RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, human

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF2-208	ENST00000496852	TMEM177	Q53S58	311 aa		11.18	□□□□□ -0.62
ATPAF2-208	ENST00000496852	SIGLECL1	Q8N7X8	197 aa		11.18	□□□□□ -0.62
ATPAF2-208	ENST00000496852	OR4S2	Q8NH73	311 aa		11.18	□□□□□ -0.62
ATPAF2-208	ENST00000496852	CD300LF	Q8TDQ1	290 aa		11.18	□□□□□ -0.62
ATPAF2-208	ENST00000496852	ZDHHC16	Q969W1	377 aa		11.18	□□□□□ -0.62
ATPAF2-208	ENST00000496852	EAF1	Q96JC9	268 aa	Predicted RBP	11.18	□□□□□ -0.62
ATPAF2-208	ENST00000496852		A0A0B4J2A0	478 aa		11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	HPRT1	P00492	218 aa		11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	MOS	P00540	346 aa		11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	IGHV4-59	P01825	116 aa		11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	CXCL3	P19876	107 aa		11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	LYZL2	Q7Z4W2	148 aa		11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	SELENOH	Q8IZQ5	122 aa	Known RBP	11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852		Q8N6K4	173 aa		11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	OR11H7	Q8NGC8	314 aa		11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	OR4C13	Q8NGP0	309 aa		11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	OR2T10	Q8NGZ9	312 aa		11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	LHFPL5	Q8TAF8	219 aa		11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	FLYWCH2	Q96CP2	140 aa	Known RBP	11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	RITA1	Q96K30	269 aa		11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	PLEKHA2	Q9HB19	425 aa		11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	SHPK	Q9UHJ6	478 aa		11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	S1PR2	O95136	353 aa		11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	CDS2	O95674	445 aa		11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	IGKV1-39	P01597	117 aa		11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	IGKV1D-39	P04432	117 aa		11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	FAM157C	P0CG43	387 aa		11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	FAM106CP	P0CH98	169 aa		11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	SULT1A3	P0DMM9	295 aa		11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	SULT1A4	P0DMN0	295 aa		11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	AKR1C2	P52895	323 aa		11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	GSG1L	Q6UXU4	331 aa		11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	SLC35G3	Q8N808	338 aa		11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	OSR1	Q8TAX0	266 aa	Predicted RBP	11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	CHAC2	Q8WUX2	184 aa		11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	RBPMS	Q93062	196 aa	Known RBP	11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	SEC22A	Q96IW7	307 aa		11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	RNF5	Q99942	180 aa		11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	TCF19	Q9Y242	345 aa		11.17	□□□□□ -0.62
ATPAF2-208	ENST00000496852	TRAPPC2	P0DI81	140 aa		11.16	□□□□□ -0.62
ATPAF2-208	ENST00000496852	TRAPPC2B	P0DI82	140 aa		11.16	□□□□□ -0.62
ATPAF2-208	ENST00000496852	TMEM11	P17152	192 aa		11.16	□□□□□ -0.62
ATPAF2-208	ENST00000496852	HES1	Q14469	280 aa		11.16	□□□□□ -0.62
ATPAF2-208	ENST00000496852	GGNBP1	Q5YKI7	109 aa		11.16	□□□□□ -0.62
ATPAF2-208	ENST00000496852	OR5R1	Q8NH85	324 aa		11.16	□□□□□ -0.62
ATPAF2-208	ENST00000496852	SSMEM1	Q8WWF3	244 aa		11.16	□□□□□ -0.62
ATPAF2-208	ENST00000496852	TMEM56	Q96MV1	263 aa		11.16	□□□□□ -0.62
ATPAF2-208	ENST00000496852	RAB18	Q9NP72	206 aa		11.16	□□□□□ -0.62
ATPAF2-208	ENST00000496852	COMMD9	Q9P000	198 aa		11.16	□□□□□ -0.62
ATPAF2-208	ENST00000496852	GSKIP	Q9P0R6	139 aa		11.16	□□□□□ -0.62
ATPAF2-208	ENST00000496852	TMEM56-RWDD3	S4R434	201 aa		11.16	□□□□□ -0.62
ATPAF2-208	ENST00000496852		A6NDX4	124 aa		11.15	□□□□□ -0.62
ATPAF2-208	ENST00000496852	SRRM4	A7MD48	611 aa	Known RBP	11.15	□□□□□ -0.62
ATPAF2-208	ENST00000496852	SHOX	O15266	292 aa		11.15	□□□□□ -0.62
ATPAF2-208	ENST00000496852	HOXA3	O43365	443 aa	Predicted RBP	11.15	□□□□□ -0.62
ATPAF2-208	ENST00000496852	ATG12	O94817	140 aa		11.15	□□□□□ -0.62
ATPAF2-208	ENST00000496852	KRAS	P01116	189 aa		11.15	□□□□□ -0.62
ATPAF2-208	ENST00000496852	IGLV2-23	P01705	113 aa		11.15	□□□□□ -0.62
ATPAF2-208	ENST00000496852	G6PC	P35575	357 aa		11.15	□□□□□ -0.62
ATPAF2-208	ENST00000496852	LGALS7	P47929	136 aa		11.15	□□□□□ -0.62
ATPAF2-208	ENST00000496852	RPS16	P62249	146 aa	Known RBP	11.15	□□□□□ -0.62
ATPAF2-208	ENST00000496852	HNF4G	Q14541	408 aa		11.15	□□□□□ -0.62
ATPAF2-208	ENST00000496852	SSX9	Q7RTT3	188 aa		11.15	□□□□□ -0.62
ATPAF2-208	ENST00000496852	LRTM2	Q8N967	370 aa		11.15	□□□□□ -0.62
ATPAF2-208	ENST00000496852	DMBX1	Q8NFW5	382 aa		11.15	□□□□□ -0.62
ATPAF2-208	ENST00000496852	RRNAD1	Q96FB5	475 aa	Known RBP	11.15	□□□□□ -0.62
ATPAF2-208	ENST00000496852	HARBI1	Q96MB7	349 aa		11.15	□□□□□ -0.62
ATPAF2-208	ENST00000496852	ZNF436	Q9C0F3	470 aa	Predicted RBP	11.15	□□□□□ -0.62
ATPAF2-208	ENST00000496852	RANGRF	Q9HD47	186 aa	Predicted RBP	11.15	□□□□□ -0.62
ATPAF2-208	ENST00000496852	CNTFR	P26992	372 aa		11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	ERVK-16	P61578	105 aa		11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	LY6E	Q16553	131 aa		11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	POU2AF1	Q16633	256 aa		11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	RBMS3	Q6XE24	437 aa	Known RBP	11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	OR5M8	Q8NGP6	311 aa		11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	IL22RA2	Q969J5	263 aa		11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	R3HDM4	Q96D70	268 aa		11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	PLSCR3	Q9NRY6	295 aa		11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	PITPNC1	Q9UKF7	332 aa		11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	POMT1	Q9Y6A1	747 aa		11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	CUBN	O60494	3623 aa		11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	PIGBOS1	A0A0B4J2F0	54 aa		11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	DBX1	A6NMT0	343 aa		11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	MPTX1	A8MV57	137 aa		11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	NDUFA3	O95167	84 aa		11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	HRAS	P01112	189 aa		11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	NQO2	P16083	231 aa		11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	F2RL1	P55085	397 aa		11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	CD300C	Q08708	224 aa		11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	IAH1	Q2TAA2	248 aa	Predicted RBP	11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	THOC7	Q6I9Y2	204 aa	Known RBP	11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	TMEM219	Q86XT9	240 aa		11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	VKORC1L1	Q8N0U8	176 aa		11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	TMEM86B	Q8N661	226 aa		11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	NPB	Q8NG41	125 aa		11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	RHOV	Q96L33	236 aa		11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	RBM14	Q96PK6	669 aa	Known RBP	11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	FYTTD1	Q96QD9	318 aa	Known RBP	11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	TSNAX	Q99598	290 aa	Known RBP	11.14	□□□□□ -0.63
ATPAF2-208	ENST00000496852	VPREB3	Q9UKI3	123 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms