RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 EPHA8P29322 1005 aaPredicted RBP10.99□□□□□ -0.65
GAPVD1-220ENST00000497580 LGALS4P56470 323 aa10.99□□□□□ -0.65
GAPVD1-220ENST00000497580 CLDN15P56746 228 aa10.99□□□□□ -0.65
GAPVD1-220ENST00000497580 Q0VG73 95 aa10.99□□□□□ -0.65
GAPVD1-220ENST00000497580 C1orf53Q5VUE5 145 aa10.99□□□□□ -0.65
GAPVD1-220ENST00000497580 FAM53AQ6NSI3 398 aaPredicted RBP10.99□□□□□ -0.65
GAPVD1-220ENST00000497580 SLC24A4Q8NFF2 622 aa10.99□□□□□ -0.65
GAPVD1-220ENST00000497580 ROS1P08922 2347 aa10.99□□□□□ -0.65
GAPVD1-220ENST00000497580 THADAQ6YHU6 1953 aa10.99□□□□□ -0.65
GAPVD1-220ENST00000497580 LRP5LA4QPB2 252 aa10.99□□□□□ -0.65
GAPVD1-220ENST00000497580 DEGS1O15121 323 aa10.99□□□□□ -0.65
GAPVD1-220ENST00000497580 ZNF841Q6ZN19 808 aa10.99□□□□□ -0.65
GAPVD1-220ENST00000497580 VASH2Q86V25 355 aa10.99□□□□□ -0.65
GAPVD1-220ENST00000497580 A0A1B0GX78 115 aa10.98□□□□□ -0.65
GAPVD1-220ENST00000497580 K7ERU9 68 aa10.98□□□□□ -0.65
GAPVD1-220ENST00000497580 ACTL6BO94805 426 aa10.98□□□□□ -0.65
GAPVD1-220ENST00000497580 LINC00205P59089 165 aa10.98□□□□□ -0.65
GAPVD1-220ENST00000497580 HEATR1Q9H583 2144 aaKnown RBP10.98□□□□□ -0.65
GAPVD1-220ENST00000497580 IGHV2-26A0A0B4J1V2 119 aa10.98□□□□□ -0.65
GAPVD1-220ENST00000497580 IGLC7A0M8Q6 106 aa10.98□□□□□ -0.65
GAPVD1-220ENST00000497580 ESDP10768 282 aa10.98□□□□□ -0.65
GAPVD1-220ENST00000497580 CA7P43166 264 aa10.98□□□□□ -0.65
GAPVD1-220ENST00000497580 FGF12P61328 243 aa10.98□□□□□ -0.65
GAPVD1-220ENST00000497580 CEACAM16Q2WEN9 425 aa10.98□□□□□ -0.65
GAPVD1-220ENST00000497580 FAM27BQ5VT28 67 aa10.98□□□□□ -0.65
GAPVD1-220ENST00000497580 NHLRC2Q8NBF2 726 aa10.98□□□□□ -0.65
GAPVD1-220ENST00000497580 TSKUQ8WUA8 353 aa10.98□□□□□ -0.65
GAPVD1-220ENST00000497580 CLEC5AQ9NY25 188 aa10.98□□□□□ -0.65
GAPVD1-220ENST00000497580 MRPS16Q9Y3D3 137 aaKnown RBP10.98□□□□□ -0.65
GAPVD1-220ENST00000497580 MUC21A0A0G2JKD1 596 aa10.98□□□□□ -0.65
GAPVD1-220ENST00000497580 MUC21A0A140T8X8 626 aa10.98□□□□□ -0.65
GAPVD1-220ENST00000497580 OR5B21A6NL26 309 aa10.98□□□□□ -0.65
GAPVD1-220ENST00000497580 MUC21Q5SSG8 566 aa10.98□□□□□ -0.65
GAPVD1-220ENST00000497580 YTHDF2Q9Y5A9 579 aaKnown RBP10.98□□□□□ -0.65
GAPVD1-220ENST00000497580 HS3ST3A1Q9Y663 406 aa10.98□□□□□ -0.65
GAPVD1-220ENST00000497580 A0A096LPE4 126 aa10.97□□□□□ -0.65
GAPVD1-220ENST00000497580 A0A1W2PPZ6 126 aa10.97□□□□□ -0.65
GAPVD1-220ENST00000497580 RRHO14718 337 aa10.97□□□□□ -0.65
GAPVD1-220ENST00000497580 PMCHL1Q16048 86 aa10.97□□□□□ -0.65
GAPVD1-220ENST00000497580 C10orf128Q5T292 105 aa10.97□□□□□ -0.65
GAPVD1-220ENST00000497580 SLC23A3Q6PIS1 610 aa10.97□□□□□ -0.65
GAPVD1-220ENST00000497580 MRPL21Q7Z2W9 205 aaKnown RBP10.97□□□□□ -0.65
GAPVD1-220ENST00000497580 DRAM1Q8N682 238 aa10.97□□□□□ -0.65
GAPVD1-220ENST00000497580 PLPPR2Q96GM1 343 aa10.97□□□□□ -0.65
GAPVD1-220ENST00000497580 MCRIP2Q9BUT9 160 aaKnown RBP10.97□□□□□ -0.65
GAPVD1-220ENST00000497580 SSBP3Q9BWW4 388 aaPredicted RBP10.97□□□□□ -0.65
GAPVD1-220ENST00000497580 OR2D2Q9H210 308 aa10.97□□□□□ -0.65
GAPVD1-220ENST00000497580 ZNF430Q9H8G1 570 aaPredicted RBP10.97□□□□□ -0.65
GAPVD1-220ENST00000497580 A0A1W2PPC4 97 aa10.97□□□□□ -0.65
GAPVD1-220ENST00000497580 TOX4O94842 621 aa10.97□□□□□ -0.65
GAPVD1-220ENST00000497580 FASLGP48023 281 aa10.97□□□□□ -0.65
GAPVD1-220ENST00000497580 RNPS1Q15287 305 aaKnown RBP10.97□□□□□ -0.65
GAPVD1-220ENST00000497580 ZIC4Q8N9L1 334 aa10.97□□□□□ -0.65
GAPVD1-220ENST00000497580 DEFB126Q9BYW3 111 aa10.97□□□□□ -0.65
GAPVD1-220ENST00000497580 FAM234AQ9H0X4 552 aa10.97□□□□□ -0.65
GAPVD1-220ENST00000497580 AKIRIN1Q9H9L7 192 aaPredicted RBP10.97□□□□□ -0.65
GAPVD1-220ENST00000497580 SNAI2O43623 268 aa10.97□□□□□ -0.65
GAPVD1-220ENST00000497580 CELA2AP08217 269 aa10.97□□□□□ -0.65
GAPVD1-220ENST00000497580 GPR6P46095 362 aaPredicted RBP10.97□□□□□ -0.65
GAPVD1-220ENST00000497580 PQLC2Q6ZP29 291 aa10.97□□□□□ -0.65
GAPVD1-220ENST00000497580 NAA38Q9BRA0 125 aaKnown RBP10.97□□□□□ -0.65
GAPVD1-220ENST00000497580 FSCN3Q9NQT6 498 aa10.97□□□□□ -0.65
GAPVD1-220ENST00000497580 DOCK10Q96BY6 2186 aa10.97□□□□□ -0.65
GAPVD1-220ENST00000497580 TRAV9-2A0A087WT02 112 aa10.96□□□□□ -0.65
GAPVD1-220ENST00000497580 GAGE12BA1L429 117 aa10.96□□□□□ -0.65
GAPVD1-220ENST00000497580 TNXAQ16473 311 aa10.96□□□□□ -0.65
GAPVD1-220ENST00000497580 SPATA31B1PQ5VZV4 182 aa10.96□□□□□ -0.65
GAPVD1-220ENST00000497580 TMEM42Q69YG0 159 aa10.96□□□□□ -0.65
GAPVD1-220ENST00000497580 ANKRD37Q7Z713 158 aa10.96□□□□□ -0.65
GAPVD1-220ENST00000497580 TMEM54Q969K7 222 aa10.96□□□□□ -0.65
GAPVD1-220ENST00000497580 BMPR1BO00238 502 aa10.96□□□□□ -0.65
GAPVD1-220ENST00000497580 PIAS2O75928 621 aa10.96□□□□□ -0.65
GAPVD1-220ENST00000497580 GP6Q9HCN6 339 aa10.96□□□□□ -0.65
GAPVD1-220ENST00000497580 hDV102S1A0JD36 115 aa10.96□□□□□ -0.66
GAPVD1-220ENST00000497580 USF1P22415 310 aaPredicted RBP10.96□□□□□ -0.66
GAPVD1-220ENST00000497580 CD1BP29016 333 aa10.96□□□□□ -0.66
GAPVD1-220ENST00000497580 PTGDSP41222 190 aa10.96□□□□□ -0.66
GAPVD1-220ENST00000497580 GNG4P50150 75 aa10.96□□□□□ -0.66
GAPVD1-220ENST00000497580 SELENOVP59797 346 aa10.96□□□□□ -0.66
GAPVD1-220ENST00000497580 AAED1Q7RTV5 226 aa10.96□□□□□ -0.66
GAPVD1-220ENST00000497580 H2BFWTQ7Z2G1 175 aa10.96□□□□□ -0.66
GAPVD1-220ENST00000497580 NEUROG1Q92886 237 aa10.96□□□□□ -0.66
GAPVD1-220ENST00000497580 FOXB1Q99853 325 aa10.96□□□□□ -0.66
GAPVD1-220ENST00000497580 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.96□□□□□ -0.66
GAPVD1-220ENST00000497580 CLEC1BQ9P126 229 aa10.96□□□□□ -0.66
GAPVD1-220ENST00000497580 MMP17Q9ULZ9 603 aa10.96□□□□□ -0.66
GAPVD1-220ENST00000497580 SH2D7A6NKC9 451 aaPredicted RBP10.95□□□□□ -0.66
GAPVD1-220ENST00000497580 M0R1X1 148 aa10.95□□□□□ -0.66
GAPVD1-220ENST00000497580 APCSP02743 223 aa10.95□□□□□ -0.66
GAPVD1-220ENST00000497580 LTC4SQ16873 150 aa10.95□□□□□ -0.66
GAPVD1-220ENST00000497580 CENPWQ5EE01 88 aa10.95□□□□□ -0.66
GAPVD1-220ENST00000497580 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.95□□□□□ -0.66
GAPVD1-220ENST00000497580 OR2M7Q8NG81 312 aa10.95□□□□□ -0.66
GAPVD1-220ENST00000497580 OR52L2PQ8NGH6 319 aa10.95□□□□□ -0.66
GAPVD1-220ENST00000497580 ABHD3Q8WU67 409 aa10.95□□□□□ -0.66
GAPVD1-220ENST00000497580 OR8B2Q96RD0 313 aa10.95□□□□□ -0.66
GAPVD1-220ENST00000497580 ASPMQ8IZT6 3477 aa10.95□□□□□ -0.66
GAPVD1-220ENST00000497580 C5orf67F2Z3F1 127 aa10.95□□□□□ -0.66
GAPVD1-220ENST00000497580 CAMPP49913 170 aa10.95□□□□□ -0.66
GAPVD1-220ENST00000497580 GABRA6Q16445 453 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms