RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 RAMP3O60896 148 aa16.1■□□□□ 0.17
ACTN4-208ENST00000497637 IGHV3-7P01780 117 aa16.1■□□□□ 0.17
ACTN4-208ENST00000497637 POLR2GP62487 172 aaKnown RBP eCLIP16.1■□□□□ 0.17
ACTN4-208ENST00000497637 ZNF816Q0VGE8 651 aaPredicted RBP16.1■□□□□ 0.17
ACTN4-208ENST00000497637 RPL39P5Q59GN2 51 aa16.1■□□□□ 0.17
ACTN4-208ENST00000497637 AVPI1Q5T686 147 aa16.1■□□□□ 0.17
ACTN4-208ENST00000497637 OR8H3Q8N146 312 aa16.1■□□□□ 0.17
ACTN4-208ENST00000497637 C8orf31Q8N9H6 132 aa16.1■□□□□ 0.17
ACTN4-208ENST00000497637 NEIL1Q96FI4 390 aaPredicted RBP16.1■□□□□ 0.17
ACTN4-208ENST00000497637 ZNF251Q9BRH9 671 aa16.1■□□□□ 0.17
ACTN4-208ENST00000497637 ZC4H2Q9NQZ6 224 aa16.1■□□□□ 0.17
ACTN4-208ENST00000497637 TRRAPQ9Y4A5 3859 aa16.1■□□□□ 0.17
ACTN4-208ENST00000497637 DSCAML1Q8TD84 2053 aa16.09■□□□□ 0.17
ACTN4-208ENST00000497637 A0A1W2PPE3 182 aa16.09■□□□□ 0.17
ACTN4-208ENST00000497637 RPS10-NUDT3A0A1W2PQS6 291 aa16.09■□□□□ 0.17
ACTN4-208ENST00000497637 PPIHO43447 177 aaKnown RBP16.09■□□□□ 0.17
ACTN4-208ENST00000497637 S1PR2O95136 353 aa16.09■□□□□ 0.17
ACTN4-208ENST00000497637 THBS3P49746 956 aa16.09■□□□□ 0.17
ACTN4-208ENST00000497637 MIDNQ504T8 468 aa16.09■□□□□ 0.17
ACTN4-208ENST00000497637 OR2B11Q5JQS5 317 aa16.09■□□□□ 0.17
ACTN4-208ENST00000497637 LINC00311Q8N616 119 aa16.09■□□□□ 0.17
ACTN4-208ENST00000497637 OR8B3Q8NGG8 313 aa16.09■□□□□ 0.17
ACTN4-208ENST00000497637 ZNF596Q8TC21 504 aa16.09■□□□□ 0.17
ACTN4-208ENST00000497637 DDB2Q92466 427 aa16.09■□□□□ 0.17
ACTN4-208ENST00000497637 PHYHIPLQ96FC7 376 aa16.09■□□□□ 0.17
ACTN4-208ENST00000497637 OR8B2Q96RD0 313 aa16.09■□□□□ 0.17
ACTN4-208ENST00000497637 PRELID3BQ9Y3B1 194 aa16.09■□□□□ 0.17
ACTN4-208ENST00000497637 IGHV4-61A0A0C4DH41 118 aa16.08■□□□□ 0.16
ACTN4-208ENST00000497637 FAM90A26D6RGX4 464 aa16.08■□□□□ 0.16
ACTN4-208ENST00000497637 SPDEFO95238 335 aa16.08■□□□□ 0.16
ACTN4-208ENST00000497637 HPRT1P00492 218 aa16.08■□□□□ 0.16
ACTN4-208ENST00000497637 LINC00205P59089 165 aa16.08■□□□□ 0.16
ACTN4-208ENST00000497637 RAB14P61106 215 aa16.08■□□□□ 0.16
ACTN4-208ENST00000497637 VAMP2P63027 116 aa16.08■□□□□ 0.16
ACTN4-208ENST00000497637 EIF5AP63241 154 aaKnown RBP16.08■□□□□ 0.16
ACTN4-208ENST00000497637 IZUMO4Q1ZYL8 232 aa16.08■□□□□ 0.16
ACTN4-208ENST00000497637 C1orf229Q6ZS94 237 aaPredicted RBP16.08■□□□□ 0.16
ACTN4-208ENST00000497637 LYG1Q8N1E2 194 aa16.08■□□□□ 0.16
ACTN4-208ENST00000497637 C8orf46Q8TAG6 207 aa16.08■□□□□ 0.16
ACTN4-208ENST00000497637 ZNF418Q8TF45 676 aaPredicted RBP16.08■□□□□ 0.16
ACTN4-208ENST00000497637 S1PR3Q99500 378 aa16.08■□□□□ 0.16
ACTN4-208ENST00000497637 NBEAL2Q6ZNJ1 2754 aa16.08■□□□□ 0.16
ACTN4-208ENST00000497637 A0A087X0M5 115 aa16.07■□□□□ 0.16
ACTN4-208ENST00000497637 SAA2-SAA4A0A096LPE2 208 aa16.07■□□□□ 0.16
ACTN4-208ENST00000497637 A0A1B0GX30 115 aa16.07■□□□□ 0.16
ACTN4-208ENST00000497637 LINC00862A6NCI5 91 aa16.07■□□□□ 0.16
ACTN4-208ENST00000497637 TRIM77I1YAP6 450 aa16.07■□□□□ 0.16
ACTN4-208ENST00000497637 WRBO00258 174 aa16.07■□□□□ 0.16
ACTN4-208ENST00000497637 TOR1AO14656 332 aa16.07■□□□□ 0.16
ACTN4-208ENST00000497637 LY6HO94772 140 aa16.07■□□□□ 0.16
ACTN4-208ENST00000497637 SAA2P0DJI9 122 aaPredicted RBP16.07■□□□□ 0.16
ACTN4-208ENST00000497637 TPT1P13693 172 aaKnown RBP16.07■□□□□ 0.16
ACTN4-208ENST00000497637 G6PCP35575 357 aa16.07■□□□□ 0.16
ACTN4-208ENST00000497637 GNG10P50151 68 aa16.07■□□□□ 0.16
ACTN4-208ENST00000497637 WDR25Q64LD2 544 aaPredicted RBP16.07■□□□□ 0.16
ACTN4-208ENST00000497637 HIST2H2BDQ6DRA6 164 aa16.07■□□□□ 0.16
ACTN4-208ENST00000497637 SHISA2Q6UWI4 295 aa16.07■□□□□ 0.16
ACTN4-208ENST00000497637 ALKAL2Q6UX46 152 aa16.07■□□□□ 0.16
ACTN4-208ENST00000497637 OR2C3Q8N628 320 aa16.07■□□□□ 0.16
ACTN4-208ENST00000497637 RAB40CQ96S21 281 aa16.07■□□□□ 0.16
ACTN4-208ENST00000497637 MAGT1Q9H0U3 335 aa16.07■□□□□ 0.16
ACTN4-208ENST00000497637 CHST1O43916 411 aa16.06■□□□□ 0.16
ACTN4-208ENST00000497637 SSSCA1O60232 199 aa16.06■□□□□ 0.16
ACTN4-208ENST00000497637 FCGR3BO75015 233 aa16.06■□□□□ 0.16
ACTN4-208ENST00000497637 KRASP01116 189 aa16.06■□□□□ 0.16
ACTN4-208ENST00000497637 GAPDHP04406 335 aaKnown RBP16.06■□□□□ 0.16
ACTN4-208ENST00000497637 ARHGDIBP52566 201 aa16.06■□□□□ 0.16
ACTN4-208ENST00000497637 ERVFRD-1P60508 538 aa16.06■□□□□ 0.16
ACTN4-208ENST00000497637 C11orf42Q8N5U0 333 aa16.06■□□□□ 0.16
ACTN4-208ENST00000497637 SLC25A31Q9H0C2 315 aa16.06■□□□□ 0.16
ACTN4-208ENST00000497637 PATZ1Q9HBE1 687 aaKnown RBP16.06■□□□□ 0.16
ACTN4-208ENST00000497637 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.06■□□□□ 0.16
ACTN4-208ENST00000497637 SESN1Q9Y6P5 492 aa16.06■□□□□ 0.16
ACTN4-208ENST00000497637 A0A1W2PPH5 198 aa16.05■□□□□ 0.16
ACTN4-208ENST00000497637 FAM24AA6NFZ4 105 aa16.05■□□□□ 0.16
ACTN4-208ENST00000497637 FAM90A9PA6NNJ1 464 aa16.05■□□□□ 0.16
ACTN4-208ENST00000497637 RBP4P02753 201 aa16.05■□□□□ 0.16
ACTN4-208ENST00000497637 PAX9P55771 341 aa16.05■□□□□ 0.16
ACTN4-208ENST00000497637 TREML4Q6UXN2 200 aa16.05■□□□□ 0.16
ACTN4-208ENST00000497637 ZNF833PQ6ZTB9 187 aa16.05■□□□□ 0.16
ACTN4-208ENST00000497637 H2BFWTQ7Z2G1 175 aa16.05■□□□□ 0.16
ACTN4-208ENST00000497637 BAP18Q8IXM2 172 aa16.05■□□□□ 0.16
ACTN4-208ENST00000497637 LINC01356Q8N9X3 169 aa16.05■□□□□ 0.16
ACTN4-208ENST00000497637 ZNF383Q8NA42 475 aa16.05■□□□□ 0.16
ACTN4-208ENST00000497637 LY6G5BQ8NDX9 201 aa16.05■□□□□ 0.16
ACTN4-208ENST00000497637 R3HDM4Q96D70 268 aa16.05■□□□□ 0.16
ACTN4-208ENST00000497637 BSCL2Q96G97 398 aaPredicted RBP16.05■□□□□ 0.16
ACTN4-208ENST00000497637 LYRM2Q9NU23 88 aaPredicted RBP16.05■□□□□ 0.16
ACTN4-208ENST00000497637 FBXL17Q9UF56 701 aa16.05■□□□□ 0.16
ACTN4-208ENST00000497637 SYNGR2O43760 224 aa16.04■□□□□ 0.16
ACTN4-208ENST00000497637 MED6O75586 246 aa16.04■□□□□ 0.16
ACTN4-208ENST00000497637 TMEM50AO95807 157 aa16.04■□□□□ 0.16
ACTN4-208ENST00000497637 IGHV1-8P0DP01 117 aa16.04■□□□□ 0.16
ACTN4-208ENST00000497637 EWSR1Q01844 656 aaKnown RBP eCLIP16.04■□□□□ 0.16
ACTN4-208ENST00000497637 FAM71F2Q6NXP2 309 aa16.04■□□□□ 0.16
ACTN4-208ENST00000497637 TMEM252Q8N6L7 170 aa16.04■□□□□ 0.16
ACTN4-208ENST00000497637 OR4S2Q8NH73 311 aa16.04■□□□□ 0.16
ACTN4-208ENST00000497637 SMIM8Q96KF7 97 aa16.04■□□□□ 0.16
ACTN4-208ENST00000497637 JMJD8Q96S16 334 aa16.04■□□□□ 0.16
ACTN4-208ENST00000497637 ZNF747Q9BV97 191 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms