236ENST00000498808 A0A1B0GW64 132 aa11.45□□□□□ -0.58
HDAC6-236ENST00000498808 PRSS29PA6NIE9 313 aa11.45□□□□□ -0.58
HDAC6-236ENST00000498808 IGLL5B9A064 214 aa11.45□□□□□ -0.58
HDAC6-236ENST00000498808 BET1O15155 118 aa11.45□□□□□ -0.58
HDAC6-236ENST00000498808 CREBL2O60519 120 aaPredicted RBP11.45□□□□□ -0.58
HDAC6-236ENST00000498808 IL6RP08887 468 aaPredicted RBP11.45□□□□□ -0.58
HDAC6-236ENST00000498808 SERPINB10P48595 397 aa11.45□□□□□ -0.58
HDAC6-236ENST00000498808 TMEM50BP56557 158 aa11.45□□□□□ -0.58
HDAC6-236ENST00000498808 IGSF11Q5DX21 431 aa11.45□□□□□ -0.58
HDAC6-236ENST00000498808 OR4A4PQ8NGN8 299 aa11.45□□□□□ -0.58
HDAC6-236ENST00000498808 OR5B3Q8NH48 314 aa11.45□□□□□ -0.58
HDAC6-236ENST00000498808 EEF1AKMT3Q96AZ1 226 aa11.45□□□□□ -0.58
HDAC6-236ENST00000498808 CMSS1Q9BQ75 279 aaKnown RBP11.45□□□□□ -0.58
HDAC6-236ENST00000498808 CABLES2Q9BTV7 478 aa11.45□□□□□ -0.58
HDAC6-236ENST00000498808 HSF4Q9ULV5 492 aa11.45□□□□□ -0.58
HDAC6-236ENST00000498808 IGHV3-35A0A0C4DH35 117 aa11.44□□□□□ -0.58
HDAC6-236ENST00000498808 MFSD2BA6NFX1 497 aa11.44□□□□□ -0.58
HDAC6-236ENST00000498808 RTL8CO15255 209 aa11.44□□□□□ -0.58
HDAC6-236ENST00000498808 FABP7O15540 132 aa11.44□□□□□ -0.58
HDAC6-236ENST00000498808 CELP19835 753 aa11.44□□□□□ -0.58
HDAC6-236ENST00000498808 GALP22466 123 aa11.44□□□□□ -0.58
HDAC6-236ENST00000498808 MFAP2P55001 183 aa11.44□□□□□ -0.58
HDAC6-236ENST00000498808 TAS2R43P59537 309 aa11.44□□□□□ -0.58
HDAC6-236ENST00000498808 MED21Q13503 144 aa11.44□□□□□ -0.58
HDAC6-236ENST00000498808 TPBGQ13641 420 aa11.44□□□□□ -0.58
HDAC6-236ENST00000498808 MED22Q15528 200 aa11.44□□□□□ -0.58
HDAC6-236ENST00000498808 KLK9Q2XQG4 91 aa11.44□□□□□ -0.58
HDAC6-236ENST00000498808 FAM89BQ8N5H3 189 aa11.44□□□□□ -0.58
HDAC6-236ENST00000498808 ARHGAP5-AS1Q96IT6 56 aa11.44□□□□□ -0.58
HDAC6-236ENST00000498808 ADTRPQ96IZ2 230 aa11.44□□□□□ -0.58
HDAC6-236ENST00000498808 FYTTD1Q96QD9 318 aaKnown RBP11.44□□□□□ -0.58
HDAC6-236ENST00000498808 KLK9Q9UKQ9 250 aa11.44□□□□□ -0.58
HDAC6-236ENST00000498808 TRBV6-7A0A0A0MS04 114 aa11.43□□□□□ -0.58
HDAC6-236ENST00000498808 IRGMA1A4Y4 181 aa11.43□□□□□ -0.58
HDAC6-236ENST00000498808 DEFB4AO15263 64 aa11.43□□□□□ -0.58
HDAC6-236ENST00000498808 CLEC3BP05452 202 aa11.43□□□□□ -0.58
HDAC6-236ENST00000498808 CRYGCP07315 174 aa11.43□□□□□ -0.58
HDAC6-236ENST00000498808 AREGP15514 252 aa11.43□□□□□ -0.58
HDAC6-236ENST00000498808 MAPK3P27361 379 aaPredicted RBP11.43□□□□□ -0.58
HDAC6-236ENST00000498808 ELLP55199 621 aaPredicted RBP11.43□□□□□ -0.58
HDAC6-236ENST00000498808 TTC23Q5W5X9 447 aa11.43□□□□□ -0.58
HDAC6-236ENST00000498808 SETD9Q8NE22 299 aa11.43□□□□□ -0.58
HDAC6-236ENST00000498808 OR11H2Q8NH07 326 aa11.43□□□□□ -0.58
HDAC6-236ENST00000498808 TMEM80Q96HE8 168 aa11.43□□□□□ -0.58
HDAC6-236ENST00000498808 PECRQ9BY49 303 aa11.43□□□□□ -0.58
HDAC6-236ENST00000498808 CSTL1Q9H114 145 aa11.43□□□□□ -0.58
HDAC6-236ENST00000498808 SLC2A9Q9NRM0 540 aa11.43□□□□□ -0.58
HDAC6-236ENST00000498808 UFC1Q9Y3C8 167 aa11.43□□□□□ -0.58
HDAC6-236ENST00000498808 DPPA5A6NC42 116 aa11.42□□□□□ -0.58
HDAC6-236ENST00000498808 BPNT1O95861 308 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms