RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 RPL39P5Q59GN2 51 aa6.23□□□□□ -1.41
CDC42-205ENST00000498236 DHRS7BQ6IAN0 325 aaPredicted RBP6.23□□□□□ -1.41
CDC42-205ENST00000498236 BTNL3Q6UXE8 466 aa6.23□□□□□ -1.41
CDC42-205ENST00000498236 TMUB2Q71RG4 321 aa6.23□□□□□ -1.41
CDC42-205ENST00000498236 LYG1Q8N1E2 194 aa6.23□□□□□ -1.41
CDC42-205ENST00000498236 FAM71E2Q8N5Q1 922 aa6.23□□□□□ -1.41
CDC42-205ENST00000498236 INO80EQ8NBZ0 244 aaPredicted RBP6.23□□□□□ -1.41
CDC42-205ENST00000498236 BEND2Q8NDZ0 799 aa6.23□□□□□ -1.41
CDC42-205ENST00000498236 OR1S1Q8NH92 325 aa6.23□□□□□ -1.41
CDC42-205ENST00000498236 ST6GALNAC6Q969X2 333 aa6.23□□□□□ -1.41
CDC42-205ENST00000498236 TMEM186Q96B77 213 aa6.23□□□□□ -1.41
CDC42-205ENST00000498236 GPR146Q96CH1 333 aa6.23□□□□□ -1.41
CDC42-205ENST00000498236 RRNAD1Q96FB5 475 aaKnown RBP6.23□□□□□ -1.41
CDC42-205ENST00000498236 C11orf1Q9H5F2 150 aa6.23□□□□□ -1.41
CDC42-205ENST00000498236 TMEM140Q9NV12 185 aa6.23□□□□□ -1.41
CDC42-205ENST00000498236 OR5AC2Q9NZP5 309 aa6.23□□□□□ -1.41
CDC42-205ENST00000498236 CACFD1Q9UGQ2 172 aa6.23□□□□□ -1.41
CDC42-205ENST00000498236 NSG2Q9Y328 171 aa6.23□□□□□ -1.41
CDC42-205ENST00000498236 SPTAN1Q13813 2472 aaKnown RBP6.23□□□□□ -1.41
CDC42-205ENST00000498236 LRRK2Q5S007 2527 aa6.23□□□□□ -1.41
CDC42-205ENST00000498236 MALRD1Q5VYJ5 2156 aa6.23□□□□□ -1.41
CDC42-205ENST00000498236 A0A0G2JRQ6 117 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 A0A1W2PPE3 182 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 VWC2LB2RUY7 222 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 J3QKU1 62 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 TOR1AO14656 332 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 S1PR2O95136 353 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 IGLV1-47P01700 117 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 IGHV3-7P01780 117 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 AMY1AP04745 511 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 CT45A6P0DMU7 189 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 CT45A5P0DMU8 189 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 CT45A7P0DMV0 189 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 RRASP10301 218 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 IL3RAP26951 378 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 SSTR2P30874 369 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 NUP62P37198 522 aaPredicted RBP6.22□□□□□ -1.41
CDC42-205ENST00000498236 P2RY1P47900 373 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 GNG10P50151 68 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 AKR1C2P52895 323 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 DSCR9P59020 149 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 S100A10P60903 97 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 LMO4P61968 165 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 PAX2Q02962 417 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 POU2AF1Q16633 256 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 RNF151Q2KHN1 245 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 GPR157Q5UAW9 335 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 Q6ZRM9 215 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 ZNF767PQ75MW2 155 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 ABHD12Q8N2K0 398 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 ZNF525Q8N782 197 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 ZNF383Q8NA42 475 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 DMBX1Q8NFW5 382 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 OR10X1Q8NGY0 326 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 OR4S2Q8NH73 311 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 C10orf105Q8TEF2 133 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 DCUN1D4Q92564 292 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 PCGF1Q9BSM1 259 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 BPESC1Q9GZL8 116 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 ARL6Q9H0F7 186 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 RCL1Q9Y2P8 373 aaKnown RBP6.22□□□□□ -1.41
CDC42-205ENST00000498236 KPTNQ9Y664 436 aa6.22□□□□□ -1.41
CDC42-205ENST00000498236 USF3Q68DE3 2245 aa6.21□□□□□ -1.42
CDC42-205ENST00000498236 DCHS2Q6V1P9 2916 aa6.21□□□□□ -1.42
CDC42-205ENST00000498236 IGHV2-26A0A0B4J1V2 119 aa6.21□□□□□ -1.42
CDC42-205ENST00000498236 MARCH11A6NNE9 402 aa6.21□□□□□ -1.42
CDC42-205ENST00000498236 TAAR5O14804 337 aa6.21□□□□□ -1.42
CDC42-205ENST00000498236 BCL2L11O43521 198 aa6.21□□□□□ -1.42
CDC42-205ENST00000498236 ENSAO43768 121 aaKnown RBP6.21□□□□□ -1.42
CDC42-205ENST00000498236 FCGR3BO75015 233 aa6.21□□□□□ -1.42
CDC42-205ENST00000498236 KRASP01116 189 aa6.21□□□□□ -1.42
CDC42-205ENST00000498236 HKR1P10072 659 aa6.21□□□□□ -1.42
CDC42-205ENST00000498236 NQO2P16083 231 aa6.21□□□□□ -1.42
CDC42-205ENST00000498236 PVALBP20472 110 aaPredicted RBP6.21□□□□□ -1.42
CDC42-205ENST00000498236 PRTN3P24158 256 aa6.21□□□□□ -1.42
CDC42-205ENST00000498236 PRRX1P54821 245 aa6.21□□□□□ -1.42
CDC42-205ENST00000498236 ZNF816Q0VGE8 651 aaPredicted RBP6.21□□□□□ -1.42
CDC42-205ENST00000498236 RTL8BQ17RB0 113 aa6.21□□□□□ -1.42
CDC42-205ENST00000498236 HLA-DRB5Q30154 266 aa6.21□□□□□ -1.42
CDC42-205ENST00000498236 MIDNQ504T8 468 aa6.21□□□□□ -1.42
CDC42-205ENST00000498236 PDLIM3Q53GG5 364 aaPredicted RBP6.21□□□□□ -1.42
CDC42-205ENST00000498236 CXorf66Q5JRM2 361 aaPredicted RBP6.21□□□□□ -1.42
CDC42-205ENST00000498236 LCE5AQ5TCM9 118 aa6.21□□□□□ -1.42
CDC42-205ENST00000498236 TEX261Q6UWH6 196 aa6.21□□□□□ -1.42
CDC42-205ENST00000498236 SLC51BQ86UW2 128 aa6.21□□□□□ -1.42
CDC42-205ENST00000498236 Q8N7P7 452 aa6.21□□□□□ -1.42
CDC42-205ENST00000498236 OR11H6Q8NGC7 330 aa6.21□□□□□ -1.42
CDC42-205ENST00000498236 OR13D1Q8NGV5 346 aa6.21□□□□□ -1.42
CDC42-205ENST00000498236 CLDND2Q8NHS1 167 aa6.21□□□□□ -1.42
CDC42-205ENST00000498236 RNASE11Q8TAA1 199 aaKnown RBP6.21□□□□□ -1.42
CDC42-205ENST00000498236 R3HDM4Q96D70 268 aa6.21□□□□□ -1.42
CDC42-205ENST00000498236 RAB40CQ96S21 281 aa6.21□□□□□ -1.42
CDC42-205ENST00000498236 AIFM2Q9BRQ8 373 aa6.21□□□□□ -1.42
CDC42-205ENST00000498236 PIMREGQ9BSJ6 248 aa6.21□□□□□ -1.42
CDC42-205ENST00000498236 CLEC7AQ9BXN2 247 aa6.21□□□□□ -1.42
CDC42-205ENST00000498236 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.21□□□□□ -1.42
CDC42-205ENST00000498236 HSPB7Q9UBY9 170 aa6.21□□□□□ -1.42
CDC42-205ENST00000498236 CACNG5Q9UF02 275 aa6.21□□□□□ -1.42
CDC42-205ENST00000498236 PAIP2BQ9ULR5 123 aaKnown RBP6.21□□□□□ -1.42
CDC42-205ENST00000498236 AMMECR1Q9Y4X0 333 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms